CircRNA Information

General Information
circRNA Basic Information
CircID chr20:63890787|63890983
Strand -
CircType exon
Host Gene ENSG00000101150.16;
Algorism CIRI2;
Sequence CTGCTTCTCTTCTCAACCGTGGCAGCTCCCGCTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGGCCAAGAGAAGGAAAACCCTGTCTTTAGCACCCTTTAAAAGAACTGTGCCCCCCTTCTCAGTGCTGCCTTTGCATGGGCCTGGCCCGGCTCACATTCGTCAGTGACTCCAACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:63890787|63890983 hsa-miR-22-5p 0 0 1
chr20:63890787|63890983 hsa-miR-22-3p 0 0 1
chr20:63890787|63890983 hsa-miR-328-5p 0 0 1
chr20:63890787|63890983 hsa-miR-328-3p 0 0 1
chr20:63890787|63890983 hsa-miR-335-5p 0 0 1
chr20:63890787|63890983 hsa-miR-335-3p 0 0 1
chr20:63890787|63890983 hsa-miR-527 0 0 1
chr20:63890787|63890983 hsa-miR-558 0 0 1
chr20:63890787|63890983 hsa-miR-580-5p 0 0 1
chr20:63890787|63890983 hsa-miR-580-3p 0 0 1
chr20:63890787|63890983 hsa-miR-1296-5p 0 0 1
chr20:63890787|63890983 hsa-miR-1296-3p 0 0 1
chr20:63890787|63890983 hsa-miR-708-5p 0 0 1
chr20:63890787|63890983 hsa-miR-708-3p 0 0 1
chr20:63890787|63890983 hsa-miR-920 1 0 1
chr20:63890787|63890983 hsa-miR-942-5p 0 0 1
chr20:63890787|63890983 hsa-miR-942-3p 0 0 1
chr20:63890787|63890983 hsa-miR-1237-5p 0 0 1
chr20:63890787|63890983 hsa-miR-1237-3p 0 0 1
chr20:63890787|63890983 hsa-miR-1248 0 0 1
chr20:63890787|63890983 hsa-miR-1253 0 0 1
chr20:63890787|63890983 hsa-miR-1289 0 0 1
chr20:63890787|63890983 hsa-miR-28-5p 0 0 1
chr20:63890787|63890983 hsa-miR-1207-5p 0 1 1
chr20:63890787|63890983 hsa-miR-518a-5p 0 0 1
chr20:63890787|63890983 hsa-miR-1233 0 0 1
chr20:63890787|63890983 hsa-miR-1300 0 0 1
chr20:63890787|63890983 hsa-miR-129-3p 0 0 1
chr20:63890787|63890983 hsa-miR-663a 1 0 0
chr20:63890787|63890983 hsa-miR-1973 1 1 0
chr20:63890787|63890983 hsa-miR-3154 1 0 0
chr20:63890787|63890983 hsa-miR-3714 0 1 0
chr20:63890787|63890983 hsa-miR-3945 1 1 0
chr20:63890787|63890983 hsa-miR-4420 0 1 0
chr20:63890787|63890983 hsa-miR-4513 1 0 0
chr20:63890787|63890983 hsa-miR-6132 0 1 0
chr20:63890787|63890983 hsa-miR-7155-5p 1 0 0
chr20:63890787|63890983 hsa-miR-668-3p 1 0 0
chr20:63890787|63890983 hsa-miR-6765-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6861-5p 1 0 0
chr20:63890787|63890983 hsa-miR-139-3p 1 0 0
chr20:63890787|63890983 hsa-miR-4755-3p 0 1 0
chr20:63890787|63890983 hsa-miR-6727-5p 1 0 0
chr20:63890787|63890983 hsa-miR-197-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6716-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6868-3p 0 1 0
chr20:63890787|63890983 hsa-miR-2467-5p 0 1 0
chr20:63890787|63890983 hsa-miR-2467-3p 1 0 0
chr20:63890787|63890983 hsa-miR-6782-5p 1 0 0
chr20:63890787|63890983 hsa-miR-4713-5p 0 1 0
chr20:63890787|63890983 hsa-miR-1229-5p 1 0 0
chr20:63890787|63890983 hsa-miR-4640-5p 0 1 0
chr20:63890787|63890983 hsa-miR-885-3p 1 0 0
chr20:63890787|63890983 hsa-miR-92b-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6809-3p 0 1 0
chr20:63890787|63890983 hsa-miR-616-3p 0 1 0
chr20:63890787|63890983 hsa-miR-6887-3p 0 1 0
chr20:63890787|63890983 hsa-miR-758-5p 0 1 0
chr20:63890787|63890983 hsa-miR-4749-3p 0 1 0
chr20:63890787|63890983 hsa-miR-2116-3p 0 1 0
chr20:63890787|63890983 hsa-miR-4763-3p 1 1 0
chr20:63890787|63890983 hsa-miR-6816-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6775-5p 1 1 0
chr20:63890787|63890983 hsa-miR-6879-5p 1 1 0
chr20:63890787|63890983 hsa-miR-320a-5p 0 1 0
chr20:63890787|63890983 hsa-miR-5196-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6836-5p 0 1 0
chr20:63890787|63890983 hsa-miR-10396b-5p 1 1 0
chr20:63890787|63890983 hsa-miR-4632-5p 0 1 0
chr20:63890787|63890983 hsa-miR-4726-5p 0 1 0
chr20:63890787|63890983 hsa-miR-6735-5p 1 1 0
chr20:63890787|63890983 hsa-miR-6795-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6846-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6858-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6887-5p 1 0 0
chr20:63890787|63890983 hsa-miR-4436b-3p 0 1 0
chr20:63890787|63890983 hsa-miR-4697-5p 1 0 0
chr20:63890787|63890983 hsa-miR-6885-5p 1 1 0
chr20:63890787|63890983 hsa-miR-3198 1 1 0
chr20:63890787|63890983 hsa-miR-6891-5p 1 0 0
chr20:63890787|63890983 hsa-miR-5591-5p 0 1 0
chr20:63890787|63890983 hsa-miR-4659a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr20:63890787|63890983
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MGMGGAKRRKTLSLAPFKRTVPPFSVLPLHGPGPAHIRQ
Nucleotide Sequence CTGGGAATGGGAGGGGCCAAGAGAAGGAAAACCCTGTCTTTAGCACCCTTTAAAAGAACTGTGCCCCCCTTCTCAGTGCTGCCTTTGCATGGGCCTGGCCCGGCTCACATTCGTCAGTGA
CircID chr20:63890787|63890983
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MAPMPCPKGLLSLWEWEGPREGKPCL
Nucleotide Sequence CTGGCTCCTATGCCCTGCCCTAAAGGGCTCTTGAGCCTCTGGGAATGGGAGGGGCCAAGAGAAGGAAAACCCTGTCTTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab