CircNet

General Information

circRNA Basic Information

CircID	chr20:58994861\|58994967
Strand	+
CircType	exon
Host Gene	ENSG00000101158.11;
Algorism	CIRI2;
Sequence	GGCCAGATCTGTCCTGAGGGGTCGTGGGAGCCCAGCGCCTGCCTTGAGGGAAATGAACACTGAAAACAGGATTTGGGAGCAGTATTGGATTGACAGCAGAGAAGGGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:58994861\|58994967	hsa-miR-200b-5p	0	0	1
chr20:58994861\|58994967	hsa-miR-200b-3p	0	0	1
chr20:58994861\|58994967	hsa-miR-150-5p	0	0	1
chr20:58994861\|58994967	hsa-miR-150-3p	0	0	1
chr20:58994861\|58994967	hsa-miR-200c-5p	0	0	1
chr20:58994861\|58994967	hsa-miR-200c-3p	0	0	1
chr20:58994861\|58994967	hsa-miR-429	0	0	1
chr20:58994861\|58994967	hsa-miR-579-5p	0	0	1
chr20:58994861\|58994967	hsa-miR-579-3p	0	0	1
chr20:58994861\|58994967	hsa-miR-626	0	0	1
chr20:58994861\|58994967	hsa-miR-662	0	0	1
chr20:58994861\|58994967	hsa-miR-940	1	1	1
chr20:58994861\|58994967	hsa-miR-942-5p	0	0	1
chr20:58994861\|58994967	hsa-miR-942-3p	0	0	1
chr20:58994861\|58994967	hsa-miR-1206	0	0	1
chr20:58994861\|58994967	hsa-miR-532-3p	1	1	1
chr20:58994861\|58994967	hsa-miR-642	0	0	1
chr20:58994861\|58994967	hsa-miR-3714	0	1	0
chr20:58994861\|58994967	hsa-miR-4767	1	0	0
chr20:58994861\|58994967	hsa-miR-6071	0	1	0
chr20:58994861\|58994967	hsa-miR-9899	1	0	0
chr20:58994861\|58994967	hsa-miR-103a-2-5p	1	0	0
chr20:58994861\|58994967	hsa-miR-3692-5p	1	0	0
chr20:58994861\|58994967	hsa-miR-6089	1	0	0
chr20:58994861\|58994967	hsa-miR-6728-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-6772-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-2115-5p	1	1	0
chr20:58994861\|58994967	hsa-miR-7106-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-6499-3p	0	1	0
chr20:58994861\|58994967	hsa-miR-3158-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-6828-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-5000-3p	0	1	0
chr20:58994861\|58994967	hsa-miR-4763-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-6893-5p	0	1	0
chr20:58994861\|58994967	hsa-miR-6813-5p	1	0	0
chr20:58994861\|58994967	hsa-miR-6808-5p	0	1	0
chr20:58994861\|58994967	hsa-miR-320a-5p	1	0	0
chr20:58994861\|58994967	hsa-miR-1909-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-5008-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-10400-3p	0	1	0
chr20:58994861\|58994967	hsa-miR-6827-3p	1	0	0
chr20:58994861\|58994967	hsa-miR-103a-1-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:58994861\|58994967
ORF Type	ORF1
Protein Length	31
Nucleotide Length	93
Protein Sequence	MRGRGSPAPALREMNTENRIWEQYWIDSREG
Nucleotide Sequence	CTGAGGGGTCGTGGGAGCCCAGCGCCTGCCTTGAGGGAAATGAACACTGAAAACAGGATTTGGGAGCAGTATTGGATTGACAGCAGAGAAGGG

CircID	chr20:58994861\|58994967
ORF Type	ORF2
Protein Length	27
Nucleotide Length	81
Protein Sequence	MLPNPVFSVHFPQGRRWAPTTPQDRSG
Nucleotide Sequence	CTGCTCCCAAATCCTGTTTTCAGTGTTCATTTCCCTCAAGGCAGGCGCTGGGCTCCCACGACCCCTCAGGACAGATCTGGC

CircID	chr20:58994861\|58994967
ORF Type	ORF3
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLSIQYCSQILFSVFISLKAGAGLPRPLRTDLA
Nucleotide Sequence	CTGCTGTCAATCCAATACTGCTCCCAAATCCTGTTTTCAGTGTTCATTTCCCTCAAGGCAGGCGCTGGGCTCCCACGACCCCTCAGGACAGATCTGGCC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information