CircNet

General Information

circRNA Basic Information

CircID	chr20:56368384\|56368546
Strand	+
CircType	exon
Host Gene	ENSG00000124098.9;
Algorism	CIRI2;
Sequence	CTCCTTGTCTTCTCCGGTTATTTTCTGTTTGGACCCCTGGCCACAGGAGTGGAGTGGGGTTGGGGCTTAGGAGAGAGCAATGTGGCTTTTTGGTATGATTTGTTTTATTGCTTGCCCGCTCAGCACGCTCCTGTTACTCCTAACAAAGTTTGAGATTTAAGCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:56368384\|56368546	hsa-miR-216a-5p	0	0	1
chr20:56368384\|56368546	hsa-miR-216a-3p	0	0	1
chr20:56368384\|56368546	hsa-miR-487a-5p	0	0	1
chr20:56368384\|56368546	hsa-miR-487a-3p	0	0	1
chr20:56368384\|56368546	hsa-miR-802	0	0	1
chr20:56368384\|56368546	hsa-miR-663b	0	0	1
chr20:56368384\|56368546	hsa-miR-1253	0	0	1
chr20:56368384\|56368546	hsa-miR-1258	0	0	1
chr20:56368384\|56368546	hsa-miR-615-5p	0	0	1
chr20:56368384\|56368546	hsa-miR-483-3p	0	0	1
chr20:56368384\|56368546	hsa-miR-371-5p	0	0	1
chr20:56368384\|56368546	hsa-miR-194	0	0	1
chr20:56368384\|56368546	hsa-miR-198	0	1	0
chr20:56368384\|56368546	hsa-miR-4286	0	1	0
chr20:56368384\|56368546	hsa-miR-4425	0	1	0
chr20:56368384\|56368546	hsa-miR-4767	1	0	0
chr20:56368384\|56368546	hsa-miR-4435	0	1	0
chr20:56368384\|56368546	hsa-miR-4655-5p	0	1	0
chr20:56368384\|56368546	hsa-miR-7110-3p	0	1	0
chr20:56368384\|56368546	hsa-miR-6845-3p	0	1	0
chr20:56368384\|56368546	hsa-miR-6793-3p	0	1	0
chr20:56368384\|56368546	hsa-miR-6768-3p	1	1	0
chr20:56368384\|56368546	hsa-miR-4649-5p	1	0	0
chr20:56368384\|56368546	hsa-miR-4723-5p	1	0	0
chr20:56368384\|56368546	hsa-miR-371a-5p	0	1	0
chr20:56368384\|56368546	hsa-miR-7-1-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:56368384\|56368546
ORF Type	ORF1
Protein Length	42
Nucleotide Length	129
Protein Sequence	MFGPLATGVEWGWGLGESNVAFWYDLFYCLPAQHAPVTPNKV
Nucleotide Sequence	CTGTTTGGACCCCTGGCCACAGGAGTGGAGTGGGGTTGGGGCTTAGGAGAGAGCAATGTGGCTTTTTGGTATGATTTGTTTTATTGCTTGCCCGCTCAGCACGCTCCTGTTACTCCTAACAAAGTTTGA

CircID	chr20:56368384\|56368546
ORF Type	ORF2
Protein Length	26
Nucleotide Length	81
Protein Sequence	MWLFGMICFIACPLSTLLLLLTKFEI
Nucleotide Sequence	ATGTGGCTTTTTGGTATGATTTGTTTTATTGCTTGCCCGCTCAGCACGCTCCTGTTACTCCTAACAAAGTTTGAGATTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information