CircRNA Information

General Information
circRNA Basic Information
CircID chr20:58910039|58910710
Strand +
CircType exon
Host Gene ENSG00000087460.22;
Algorism CIRI2;
Sequence GCCCATCTCCACTGGCAGTGCTGATCCTCAGAAACTCATCTCGAATGAAGTACTTGGCCCGGGTCACGCGTGGGTCCTCTCCGGGCTCGGGAGTAGCTATATAAAAAGGGAATACATATTAATGTAATTTAAAATTCAAGCAGAGCTGGGGTGCTAGCATCTCTGTAGCTCCTGAAGTCTTCAAAACCCTGATTTTTCCATATGAGAATTAGTGGGAGTGCGTTTTTCTTGCTTCTCTTATAGATCCTTTATGGTTTGGTGGTGGGAGGGGGATGGGGGTTTTCAGCCTGACCGTTTGAAAAAGAACCACCGCAATGAACAGCCAGCAAGAGTGGAAGCCATACACACCATCCTCAGGAGTAGTGTAGCGAGCAAATTCTGGAAAGTAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:58910039|58910710 hsa-miR-29a-5p 0 0 1
chr20:58910039|58910710 hsa-miR-29a-3p 0 0 1
chr20:58910039|58910710 hsa-miR-204-5p 0 0 1
chr20:58910039|58910710 hsa-miR-204-3p 0 0 1
chr20:58910039|58910710 hsa-miR-211-5p 0 0 1
chr20:58910039|58910710 hsa-miR-211-3p 0 0 1
chr20:58910039|58910710 hsa-miR-143-5p 0 0 1
chr20:58910039|58910710 hsa-miR-143-3p 0 0 1
chr20:58910039|58910710 hsa-miR-29c-5p 0 0 1
chr20:58910039|58910710 hsa-miR-29c-3p 0 0 1
chr20:58910039|58910710 hsa-miR-135b-5p 0 0 1
chr20:58910039|58910710 hsa-miR-135b-3p 0 0 1
chr20:58910039|58910710 hsa-miR-484 1 0 1
chr20:58910039|58910710 hsa-miR-553 0 0 1
chr20:58910039|58910710 hsa-miR-570-5p 0 0 1
chr20:58910039|58910710 hsa-miR-570-3p 0 0 1
chr20:58910039|58910710 hsa-miR-607 0 0 1
chr20:58910039|58910710 hsa-miR-620 0 0 1
chr20:58910039|58910710 hsa-miR-621 0 1 1
chr20:58910039|58910710 hsa-miR-623 0 0 1
chr20:58910039|58910710 hsa-miR-630 0 0 1
chr20:58910039|58910710 hsa-miR-1298-5p 0 0 1
chr20:58910039|58910710 hsa-miR-1298-3p 0 0 1
chr20:58910039|58910710 hsa-miR-889-5p 0 0 1
chr20:58910039|58910710 hsa-miR-889-3p 0 0 1
chr20:58910039|58910710 hsa-miR-708-5p 0 0 1
chr20:58910039|58910710 hsa-miR-708-3p 0 0 1
chr20:58910039|58910710 hsa-miR-1200 0 0 1
chr20:58910039|58910710 hsa-miR-1206 0 0 1
chr20:58910039|58910710 hsa-miR-1305 0 0 1
chr20:58910039|58910710 hsa-miR-1270 0 0 1
chr20:58910039|58910710 hsa-miR-615-3p 0 1 1
chr20:58910039|58910710 hsa-miR-532-3p 0 1 1
chr20:58910039|58910710 hsa-miR-525-5p 0 0 1
chr20:58910039|58910710 hsa-miR-1224-3p 0 0 1
chr20:58910039|58910710 hsa-miR-28-5p 0 1 1
chr20:58910039|58910710 hsa-miR-876-3p 0 0 1
chr20:58910039|58910710 hsa-miR-520a-5p 0 0 1
chr20:58910039|58910710 hsa-miR-521 0 1 1
chr20:58910039|58910710 hsa-miR-590-3p 0 0 1
chr20:58910039|58910710 hsa-miR-548c-3p 0 0 1
chr20:58910039|58910710 hsa-miR-220b 0 0 1
chr20:58910039|58910710 hsa-miR-1260 0 0 1
chr20:58910039|58910710 hsa-miR-1280 0 0 1
chr20:58910039|58910710 hsa-miR-323-3p 0 0 1
chr20:58910039|58910710 hsa-miR-135a 0 0 1
chr20:58910039|58910710 hsa-miR-29b 0 0 1
chr20:58910039|58910710 hsa-miR-1185 0 0 1
chr20:58910039|58910710 hsa-miR-572 1 0 0
chr20:58910039|58910710 hsa-miR-608 1 0 0
chr20:58910039|58910710 hsa-miR-663b 1 0 0
chr20:58910039|58910710 hsa-miR-1538 1 0 0
chr20:58910039|58910710 hsa-miR-544b 0 1 0
chr20:58910039|58910710 hsa-miR-3139 0 1 0
chr20:58910039|58910710 hsa-miR-548v 0 1 0
chr20:58910039|58910710 hsa-miR-1260b 0 1 0
chr20:58910039|58910710 hsa-miR-4301 0 1 0
chr20:58910039|58910710 hsa-miR-3686 0 1 0
chr20:58910039|58910710 hsa-miR-451b 0 1 0
chr20:58910039|58910710 hsa-miR-5092 0 1 0
chr20:58910039|58910710 hsa-miR-8087 0 1 0
chr20:58910039|58910710 hsa-miR-8089 1 0 0
chr20:58910039|58910710 hsa-miR-12115 0 1 0
chr20:58910039|58910710 hsa-miR-4687-3p 1 0 0
chr20:58910039|58910710 hsa-miR-4708-5p 0 1 0
chr20:58910039|58910710 hsa-miR-6892-3p 1 1 0
chr20:58910039|58910710 hsa-miR-6089 1 0 0
chr20:58910039|58910710 hsa-miR-4653-3p 0 1 0
chr20:58910039|58910710 hsa-miR-3064-5p 1 1 0
chr20:58910039|58910710 hsa-miR-8069 1 0 0
chr20:58910039|58910710 hsa-miR-3605-5p 0 1 0
chr20:58910039|58910710 hsa-miR-4713-5p 1 1 0
chr20:58910039|58910710 hsa-miR-3944-3p 1 0 0
chr20:58910039|58910710 hsa-miR-193b-5p 1 1 0
chr20:58910039|58910710 hsa-miR-4640-5p 1 0 0
chr20:58910039|58910710 hsa-miR-3127-5p 1 0 0
chr20:58910039|58910710 hsa-miR-5580-5p 0 1 0
chr20:58910039|58910710 hsa-miR-6823-5p 1 1 0
chr20:58910039|58910710 hsa-miR-4756-3p 0 1 0
chr20:58910039|58910710 hsa-miR-4715-5p 1 0 0
chr20:58910039|58910710 hsa-miR-6828-5p 0 1 0
chr20:58910039|58910710 hsa-miR-6877-5p 1 0 0
chr20:58910039|58910710 hsa-miR-664b-5p 1 0 0
chr20:58910039|58910710 hsa-miR-2115-5p 0 1 0
chr20:58910039|58910710 hsa-miR-3158-3p 1 0 0
chr20:58910039|58910710 hsa-miR-3180-5p 0 1 0
chr20:58910039|58910710 hsa-miR-1180-5p 0 1 0
chr20:58910039|58910710 hsa-miR-383-3p 1 1 0
chr20:58910039|58910710 hsa-miR-3940-3p 0 1 0
chr20:58910039|58910710 hsa-miR-6777-3p 0 1 0
chr20:58910039|58910710 hsa-miR-1292-3p 1 0 0
chr20:58910039|58910710 hsa-miR-6798-3p 0 1 0
chr20:58910039|58910710 hsa-miR-6729-3p 0 1 0
chr20:58910039|58910710 hsa-miR-3156-3p 0 1 0
chr20:58910039|58910710 hsa-miR-4745-3p 0 1 0
chr20:58910039|58910710 hsa-miR-6858-5p 1 0 0
chr20:58910039|58910710 hsa-miR-4633-3p 0 1 0
chr20:58910039|58910710 hsa-miR-1199-5p 1 0 0
chr20:58910039|58910710 hsa-miR-10398-3p 0 1 0
chr20:58910039|58910710 hsa-miR-3679-5p 1 0 0
chr20:58910039|58910710 hsa-miR-520f-3p 0 1 0
chr20:58910039|58910710 hsa-miR-323b-5p 1 0 0
chr20:58910039|58910710 hsa-miR-373-3p 0 1 0
chr20:58910039|58910710 hsa-miR-4769-3p 1 0 0
chr20:58910039|58910710 hsa-miR-6771-3p 0 1 0
chr20:58910039|58910710 hsa-miR-200c-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:58910039|58910710
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MVWWWEGDGGFQPDRLKKNHRNEQPARVEAIHTILRSSVASKFWKVV
Nucleotide Sequence ATGGTTTGGTGGTGGGAGGGGGATGGGGGTTTTCAGCCTGACCGTTTGAAAAAGAACCACCGCAATGAACAGCCAGCAAGAGTGGAAGCCATACACACCATCCTCAGGAGTAGTGTAGCGAGCAAATTCTGGAAAGTAGTC

CircID chr20:58910039|58910710
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MAVLILRNSSRMKYLARVTRGSSPGSGVAI
Nucleotide Sequence CTGGCAGTGCTGATCCTCAGAAACTCATCTCGAATGAAGTACTTGGCCCGGGTCACGCGTGGGTCCTCTCCGGGCTCGGGAGTAGCTATATAA

CircID chr20:58910039|58910710
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MFIAVVLFQTVRLKTPIPLPPPNHKGSIREARKTHSH
Nucleotide Sequence CTGTTCATTGCGGTGGTTCTTTTTCAAACGGTCAGGCTGAAAACCCCCATCCCCCTCCCACCACCAAACCATAAAGGATCTATAAGAGAAGCAAGAAAAACGCACTCCCACTAA

CircID chr20:58910039|58910710
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MLATLLLRMVCMASTLAGCSLRWFFFKRSG
Nucleotide Sequence TTGCTCGCTACACTACTCCTGAGGATGGTGTGTATGGCTTCCACTCTTGCTGGCTGTTCATTGCGGTGGTTCTTTTTCAAACGGTCAGGCTGA

CircID chr20:58910039|58910710
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MLAVHCGGSFSNGQAENPHPPPTTKP
Nucleotide Sequence TTGCTGGCTGTTCATTGCGGTGGTTCTTTTTCAAACGGTCAGGCTGAAAACCCCCATCCCCCTCCCACCACCAAACCATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites