CircNet

General Information

circRNA Basic Information

CircID	chr20:63543338\|63543489
Strand	+
CircType	exon
Host Gene	ENSG00000125508.3;
Algorism	CIRI2;
Sequence	CCTTCCTAGTCCGGGCCCAGGCCAAGGTCTGCCACTACCGGGTCTCCATGGCAGCTGATGGCAGCCTCTACCTGCAGAAGGGACGGCTCTTTCCCGGCCTGGAGGAGCTGCTCACCTACTACAAGGCCAACTGGAAGCTGATCCAGAACCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:63543338\|63543489	hsa-miR-22-5p	0	0	1
chr20:63543338\|63543489	hsa-miR-22-3p	0	0	1
chr20:63543338\|63543489	hsa-miR-646	0	1	1
chr20:63543338\|63543489	hsa-miR-661	0	1	1
chr20:63543338\|63543489	hsa-miR-657	0	0	1
chr20:63543338\|63543489	hsa-miR-1237-5p	0	0	1
chr20:63543338\|63543489	hsa-miR-1237-3p	0	0	1
chr20:63543338\|63543489	hsa-miR-1205	0	0	1
chr20:63543338\|63543489	hsa-miR-1299	0	0	1
chr20:63543338\|63543489	hsa-miR-1276	0	0	1
chr20:63543338\|63543489	hsa-miR-145-5p	0	0	1
chr20:63543338\|63543489	hsa-miR-296-5p	0	0	1
chr20:63543338\|63543489	hsa-miR-485-5p	0	0	1
chr20:63543338\|63543489	hsa-miR-1184	0	0	1
chr20:63543338\|63543489	hsa-miR-1207-3p	0	0	1
chr20:63543338\|63543489	hsa-miR-516b	0	0	1
chr20:63543338\|63543489	hsa-miR-544	0	0	1
chr20:63543338\|63543489	hsa-miR-762	1	0	0
chr20:63543338\|63543489	hsa-miR-1538	0	1	0
chr20:63543338\|63543489	hsa-miR-3176	1	0	0
chr20:63543338\|63543489	hsa-miR-3661	1	0	0
chr20:63543338\|63543489	hsa-miR-4505	1	0	0
chr20:63543338\|63543489	hsa-miR-4507	1	0	0
chr20:63543338\|63543489	hsa-miR-1587	1	0	0
chr20:63543338\|63543489	hsa-miR-4734	1	0	0
chr20:63543338\|63543489	hsa-miR-5787	1	0	0
chr20:63543338\|63543489	hsa-miR-6071	1	0	0
chr20:63543338\|63543489	hsa-miR-222-5p	1	0	0
chr20:63543338\|63543489	hsa-miR-152-5p	0	1	0
chr20:63543338\|63543489	hsa-miR-671-5p	1	0	0
chr20:63543338\|63543489	hsa-miR-6089	1	0	0
chr20:63543338\|63543489	hsa-miR-939-3p	0	1	0
chr20:63543338\|63543489	hsa-miR-6501-5p	1	0	0
chr20:63543338\|63543489	hsa-miR-6736-3p	0	1	0
chr20:63543338\|63543489	hsa-miR-4715-5p	0	1	0
chr20:63543338\|63543489	hsa-miR-6866-5p	0	1	0
chr20:63543338\|63543489	hsa-miR-6813-3p	0	1	0
chr20:63543338\|63543489	hsa-miR-20b-3p	0	1	0
chr20:63543338\|63543489	hsa-miR-7107-5p	1	0	0
chr20:63543338\|63543489	hsa-miR-3127-3p	0	1	0
chr20:63543338\|63543489	hsa-miR-3620-5p	1	0	0
chr20:63543338\|63543489	hsa-miR-6739-5p	0	1	0
chr20:63543338\|63543489	hsa-miR-6773-5p	0	1	0
chr20:63543338\|63543489	hsa-miR-6724-5p	0	1	0
chr20:63543338\|63543489	hsa-miR-4691-5p	1	1	0
chr20:63543338\|63543489	hsa-miR-6817-5p	1	1	0
chr20:63543338\|63543489	hsa-miR-6827-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:63543338\|63543489
ORF Type	ORF1
Protein Length	28
Nucleotide Length	87
Protein Sequence	MMAASTCRRDGSFPAWRSCSPTTRPTGS
Nucleotide Sequence	CTGATGGCAGCCTCTACCTGCAGAAGGGACGGCTCTTTCCCGGCCTGGAGGAGCTGCTCACCTACTACAAGGCCAACTGGAAGCTGA

CircID	chr20:63543338\|63543489
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MAADGSLYLQKGRLFPGLEELLTYYKANWKLIQNP
Nucleotide Sequence	ATGGCAGCTGATGGCAGCCTCTACCTGCAGAAGGGACGGCTCTTTCCCGGCCTGGAGGAGCTGCTCACCTACTACAAGGCCAACTGGAAGCTGATCCAGAACCCC

CircID	chr20:63543338\|63543489
ORF Type	ORF3
Protein Length	46
Nucleotide Length	141
Protein Sequence	MDQLPVGLVVGEQLLQAGKEPSLLQVEAAISCHGDPVVADLGLGPD
Nucleotide Sequence	CTGGATCAGCTTCCAGTTGGCCTTGTAGTAGGTGAGCAGCTCCTCCAGGCCGGGAAAGAGCCGTCCCTTCTGCAGGTAGAGGCTGCCATCAGCTGCCATGGAGACCCGGTAGTGGCAGACCTTGGCCTGGGCCCGGACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information