CircRNA Information

General Information
circRNA Basic Information
CircID chr20:63738650|63738912
Strand -
CircType exon
Host Gene ENSG00000273154.2;
Algorism CIRI2;
Sequence CCACCACAGACCCGCTGGACCCCAAGGGCCAGGGAGCGATTCTGGCCCTGGCGGGTGACCTGGCCTACCAGACCCTCCCGCTCAGGGCCCTGGATGTGGACAGCGGCCCCCTGGAAAACGTGTATGAGAGCATCCGGGAGCTGGGGGACCCTGCTGGCAGGAGCAGCACGTGCGGGGCTGGGACGCCCCCTGCTTCCAGCTGCCCCAGCCTAGGGAGGGGCTGGAGACCCCTCCCTGCCTCCCTGCCCTGAACACTCAAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:63738650|63738912 hsa-miR-214-5p 0 0 1
chr20:63738650|63738912 hsa-miR-214-3p 0 0 1
chr20:63738650|63738912 hsa-miR-328-5p 0 0 1
chr20:63738650|63738912 hsa-miR-328-3p 0 0 1
chr20:63738650|63738912 hsa-miR-645 0 1 1
chr20:63738650|63738912 hsa-miR-650 0 1 1
chr20:63738650|63738912 hsa-miR-766-5p 0 0 1
chr20:63738650|63738912 hsa-miR-766-3p 0 0 1
chr20:63738650|63738912 hsa-miR-940 1 1 1
chr20:63738650|63738912 hsa-miR-1182 0 1 1
chr20:63738650|63738912 hsa-miR-1202 0 0 1
chr20:63738650|63738912 hsa-miR-1291 0 1 1
chr20:63738650|63738912 hsa-miR-1321 0 1 1
chr20:63738650|63738912 hsa-miR-1827 0 0 1
chr20:63738650|63738912 hsa-miR-671-5p 0 0 1
chr20:63738650|63738912 hsa-miR-486-3p 0 1 1
chr20:63738650|63738912 hsa-miR-615-5p 1 1 1
chr20:63738650|63738912 hsa-miR-574-5p 0 0 1
chr20:63738650|63738912 hsa-miR-361-3p 0 1 1
chr20:63738650|63738912 hsa-miR-1207-3p 0 0 1
chr20:63738650|63738912 hsa-miR-1207-5p 1 1 1
chr20:63738650|63738912 hsa-miR-125a-5p 0 0 1
chr20:63738650|63738912 hsa-miR-485-3p 0 1 1
chr20:63738650|63738912 hsa-miR-125b 0 0 1
chr20:63738650|63738912 hsa-miR-637 1 0 0
chr20:63738650|63738912 hsa-miR-762 1 0 0
chr20:63738650|63738912 hsa-miR-761 0 1 0
chr20:63738650|63738912 hsa-miR-4270 0 1 0
chr20:63738650|63738912 hsa-miR-3918 0 1 0
chr20:63738650|63738912 hsa-miR-4441 0 1 0
chr20:63738650|63738912 hsa-miR-4448 1 1 0
chr20:63738650|63738912 hsa-miR-3960 1 0 0
chr20:63738650|63738912 hsa-miR-3972 0 1 0
chr20:63738650|63738912 hsa-miR-4658 0 1 0
chr20:63738650|63738912 hsa-miR-4706 0 1 0
chr20:63738650|63738912 hsa-miR-4739 1 1 0
chr20:63738650|63738912 hsa-miR-5090 1 1 0
chr20:63738650|63738912 hsa-miR-5572 1 1 0
chr20:63738650|63738912 hsa-miR-5704 0 1 0
chr20:63738650|63738912 hsa-miR-5787 1 1 0
chr20:63738650|63738912 hsa-miR-7977 0 1 0
chr20:63738650|63738912 hsa-miR-8072 1 0 0
chr20:63738650|63738912 hsa-miR-8073 0 1 0
chr20:63738650|63738912 hsa-miR-8089 1 0 0
chr20:63738650|63738912 hsa-miR-6879-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6861-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6720-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6510-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6089 1 0 0
chr20:63738650|63738912 hsa-miR-4695-5p 1 0 0
chr20:63738650|63738912 hsa-miR-4722-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6727-5p 1 1 0
chr20:63738650|63738912 hsa-miR-6721-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6805-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6798-5p 0 1 0
chr20:63738650|63738912 hsa-miR-345-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6772-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6784-5p 1 1 0
chr20:63738650|63738912 hsa-miR-4640-5p 0 1 0
chr20:63738650|63738912 hsa-miR-3127-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6771-5p 1 0 0
chr20:63738650|63738912 hsa-miR-149-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6736-3p 0 1 0
chr20:63738650|63738912 hsa-miR-3162-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6769a-3p 0 1 0
chr20:63738650|63738912 hsa-miR-3189-3p 0 1 0
chr20:63738650|63738912 hsa-miR-7160-3p 0 1 0
chr20:63738650|63738912 hsa-miR-7106-3p 0 1 0
chr20:63738650|63738912 hsa-miR-2277-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6767-3p 1 1 0
chr20:63738650|63738912 hsa-miR-4433a-5p 1 0 0
chr20:63738650|63738912 hsa-miR-3173-5p 0 1 0
chr20:63738650|63738912 hsa-miR-4433b-5p 1 0 0
chr20:63738650|63738912 hsa-miR-1233-5p 1 0 0
chr20:63738650|63738912 hsa-miR-4763-3p 1 1 0
chr20:63738650|63738912 hsa-miR-6778-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6787-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6816-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6893-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6775-5p 1 1 0
chr20:63738650|63738912 hsa-miR-6743-5p 1 1 0
chr20:63738650|63738912 hsa-miR-6752-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6754-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6756-5p 1 1 0
chr20:63738650|63738912 hsa-miR-6722-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6779-5p 1 0 0
chr20:63738650|63738912 hsa-miR-6808-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6879-5p 1 1 0
chr20:63738650|63738912 hsa-miR-3620-5p 0 1 0
chr20:63738650|63738912 hsa-miR-4728-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6836-5p 1 0 0
chr20:63738650|63738912 hsa-miR-1909-3p 0 1 0
chr20:63738650|63738912 hsa-miR-4632-5p 0 1 0
chr20:63738650|63738912 hsa-miR-4685-5p 1 1 0
chr20:63738650|63738912 hsa-miR-4726-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6735-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6777-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6883-5p 1 1 0
chr20:63738650|63738912 hsa-miR-4436b-3p 0 1 0
chr20:63738650|63738912 hsa-miR-4697-5p 1 1 0
chr20:63738650|63738912 hsa-miR-939-5p 1 0 0
chr20:63738650|63738912 hsa-miR-4758-5p 1 1 0
chr20:63738650|63738912 hsa-miR-6799-3p 1 0 0
chr20:63738650|63738912 hsa-miR-1914-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6785-5p 0 1 0
chr20:63738650|63738912 hsa-miR-6790-5p 0 1 0
chr20:63738650|63738912 hsa-miR-4722-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6837-5p 0 1 0
chr20:63738650|63738912 hsa-miR-10392-3p 0 1 0
chr20:63738650|63738912 hsa-miR-6512-3p 0 1 0
chr20:63738650|63738912 hsa-miR-4756-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr20:63738650|63738912
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MWTAAPWKTCMRASGSWGTLLAGAARAGLGRPLLPAAPA
Nucleotide Sequence ATGTGGACAGCGGCCCCCTGGAAAACGTGTATGAGAGCATCCGGGAGCTGGGGGACCCTGCTGGCAGGAGCAGCACGTGCGGGGCTGGGACGCCCCCTGCTTCCAGCTGCCCCAGCCTAG
CircID chr20:63738650|63738912
ORF Type ORF2
Protein Length 78
Nucleotide Length 237
Protein Sequence MDPKGQGAILALAGDLAYQTLPLRALDVDSGPLENVYESIRELGDPAGRSSTCGAGTPPASSCPSLGRGWRPLPASLP
Nucleotide Sequence CTGGACCCCAAGGGCCAGGGAGCGATTCTGGCCCTGGCGGGTGACCTGGCCTACCAGACCCTCCCGCTCAGGGCCCTGGATGTGGACAGCGGCCCCCTGGAAAACGTGTATGAGAGCATCCGGGAGCTGGGGGACCCTGCTGGCAGGAGCAGCACGTGCGGGGCTGGGACGCCCCCTGCTTCCAGCTGCCCCAGCCTAGGGAGGGGCTGGAGACCCCTCCCTGCCTCCCTGCCCTGA
CircID chr20:63738650|63738912
ORF Type ORF3
Protein Length 64
Nucleotide Length 195
Protein Sequence MSVQGREAGRGLQPLPRLGQLEAGGVPAPHVLLLPAGSPSSRMLSYTFSRGPLSTSRALSGRVW
Nucleotide Sequence TTGAGTGTTCAGGGCAGGGAGGCAGGGAGGGGTCTCCAGCCCCTCCCTAGGCTGGGGCAGCTGGAAGCAGGGGGCGTCCCAGCCCCGCACGTGCTGCTCCTGCCAGCAGGGTCCCCCAGCTCCCGGATGCTCTCATACACGTTTTCCAGGGGGCCGCTGTCCACATCCAGGGCCCTGAGCGGGAGGGTCTGGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab