CircRNA Information

General Information
circRNA Basic Information
CircID chr20:63933104|63933273
Strand +
CircType exon
Host Gene ENSG00000101152.9;
Algorism CIRI2;
Sequence CTACCCTTCTGCACAGCCTCGGGTGGCTGCTGAGGGCAATGAGTGAGCTGGGGCCACGGGTCAGCAGGCAGGCAGGGAAGGGGGCTTCAGGAGGCTCATCTGGTTGGTCCGAGCCAGAGCCATCACACACAGCCTCCTCCTCAGCTTTATCTCTACAGGGACCTCTGCAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:63933104|63933273 hsa-miR-214-5p 0 0 1
chr20:63933104|63933273 hsa-miR-214-3p 0 0 1
chr20:63933104|63933273 hsa-miR-149-5p 0 0 1
chr20:63933104|63933273 hsa-miR-149-3p 0 0 1
chr20:63933104|63933273 hsa-miR-320a-5p 0 0 1
chr20:63933104|63933273 hsa-miR-320a-3p 0 0 1
chr20:63933104|63933273 hsa-miR-370-5p 0 0 1
chr20:63933104|63933273 hsa-miR-370-3p 0 0 1
chr20:63933104|63933273 hsa-miR-577 0 0 1
chr20:63933104|63933273 hsa-miR-765 0 0 1
chr20:63933104|63933273 hsa-miR-298 0 0 1
chr20:63933104|63933273 hsa-miR-874-5p 0 0 1
chr20:63933104|63933273 hsa-miR-874-3p 0 0 1
chr20:63933104|63933273 hsa-miR-760 0 1 1
chr20:63933104|63933273 hsa-miR-922 0 0 1
chr20:63933104|63933273 hsa-miR-663b 1 0 1
chr20:63933104|63933273 hsa-miR-1204 0 1 1
chr20:63933104|63933273 hsa-miR-485-5p 0 1 1
chr20:63933104|63933273 hsa-miR-339-5p 1 0 1
chr20:63933104|63933273 hsa-miR-628-5p 0 0 1
chr20:63933104|63933273 hsa-miR-320b 0 1 1
chr20:63933104|63933273 hsa-miR-320c 0 1 1
chr20:63933104|63933273 hsa-miR-320d 0 1 1
chr20:63933104|63933273 hsa-miR-1274a 0 0 1
chr20:63933104|63933273 hsa-miR-1274b 0 0 1
chr20:63933104|63933273 hsa-miR-346 1 0 0
chr20:63933104|63933273 hsa-miR-544b 0 1 0
chr20:63933104|63933273 hsa-miR-4313 1 0 0
chr20:63933104|63933273 hsa-miR-4281 1 0 0
chr20:63933104|63933273 hsa-miR-3917 0 1 0
chr20:63933104|63933273 hsa-miR-4429 0 1 0
chr20:63933104|63933273 hsa-miR-4741 0 1 0
chr20:63933104|63933273 hsa-miR-6088 0 1 0
chr20:63933104|63933273 hsa-miR-7706 1 0 0
chr20:63933104|63933273 hsa-miR-7974 0 1 0
chr20:63933104|63933273 hsa-miR-9718 0 1 0
chr20:63933104|63933273 hsa-miR-134-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6749-3p 1 0 0
chr20:63933104|63933273 hsa-miR-132-5p 0 1 0
chr20:63933104|63933273 hsa-miR-6747-3p 0 1 0
chr20:63933104|63933273 hsa-miR-6825-5p 1 0 0
chr20:63933104|63933273 hsa-miR-125a-3p 0 1 0
chr20:63933104|63933273 hsa-miR-6510-5p 1 0 0
chr20:63933104|63933273 hsa-miR-1225-3p 1 0 0
chr20:63933104|63933273 hsa-miR-4695-5p 0 1 0
chr20:63933104|63933273 hsa-miR-593-5p 1 0 0
chr20:63933104|63933273 hsa-miR-7160-5p 1 1 0
chr20:63933104|63933273 hsa-miR-3189-5p 1 0 0
chr20:63933104|63933273 hsa-miR-1915-5p 1 1 0
chr20:63933104|63933273 hsa-miR-2467-3p 1 0 0
chr20:63933104|63933273 hsa-miR-4436b-5p 1 0 0
chr20:63933104|63933273 hsa-miR-6894-3p 0 1 0
chr20:63933104|63933273 hsa-miR-7113-3p 1 1 0
chr20:63933104|63933273 hsa-miR-3677-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6847-5p 1 0 0
chr20:63933104|63933273 hsa-miR-4446-5p 1 0 0
chr20:63933104|63933273 hsa-miR-7156-3p 0 1 0
chr20:63933104|63933273 hsa-miR-7843-3p 0 1 0
chr20:63933104|63933273 hsa-miR-6769a-3p 1 0 0
chr20:63933104|63933273 hsa-miR-181b-5p 1 0 0
chr20:63933104|63933273 hsa-miR-6825-3p 1 0 0
chr20:63933104|63933273 hsa-miR-7106-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6832-5p 0 1 0
chr20:63933104|63933273 hsa-miR-6752-3p 1 1 0
chr20:63933104|63933273 hsa-miR-1245b-3p 0 1 0
chr20:63933104|63933273 hsa-miR-6872-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6886-3p 0 1 0
chr20:63933104|63933273 hsa-miR-5088-3p 1 0 0
chr20:63933104|63933273 hsa-miR-328-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6734-3p 0 1 0
chr20:63933104|63933273 hsa-miR-4763-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6722-3p 1 0 0
chr20:63933104|63933273 hsa-miR-3127-3p 1 1 0
chr20:63933104|63933273 hsa-miR-4685-3p 1 1 0
chr20:63933104|63933273 hsa-miR-6858-5p 1 1 0
chr20:63933104|63933273 hsa-miR-6831-5p 0 1 0
chr20:63933104|63933273 hsa-miR-10396a-3p 1 0 0
chr20:63933104|63933273 hsa-miR-10396b-3p 1 0 0
chr20:63933104|63933273 hsa-miR-1914-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6791-3p 0 1 0
chr20:63933104|63933273 hsa-miR-4700-5p 0 1 0
chr20:63933104|63933273 hsa-miR-6756-3p 1 1 0
chr20:63933104|63933273 hsa-miR-6805-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6810-3p 1 1 0
chr20:63933104|63933273 hsa-miR-6829-3p 1 1 0
chr20:63933104|63933273 hsa-miR-3928-5p 1 0 0
chr20:63933104|63933273 hsa-miR-6823-3p 1 0 0
chr20:63933104|63933273 hsa-miR-6884-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr20:63933104|63933273
ORF Type ORF1
Protein Length 54
Nucleotide Length 162
Protein Sequence MHSLGWLLRAMSELGPRVSRQAGKGASGGSSGWSEPEPSHTASSSALSLQGPLQ
Nucleotide Sequence CTGCACAGCCTCGGGTGGCTGCTGAGGGCAATGAGTGAGCTGGGGCCACGGGTCAGCAGGCAGGCAGGGAAGGGGGCTTCAGGAGGCTCATCTGGTTGGTCCGAGCCAGAGCCATCACACACAGCCTCCTCCTCAGCTTTATCTCTACAGGGACCTCTGCAA

CircID chr20:63933104|63933273
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MRRRLCVMALARTNQMSLLKPPSLPAC
Nucleotide Sequence CTGAGGAGGAGGCTGTGTGTGATGGCTCTGGCTCGGACCAACCAGATGAGCCTCCTGAAGCCCCCTTCCCTGCCTGCCTGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites