CircRNA Information

General Information
circRNA Basic Information
CircID chr20:56516957|56517201
Strand +
CircType exon
Host Gene ENSG00000022277.11;
Algorism CIRI2;
Sequence CTGTGCTTTTGGGAGCCAAGTTGGTTTTCTTCTCTCTAGAATCAAGGCTGGCTTCTTCAGGCTTCCCTGTCTTAACTTTTGATGGCCCTGGGGCTTCTTCACTGACATCTGGTTTTGAAACAGACTCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:56516957|56517201 hsa-miR-208a-5p 0 0 1
chr20:56516957|56517201 hsa-miR-208a-3p 0 0 1
chr20:56516957|56517201 hsa-miR-223-5p 0 0 1
chr20:56516957|56517201 hsa-miR-223-3p 0 0 1
chr20:56516957|56517201 hsa-miR-150-5p 0 0 1
chr20:56516957|56517201 hsa-miR-150-3p 0 0 1
chr20:56516957|56517201 hsa-miR-607 0 0 1
chr20:56516957|56517201 hsa-miR-641 0 0 1
chr20:56516957|56517201 hsa-miR-1323 0 0 1
chr20:56516957|56517201 hsa-miR-208b-5p 0 0 1
chr20:56516957|56517201 hsa-miR-208b-3p 0 0 1
chr20:56516957|56517201 hsa-miR-1253 0 1 1
chr20:56516957|56517201 hsa-miR-548o-3p 0 0 1
chr20:56516957|56517201 hsa-miR-548o 0 0 1
chr20:56516957|56517201 hsa-miR-671-5p 1 1 1
chr20:56516957|56517201 hsa-miR-518d-5p 0 1 1
chr20:56516957|56517201 hsa-miR-519b-5p 0 1 1
chr20:56516957|56517201 hsa-miR-519c-5p 0 1 1
chr20:56516957|56517201 hsa-miR-520c-5p 0 1 1
chr20:56516957|56517201 hsa-miR-526a 0 0 1
chr20:56516957|56517201 hsa-miR-499-5p 0 0 1
chr20:56516957|56517201 hsa-miR-3185 0 1 0
chr20:56516957|56517201 hsa-miR-4323 0 1 0
chr20:56516957|56517201 hsa-miR-3916 0 1 0
chr20:56516957|56517201 hsa-miR-3918 1 1 0
chr20:56516957|56517201 hsa-miR-3976 0 1 0
chr20:56516957|56517201 hsa-miR-6079 0 1 0
chr20:56516957|56517201 hsa-miR-8063 0 1 0
chr20:56516957|56517201 hsa-miR-659-3p 1 0 0
chr20:56516957|56517201 hsa-miR-4697-3p 1 0 0
chr20:56516957|56517201 hsa-miR-5008-5p 1 0 0
chr20:56516957|56517201 hsa-miR-4786-3p 1 1 0
chr20:56516957|56517201 hsa-miR-4640-5p 1 0 0
chr20:56516957|56517201 hsa-miR-6753-5p 1 0 0
chr20:56516957|56517201 hsa-miR-516b-5p 0 1 0
chr20:56516957|56517201 hsa-miR-6895-5p 0 1 0
chr20:56516957|56517201 hsa-miR-4529-5p 0 1 0
chr20:56516957|56517201 hsa-miR-1207-5p 1 1 0
chr20:56516957|56517201 hsa-miR-4685-5p 1 1 0
chr20:56516957|56517201 hsa-miR-4726-5p 1 0 0
chr20:56516957|56517201 hsa-miR-1266-5p 1 0 0
chr20:56516957|56517201 hsa-miR-10396a-3p 1 0 0
chr20:56516957|56517201 hsa-miR-6762-5p 1 0 0
chr20:56516957|56517201 hsa-miR-518e-5p 0 1 0
chr20:56516957|56517201 hsa-miR-518f-5p 0 1 0
chr20:56516957|56517201 hsa-miR-519a-5p 0 1 0
chr20:56516957|56517201 hsa-miR-522-5p 0 1 0
chr20:56516957|56517201 hsa-miR-523-5p 0 1 0
chr20:56516957|56517201 hsa-miR-526a-5p 0 1 0
chr20:56516957|56517201 hsa-miR-6837-5p 1 1 0
chr20:56516957|56517201 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:56516957|56517201
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MGAKLVFFSLESRLASSGFPVLTFDGPGASSLTSGFETDS
Nucleotide Sequence TTGGGAGCCAAGTTGGTTTTCTTCTCTCTAGAATCAAGGCTGGCTTCTTCAGGCTTCCCTGTCTTAACTTTTGATGGCCCTGGGGCTTCTTCACTGACATCTGGTTTTGAAACAGACTCT

CircID chr20:56516957|56517201
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MFQNQMSVKKPQGHQKLRQGSLKKPALILERRKPTWLPKAQ
Nucleotide Sequence CTGTTTCAAAACCAGATGTCAGTGAAGAAGCCCCAGGGCCATCAAAAGTTAAGACAGGGAAGCCTGAAGAAGCCAGCCTTGATTCTAGAGAGAAGAAAACCAACTTGGCTCCCAAAAGCACAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites