CircRNA Information

General Information
circRNA Basic Information
CircID chr20:63706357|63706693
Strand -
CircType exon
Host Gene ENSG00000101246.18;
Algorism CIRI2;
Sequence CTTGTCCCACAAAGACTGCAGCTCTTCCTGCCCTCCTAAGTCCCAGAACATGAGCCGAGCCTTTCCCACATCCACAGTGCCGACTGGGGAGAGGAGGAAACAGGCAAGGCTCATGACCTTGGTCCTCGACACACCCAGTCCCAGCTCTCCCAGGGGATGGGGCAAACCATGCTGGTGCCACTCAAATGAGACTTGAGAGGGGCCCGACAGGGCTGTGGCCACGGGCCAGCTGGACTGTGAATATCACGGCATCCTCAAGGCCCCAAACCCACAGCCTGCTATTGAGACCCTTACTGTTTAGGCCCACGGTGGTGGTGATTTTGGATAGACTCATCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:63706357|63706693 hsa-miR-27a-5p 0 0 1
chr20:63706357|63706693 hsa-miR-27a-3p 0 0 1
chr20:63706357|63706693 hsa-miR-197-5p 0 0 1
chr20:63706357|63706693 hsa-miR-197-3p 0 0 1
chr20:63706357|63706693 hsa-miR-27b-5p 0 0 1
chr20:63706357|63706693 hsa-miR-27b-3p 0 0 1
chr20:63706357|63706693 hsa-miR-558 0 0 1
chr20:63706357|63706693 hsa-miR-579-5p 0 0 1
chr20:63706357|63706693 hsa-miR-579-3p 0 0 1
chr20:63706357|63706693 hsa-miR-588 0 0 1
chr20:63706357|63706693 hsa-miR-609 0 0 1
chr20:63706357|63706693 hsa-miR-611 0 1 1
chr20:63706357|63706693 hsa-miR-627-5p 0 0 1
chr20:63706357|63706693 hsa-miR-627-3p 0 0 1
chr20:63706357|63706693 hsa-miR-629-5p 0 0 1
chr20:63706357|63706693 hsa-miR-629-3p 0 0 1
chr20:63706357|63706693 hsa-miR-634 1 0 1
chr20:63706357|63706693 hsa-miR-924 0 0 1
chr20:63706357|63706693 hsa-miR-1182 0 1 1
chr20:63706357|63706693 hsa-miR-1226-5p 0 0 1
chr20:63706357|63706693 hsa-miR-1226-3p 0 0 1
chr20:63706357|63706693 hsa-miR-1238-5p 0 0 1
chr20:63706357|63706693 hsa-miR-1238-3p 0 0 1
chr20:63706357|63706693 hsa-miR-1204 0 0 1
chr20:63706357|63706693 hsa-miR-1255a 0 0 1
chr20:63706357|63706693 hsa-miR-513c-5p 0 0 1
chr20:63706357|63706693 hsa-miR-513c-3p 0 0 1
chr20:63706357|63706693 hsa-miR-296-5p 0 1 1
chr20:63706357|63706693 hsa-miR-1224-5p 0 0 1
chr20:63706357|63706693 hsa-miR-299-3p 0 0 1
chr20:63706357|63706693 hsa-miR-146b-3p 0 0 1
chr20:63706357|63706693 hsa-miR-339-5p 0 0 1
chr20:63706357|63706693 hsa-miR-1207-3p 0 1 1
chr20:63706357|63706693 hsa-miR-331-3p 0 0 1
chr20:63706357|63706693 hsa-miR-513a-5p 0 0 1
chr20:63706357|63706693 hsa-miR-338-3p 0 0 1
chr20:63706357|63706693 hsa-miR-1302 0 0 1
chr20:63706357|63706693 hsa-miR-455-3p 0 0 1
chr20:63706357|63706693 hsa-miR-151-5p 0 0 1
chr20:63706357|63706693 hsa-miR-220b 0 0 1
chr20:63706357|63706693 hsa-miR-128 0 0 1
chr20:63706357|63706693 hsa-miR-1255b 0 0 1
chr20:63706357|63706693 hsa-miR-1185 0 0 1
chr20:63706357|63706693 hsa-miR-1264 0 1 0
chr20:63706357|63706693 hsa-miR-762 1 0 0
chr20:63706357|63706693 hsa-miR-1183 1 0 0
chr20:63706357|63706693 hsa-miR-2861 1 0 0
chr20:63706357|63706693 hsa-miR-3122 1 0 0
chr20:63706357|63706693 hsa-miR-3131 0 1 0
chr20:63706357|63706693 hsa-miR-3181 1 0 0
chr20:63706357|63706693 hsa-miR-3183 0 1 0
chr20:63706357|63706693 hsa-miR-4298 1 0 0
chr20:63706357|63706693 hsa-miR-4314 0 1 0
chr20:63706357|63706693 hsa-miR-4322 1 0 0
chr20:63706357|63706693 hsa-miR-3945 1 0 0
chr20:63706357|63706693 hsa-miR-4451 1 0 0
chr20:63706357|63706693 hsa-miR-3689e 0 1 0
chr20:63706357|63706693 hsa-miR-3689f 0 1 0
chr20:63706357|63706693 hsa-miR-1587 1 0 0
chr20:63706357|63706693 hsa-miR-4642 1 0 0
chr20:63706357|63706693 hsa-miR-4651 1 0 0
chr20:63706357|63706693 hsa-miR-4656 1 0 0
chr20:63706357|63706693 hsa-miR-4734 1 0 0
chr20:63706357|63706693 hsa-miR-4779 0 1 0
chr20:63706357|63706693 hsa-miR-5193 0 1 0
chr20:63706357|63706693 hsa-miR-5787 1 0 0
chr20:63706357|63706693 hsa-miR-6074 0 1 0
chr20:63706357|63706693 hsa-miR-6077 1 1 0
chr20:63706357|63706693 hsa-miR-6085 1 0 0
chr20:63706357|63706693 hsa-miR-8052 1 1 0
chr20:63706357|63706693 hsa-miR-8063 0 1 0
chr20:63706357|63706693 hsa-miR-8065 0 1 0
chr20:63706357|63706693 hsa-miR-8085 1 1 0
chr20:63706357|63706693 hsa-miR-12118 1 0 0
chr20:63706357|63706693 hsa-miR-154-5p 0 1 0
chr20:63706357|63706693 hsa-miR-504-3p 1 0 0
chr20:63706357|63706693 hsa-miR-7851-3p 0 1 0
chr20:63706357|63706693 hsa-miR-7114-5p 0 1 0
chr20:63706357|63706693 hsa-miR-6089 1 0 0
chr20:63706357|63706693 hsa-miR-3192-5p 1 1 0
chr20:63706357|63706693 hsa-miR-4695-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6867-5p 1 0 0
chr20:63706357|63706693 hsa-miR-4722-5p 1 0 0
chr20:63706357|63706693 hsa-miR-3677-5p 0 1 0
chr20:63706357|63706693 hsa-miR-593-5p 1 1 0
chr20:63706357|63706693 hsa-miR-6759-5p 0 1 0
chr20:63706357|63706693 hsa-miR-3189-5p 1 1 0
chr20:63706357|63706693 hsa-miR-6776-5p 0 1 0
chr20:63706357|63706693 hsa-miR-1915-5p 0 1 0
chr20:63706357|63706693 hsa-miR-6716-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6793-5p 0 1 0
chr20:63706357|63706693 hsa-miR-6735-3p 0 1 0
chr20:63706357|63706693 hsa-miR-345-3p 1 0 0
chr20:63706357|63706693 hsa-miR-1229-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6784-5p 1 0 0
chr20:63706357|63706693 hsa-miR-4640-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6514-3p 0 1 0
chr20:63706357|63706693 hsa-miR-3691-5p 1 1 0
chr20:63706357|63706693 hsa-miR-4764-5p 0 1 0
chr20:63706357|63706693 hsa-miR-1228-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6771-5p 1 0 0
chr20:63706357|63706693 hsa-miR-7111-3p 0 1 0
chr20:63706357|63706693 hsa-miR-149-3p 1 1 0
chr20:63706357|63706693 hsa-miR-6769a-3p 0 1 0
chr20:63706357|63706693 hsa-miR-891a-3p 0 1 0
chr20:63706357|63706693 hsa-miR-6856-3p 0 1 0
chr20:63706357|63706693 hsa-miR-584-5p 1 0 0
chr20:63706357|63706693 hsa-miR-3173-5p 0 1 0
chr20:63706357|63706693 hsa-miR-6779-3p 0 1 0
chr20:63706357|63706693 hsa-miR-6847-3p 0 1 0
chr20:63706357|63706693 hsa-miR-1207-5p 1 0 0
chr20:63706357|63706693 hsa-miR-1273h-5p 1 0 0
chr20:63706357|63706693 hsa-miR-4763-3p 1 0 0
chr20:63706357|63706693 hsa-miR-6778-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6870-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6743-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6752-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6754-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6769a-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6803-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6813-5p 1 0 0
chr20:63706357|63706693 hsa-miR-1249-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6779-5p 1 1 0
chr20:63706357|63706693 hsa-miR-6780a-5p 1 1 0
chr20:63706357|63706693 hsa-miR-6797-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6879-5p 1 1 0
chr20:63706357|63706693 hsa-miR-7111-5p 1 0 0
chr20:63706357|63706693 hsa-miR-320a-5p 0 1 0
chr20:63706357|63706693 hsa-miR-3620-5p 1 0 0
chr20:63706357|63706693 hsa-miR-4728-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6780b-5p 1 1 0
chr20:63706357|63706693 hsa-miR-328-5p 1 1 0
chr20:63706357|63706693 hsa-miR-4632-5p 1 1 0
chr20:63706357|63706693 hsa-miR-4745-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6735-5p 0 1 0
chr20:63706357|63706693 hsa-miR-6846-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6848-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6858-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6883-5p 1 0 0
chr20:63706357|63706693 hsa-miR-4436b-3p 1 1 0
chr20:63706357|63706693 hsa-miR-939-5p 1 1 0
chr20:63706357|63706693 hsa-miR-4758-5p 1 1 0
chr20:63706357|63706693 hsa-miR-365a-5p 1 1 0
chr20:63706357|63706693 hsa-miR-365b-5p 1 1 0
chr20:63706357|63706693 hsa-miR-30c-1-3p 0 1 0
chr20:63706357|63706693 hsa-miR-6731-5p 1 1 0
chr20:63706357|63706693 hsa-miR-7843-5p 0 1 0
chr20:63706357|63706693 hsa-miR-4646-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6785-5p 1 1 0
chr20:63706357|63706693 hsa-miR-6724-5p 1 0 0
chr20:63706357|63706693 hsa-miR-6791-5p 0 1 0
chr20:63706357|63706693 hsa-miR-6762-5p 1 0 0
chr20:63706357|63706693 hsa-miR-9851-3p 1 1 0
chr20:63706357|63706693 hsa-miR-619-5p 1 0 0
chr20:63706357|63706693 hsa-miR-151a-5p 1 0 0
chr20:63706357|63706693 hsa-miR-3689a-5p 0 1 0
chr20:63706357|63706693 hsa-miR-3689b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:63706357|63706693
ORF Type ORF1
Protein Length 64
Nucleotide Length 195
Protein Sequence LSHKDCSSSCPPKSQNMSRAFPTSTVPTGERRKQARLMTLVLDTPSPSSPRGWGKPCWCHSNET
Nucleotide Sequence TTGTCCCACAAAGACTGCAGCTCTTCCTGCCCTCCTAAGTCCCAGAACATGAGCCGAGCCTTTCCCACATCCACAGTGCCGACTGGGGAGAGGAGGAAACAGGCAAGGCTCATGACCTTGGTCCTCGACACACCCAGTCCCAGCTCTCCCAGGGGATGGGGCAAACCATGCTGGTGCCACTCAAATGAGACTTGA
CircID chr20:63706357|63706693
ORF Type ORF2
Protein Length 50
Nucleotide Length 150
Protein Sequence MRLERGPTGLWPRASWTVNITASSRPQTHSLLLRPLLFRPTVVVILDRLI
Nucleotide Sequence ATGAGACTTGAGAGGGGCCCGACAGGGCTGTGGCCACGGGCCAGCTGGACTGTGAATATCACGGCATCCTCAAGGCCCCAAACCCACAGCCTGCTATTGAGACCCTTACTGTTTAGGCCCACGGTGGTGGTGATTTTGGATAGACTCATC
CircID chr20:63706357|63706693
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MSLSKITTTVGLNSKGLNSRLWVWGLEDAVIFTVQLARGHSPVGPLSSLI
Nucleotide Sequence ATGAGTCTATCCAAAATCACCACCACCGTGGGCCTAAACAGTAAGGGTCTCAATAGCAGGCTGTGGGTTTGGGGCCTTGAGGATGCCGTGATATTCACAGTCCAGCTGGCCCGTGGCCACAGCCCTGTCGGGCCCCTCTCAAGTCTCATTTGA
CircID chr20:63706357|63706693
ORF Type ORF4
Protein Length 34
Nucleotide Length 102
Protein Sequence MFPPLPSRHCGCGKGSAHVLGLRRAGRAAVFVGQ
Nucleotide Sequence CTGTTTCCTCCTCTCCCCAGTCGGCACTGTGGATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAGGAGGGCAGGAAGAGCTGCAGTCTTTGTGGGACAA
CircID chr20:63706357|63706693
ORF Type ORF5
Protein Length 70
Nucleotide Length 210
Protein Sequence MSGPSQVSFEWHQHGLPHPLGELGLGVSRTKVMSLACFLLSPVGTVDVGKARLMFWDLGGQEELQSLWDK
Nucleotide Sequence CTGTCGGGCCCCTCTCAAGTCTCATTTGAGTGGCACCAGCATGGTTTGCCCCATCCCCTGGGAGAGCTGGGACTGGGTGTGTCGAGGACCAAGGTCATGAGCCTTGCCTGTTTCCTCCTCTCCCCAGTCGGCACTGTGGATGTGGGAAAGGCTCGGCTCATGTTCTGGGACTTAGGAGGGCAGGAAGAGCTGCAGTCTTTGTGGGACAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab