CircRNA Information

General Information
circRNA Basic Information
CircID chr20:6215197|6215351
Strand +
CircType exon
Host Gene ENSG00000234241.1;
Algorism CIRI2;
Sequence CCCTTTTCCCTGCCCGCGGCCTCTTTGTTGTTGGGCACCTCCTCTCGCACCTCGAACGCCTCTTGCTGATCCAGGTCCTCCTCTCTGTGAATAACCGGCTCTACCACGGGGAAGAGCAGCCCCACGACCTCTGGATGGAGCAGCACCCCTTGCTC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:6215197|6215351 hsa-miR-27a-5p 0 0 1
chr20:6215197|6215351 hsa-miR-27a-3p 0 0 1
chr20:6215197|6215351 hsa-miR-27b-5p 0 0 1
chr20:6215197|6215351 hsa-miR-27b-3p 0 0 1
chr20:6215197|6215351 hsa-miR-379-5p 0 0 1
chr20:6215197|6215351 hsa-miR-379-3p 0 0 1
chr20:6215197|6215351 hsa-miR-492 0 1 1
chr20:6215197|6215351 hsa-miR-545-5p 0 0 1
chr20:6215197|6215351 hsa-miR-545-3p 0 0 1
chr20:6215197|6215351 hsa-miR-583 0 0 1
chr20:6215197|6215351 hsa-miR-619-5p 0 0 1
chr20:6215197|6215351 hsa-miR-619-3p 0 0 1
chr20:6215197|6215351 hsa-miR-631 0 0 1
chr20:6215197|6215351 hsa-miR-1236-5p 0 0 1
chr20:6215197|6215351 hsa-miR-1236-3p 0 0 1
chr20:6215197|6215351 hsa-miR-525-5p 0 0 1
chr20:6215197|6215351 hsa-miR-513a-5p 0 0 1
chr20:6215197|6215351 hsa-miR-1207-5p 0 1 1
chr20:6215197|6215351 hsa-miR-342-5p 0 1 1
chr20:6215197|6215351 hsa-miR-520a-5p 0 0 1
chr20:6215197|6215351 hsa-miR-665 1 0 0
chr20:6215197|6215351 hsa-miR-2861 1 0 0
chr20:6215197|6215351 hsa-miR-3132 1 0 0
chr20:6215197|6215351 hsa-miR-3141 1 0 0
chr20:6215197|6215351 hsa-miR-3188 1 0 0
chr20:6215197|6215351 hsa-miR-3197 1 0 0
chr20:6215197|6215351 hsa-miR-4257 0 1 0
chr20:6215197|6215351 hsa-miR-1268b 1 0 0
chr20:6215197|6215351 hsa-miR-4440 0 1 0
chr20:6215197|6215351 hsa-miR-4451 1 1 0
chr20:6215197|6215351 hsa-miR-4466 1 0 0
chr20:6215197|6215351 hsa-miR-4533 1 0 0
chr20:6215197|6215351 hsa-miR-4651 1 0 0
chr20:6215197|6215351 hsa-miR-4706 1 0 0
chr20:6215197|6215351 hsa-miR-4739 1 1 0
chr20:6215197|6215351 hsa-miR-4751 0 1 0
chr20:6215197|6215351 hsa-miR-6090 1 0 0
chr20:6215197|6215351 hsa-miR-6133 1 0 0
chr20:6215197|6215351 hsa-miR-6165 1 0 0
chr20:6215197|6215351 hsa-miR-12115 1 0 0
chr20:6215197|6215351 hsa-miR-6734-5p 1 0 0
chr20:6215197|6215351 hsa-miR-1287-5p 1 0 0
chr20:6215197|6215351 hsa-miR-7106-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6825-5p 1 1 0
chr20:6215197|6215351 hsa-miR-6894-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6799-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6089 1 1 0
chr20:6215197|6215351 hsa-miR-7847-3p 1 0 0
chr20:6215197|6215351 hsa-miR-4695-5p 1 1 0
chr20:6215197|6215351 hsa-miR-4722-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6762-3p 0 1 0
chr20:6215197|6215351 hsa-miR-197-5p 1 0 0
chr20:6215197|6215351 hsa-miR-3189-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6796-5p 1 0 0
chr20:6215197|6215351 hsa-miR-185-3p 1 1 0
chr20:6215197|6215351 hsa-miR-6782-5p 0 1 0
chr20:6215197|6215351 hsa-miR-4640-5p 1 0 0
chr20:6215197|6215351 hsa-miR-3614-5p 1 0 0
chr20:6215197|6215351 hsa-miR-4732-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6749-5p 1 0 0
chr20:6215197|6215351 hsa-miR-4743-5p 1 0 0
chr20:6215197|6215351 hsa-miR-3648 0 1 0
chr20:6215197|6215351 hsa-miR-6824-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6789-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6781-5p 1 0 0
chr20:6215197|6215351 hsa-miR-5584-5p 0 1 0
chr20:6215197|6215351 hsa-miR-7112-5p 0 1 0
chr20:6215197|6215351 hsa-miR-6792-5p 1 0 0
chr20:6215197|6215351 hsa-miR-431-3p 0 1 0
chr20:6215197|6215351 hsa-miR-1343-5p 1 0 0
chr20:6215197|6215351 hsa-miR-5001-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6752-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6754-5p 0 1 0
chr20:6215197|6215351 hsa-miR-6803-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6842-5p 0 1 0
chr20:6215197|6215351 hsa-miR-6851-5p 1 0 0
chr20:6215197|6215351 hsa-miR-7107-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6722-3p 1 0 0
chr20:6215197|6215351 hsa-miR-4728-5p 1 0 0
chr20:6215197|6215351 hsa-miR-4745-5p 1 0 0
chr20:6215197|6215351 hsa-miR-675-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6794-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6858-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6831-5p 1 0 0
chr20:6215197|6215351 hsa-miR-939-5p 1 0 0
chr20:6215197|6215351 hsa-miR-6758-5p 0 1 0
chr20:6215197|6215351 hsa-miR-6856-5p 1 1 0
chr20:6215197|6215351 hsa-miR-4664-5p 0 1 0
chr20:6215197|6215351 hsa-miR-4665-5p 1 0 0
chr20:6215197|6215351 hsa-miR-3679-5p 1 0 0
chr20:6215197|6215351 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr20:6215197|6215351
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MLIQVLLSVNNRLYHGEEQPHDLWMEQHPLL
Nucleotide Sequence TTGCTGATCCAGGTCCTCCTCTCTGTGAATAACCGGCTCTACCACGGGGAAGAGCAGCCCCACGACCTCTGGATGGAGCAGCACCCCTTGCTC
CircID chr20:6215197|6215351
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MLHPEVVGLLFPVVEPVIHREEDLDQQEAFEVREEVPNNKEAAGREK
Nucleotide Sequence CTGCTCCATCCAGAGGTCGTGGGGCTGCTCTTCCCCGTGGTAGAGCCGGTTATTCACAGAGAGGAGGACCTGGATCAGCAAGAGGCGTTCGAGGTGCGAGAGGAGGTGCCCAACAACAAAGAGGCCGCGGGCAGGGAAAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab