CircRNA Information

General Information
circRNA Basic Information
CircID chr20:57651941|57652220
Strand +
CircType exon
Host Gene ENSG00000124225.14;
Algorism CIRI2;
Sequence AGCGAGGTCATCGGCCACTACCCGGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCCGCCCTCCTTGCTGGAGGGGACCCGGCTCCACCACACACACATCGCGCCCCTAGAGAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAACAGAAAGGACACCCTCTCTAGGGTCCCCAGGGGGGCCGGGCTGGGGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGGGGCGCAGCAACGCATCGTGTGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:57651941|57652220 hsa-miR-122-5p 0 0 1
chr20:57651941|57652220 hsa-miR-122-3p 0 0 1
chr20:57651941|57652220 hsa-miR-604 0 0 1
chr20:57651941|57652220 hsa-miR-647 0 1 1
chr20:57651941|57652220 hsa-miR-766-5p 0 0 1
chr20:57651941|57652220 hsa-miR-766-3p 0 0 1
chr20:57651941|57652220 hsa-miR-942-5p 0 0 1
chr20:57651941|57652220 hsa-miR-942-3p 0 0 1
chr20:57651941|57652220 hsa-miR-1237-5p 0 0 1
chr20:57651941|57652220 hsa-miR-1237-3p 0 0 1
chr20:57651941|57652220 hsa-miR-1287-5p 0 0 1
chr20:57651941|57652220 hsa-miR-1287-3p 0 0 1
chr20:57651941|57652220 hsa-miR-1248 0 0 1
chr20:57651941|57652220 hsa-miR-1251-5p 0 0 1
chr20:57651941|57652220 hsa-miR-1251-3p 0 0 1
chr20:57651941|57652220 hsa-miR-501-5p 0 0 1
chr20:57651941|57652220 hsa-miR-331-3p 0 1 1
chr20:57651941|57652220 hsa-miR-338-3p 0 0 1
chr20:57651941|57652220 hsa-miR-483-3p 0 1 1
chr20:57651941|57652220 hsa-miR-362-5p 0 0 1
chr20:57651941|57652220 hsa-miR-644 0 0 1
chr20:57651941|57652220 hsa-miR-138 0 0 1
chr20:57651941|57652220 hsa-miR-147 0 0 1
chr20:57651941|57652220 hsa-miR-611 1 0 0
chr20:57651941|57652220 hsa-miR-637 1 0 0
chr20:57651941|57652220 hsa-miR-1303 0 1 0
chr20:57651941|57652220 hsa-miR-1268a 1 0 0
chr20:57651941|57652220 hsa-miR-3141 1 0 0
chr20:57651941|57652220 hsa-miR-3196 1 0 0
chr20:57651941|57652220 hsa-miR-4297 0 1 0
chr20:57651941|57652220 hsa-miR-3909 1 0 0
chr20:57651941|57652220 hsa-miR-3937 1 0 0
chr20:57651941|57652220 hsa-miR-1268b 1 0 0
chr20:57651941|57652220 hsa-miR-4488 1 0 0
chr20:57651941|57652220 hsa-miR-4533 1 1 0
chr20:57651941|57652220 hsa-miR-3960 1 0 0
chr20:57651941|57652220 hsa-miR-4682 1 0 0
chr20:57651941|57652220 hsa-miR-4706 1 0 0
chr20:57651941|57652220 hsa-miR-4739 1 0 0
chr20:57651941|57652220 hsa-miR-4751 0 1 0
chr20:57651941|57652220 hsa-miR-5572 1 0 0
chr20:57651941|57652220 hsa-miR-7706 0 1 0
chr20:57651941|57652220 hsa-miR-7974 1 0 0
chr20:57651941|57652220 hsa-miR-8089 0 1 0
chr20:57651941|57652220 hsa-miR-11400 1 0 0
chr20:57651941|57652220 hsa-miR-12118 0 1 0
chr20:57651941|57652220 hsa-miR-138-5p 1 1 0
chr20:57651941|57652220 hsa-miR-370-3p 1 0 0
chr20:57651941|57652220 hsa-miR-4731-5p 1 0 0
chr20:57651941|57652220 hsa-miR-3194-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6747-3p 1 1 0
chr20:57651941|57652220 hsa-miR-7106-5p 1 0 0
chr20:57651941|57652220 hsa-miR-3692-5p 1 1 0
chr20:57651941|57652220 hsa-miR-6804-5p 0 1 0
chr20:57651941|57652220 hsa-miR-6089 1 0 0
chr20:57651941|57652220 hsa-miR-1225-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6867-5p 0 1 0
chr20:57651941|57652220 hsa-miR-3677-5p 0 1 0
chr20:57651941|57652220 hsa-miR-6741-5p 1 0 0
chr20:57651941|57652220 hsa-miR-6762-3p 1 0 0
chr20:57651941|57652220 hsa-miR-191-3p 1 0 0
chr20:57651941|57652220 hsa-miR-8069 1 0 0
chr20:57651941|57652220 hsa-miR-3663-5p 1 0 0
chr20:57651941|57652220 hsa-miR-3180-3p 1 0 0
chr20:57651941|57652220 hsa-miR-6805-5p 1 0 0
chr20:57651941|57652220 hsa-miR-4753-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6852-5p 0 1 0
chr20:57651941|57652220 hsa-miR-6803-3p 1 1 0
chr20:57651941|57652220 hsa-miR-652-5p 1 1 0
chr20:57651941|57652220 hsa-miR-3667-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6809-3p 0 1 0
chr20:57651941|57652220 hsa-miR-7111-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6739-3p 0 1 0
chr20:57651941|57652220 hsa-miR-149-3p 1 0 0
chr20:57651941|57652220 hsa-miR-6789-5p 1 1 0
chr20:57651941|57652220 hsa-miR-7152-3p 1 0 0
chr20:57651941|57652220 hsa-miR-1250-5p 1 0 0
chr20:57651941|57652220 hsa-miR-2355-3p 0 1 0
chr20:57651941|57652220 hsa-miR-519d-5p 0 1 0
chr20:57651941|57652220 hsa-miR-4746-3p 1 0 0
chr20:57651941|57652220 hsa-miR-3940-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6886-3p 1 0 0
chr20:57651941|57652220 hsa-miR-6738-3p 1 1 0
chr20:57651941|57652220 hsa-miR-6880-3p 1 1 0
chr20:57651941|57652220 hsa-miR-6734-3p 1 1 0
chr20:57651941|57652220 hsa-miR-3144-5p 0 1 0
chr20:57651941|57652220 hsa-miR-5587-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6761-3p 0 1 0
chr20:57651941|57652220 hsa-miR-517-5p 0 1 0
chr20:57651941|57652220 hsa-miR-10400-5p 1 0 0
chr20:57651941|57652220 hsa-miR-6816-5p 1 0 0
chr20:57651941|57652220 hsa-miR-1343-5p 1 0 0
chr20:57651941|57652220 hsa-miR-1249-5p 1 0 0
chr20:57651941|57652220 hsa-miR-6779-5p 1 0 0
chr20:57651941|57652220 hsa-miR-6797-5p 1 0 0
chr20:57651941|57652220 hsa-miR-320a-5p 0 1 0
chr20:57651941|57652220 hsa-miR-328-5p 1 0 0
chr20:57651941|57652220 hsa-miR-10394-3p 0 1 0
chr20:57651941|57652220 hsa-miR-5008-3p 1 0 0
chr20:57651941|57652220 hsa-miR-4700-5p 0 1 0
chr20:57651941|57652220 hsa-miR-324-3p 0 1 0
chr20:57651941|57652220 hsa-miR-3173-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6891-5p 0 1 0
chr20:57651941|57652220 hsa-miR-6785-5p 1 0 0
chr20:57651941|57652220 hsa-miR-4667-5p 0 1 0
chr20:57651941|57652220 hsa-miR-6791-5p 0 1 0
chr20:57651941|57652220 hsa-miR-7107-3p 0 1 0
chr20:57651941|57652220 hsa-miR-6805-3p 1 0 0
chr20:57651941|57652220 hsa-miR-10392-3p 0 1 0
chr20:57651941|57652220 hsa-miR-4756-5p 1 1 0
chr20:57651941|57652220 hsa-miR-3619-5p 0 1 0
chr20:57651941|57652220 hsa-miR-494-5p 1 0 0
chr20:57651941|57652220 hsa-miR-3059-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:57651941|57652220
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MLEGTRLHHTHIAPLESAAIWSKEKDKQKGHPL
Nucleotide Sequence TTGCTGGAGGGGACCCGGCTCCACCACACACACATCGCGCCCCTAGAGAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAACAGAAAGGACACCCTCTCTAG
CircID chr20:57651941|57652220
ORF Type ORF2
Protein Length 87
Nucleotide Length 264
Protein Sequence MRCCAPRLPLTPLLRSAECSAFSPTQPQPGPPGDPREGVLSVYPSLCSRWLRSLGARCVCGGAGSPPARRAAHCSAGAGRRTPGSGR
Nucleotide Sequence ATGCGTTGCTGCGCCCCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCACCTACGCAGCCCCAGCCCGGCCCCCCTGGGGACCCTAGAGAGGGTGTCCTTTCTGTTTATCCTTCTCTTTGCTCCAGATGGCTGCGCTCTCTAGGGGCGCGATGTGTGTGTGGTGGAGCCGGGTCCCCTCCAGCAAGGAGGGCGGCCCACTGCTCTGCTGGTGCTGGAAGGAGGACCCCGGGTAGTGGCCGATGA
CircID chr20:57651941|57652220
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MPFHLRSPSPAPLGTLERVSFLFILLFAPDGCAL
Nucleotide Sequence CTGCCTTTTCACCTACGCAGCCCCAGCCCGGCCCCCCTGGGGACCCTAGAGAGGGTGTCCTTTCTGTTTATCCTTCTCTTTGCTCCAGATGGCTGCGCTCTCTAG
CircID chr20:57651941|57652220
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MLRPPPSSHSSSKKRGVFCLFTYAAPARPPWGP
Nucleotide Sequence TTGCTGCGCCCCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCACCTACGCAGCCCCAGCCCGGCCCCCCTGGGGACCCTAG
CircID chr20:57651941|57652220
ORF Type ORF5
Protein Length 38
Nucleotide Length 117
Protein Sequence MLQMAALSRGAMCVWWSRVPSSKEGGPLLCWCWKEDPG
Nucleotide Sequence TTGCTCCAGATGGCTGCGCTCTCTAGGGGCGCGATGTGTGTGTGGTGGAGCCGGGTCCCCTCCAGCAAGGAGGGCGGCCCACTGCTCTGCTGGTGCTGGAAGGAGGACCCCGGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab