CircRNA Information

General Information
circRNA Basic Information
CircID chr20:63934658|63934914
Strand -
CircType exon
Host Gene ENSG00000101152.9;
Algorism CIRI2;
Sequence TGCTCAGTGTTTGTGAACTTTCCTAGTTCTCTATGTTGTTAGTGCAGCCAGCACCCAGTGGGGACCTACTAGAAAAAGGAACTGGCATGCACACGTGCCCAGCAGGAAAAGCTTCGTCTTCACGTCGGCTGCTGCCATCCAGAAGAGGCCCTGGAGCCTCACGCCGTCGAGGCTGCTCTCAGGCGTTCTGTTCCGGGCGAGGCTTGTGCTGCAAGGAAGGGCACCAGCATGCAGGCTGCCACTGGAGGGTCCGGGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr20:63934658|63934914 hsa-miR-107 0 0 1
chr20:63934658|63934914 hsa-miR-141-5p 0 0 1
chr20:63934658|63934914 hsa-miR-141-3p 0 0 1
chr20:63934658|63934914 hsa-miR-146a-5p 0 0 1
chr20:63934658|63934914 hsa-miR-146a-3p 0 0 1
chr20:63934658|63934914 hsa-miR-200a-5p 0 0 1
chr20:63934658|63934914 hsa-miR-200a-3p 0 0 1
chr20:63934658|63934914 hsa-miR-376c-5p 0 0 1
chr20:63934658|63934914 hsa-miR-376c-3p 0 0 1
chr20:63934658|63934914 hsa-miR-370-5p 0 0 1
chr20:63934658|63934914 hsa-miR-370-3p 0 0 1
chr20:63934658|63934914 hsa-miR-325 0 1 1
chr20:63934658|63934914 hsa-miR-596 0 0 1
chr20:63934658|63934914 hsa-miR-604 0 0 1
chr20:63934658|63934914 hsa-miR-612 0 1 1
chr20:63934658|63934914 hsa-miR-614 0 0 1
chr20:63934658|63934914 hsa-miR-647 0 1 1
chr20:63934658|63934914 hsa-miR-1301-5p 0 0 1
chr20:63934658|63934914 hsa-miR-1301-3p 0 0 1
chr20:63934658|63934914 hsa-miR-938 0 0 1
chr20:63934658|63934914 hsa-miR-1299 0 0 1
chr20:63934658|63934914 hsa-miR-513b-5p 0 0 1
chr20:63934658|63934914 hsa-miR-513b-3p 0 0 1
chr20:63934658|63934914 hsa-miR-1825 0 0 1
chr20:63934658|63934914 hsa-miR-885-3p 0 0 1
chr20:63934658|63934914 hsa-miR-485-5p 0 0 1
chr20:63934658|63934914 hsa-miR-199a-5p 0 0 1
chr20:63934658|63934914 hsa-miR-628-3p 0 0 1
chr20:63934658|63934914 hsa-miR-502-5p 0 0 1
chr20:63934658|63934914 hsa-miR-199b-5p 0 0 1
chr20:63934658|63934914 hsa-miR-146b-5p 0 0 1
chr20:63934658|63934914 hsa-miR-103 0 0 1
chr20:63934658|63934914 hsa-miR-138 0 0 1
chr20:63934658|63934914 hsa-miR-1285 0 0 1
chr20:63934658|63934914 hsa-miR-516b 0 0 1
chr20:63934658|63934914 hsa-miR-1193 0 1 0
chr20:63934658|63934914 hsa-miR-3918 0 1 0
chr20:63934658|63934914 hsa-miR-4512 0 1 0
chr20:63934658|63934914 hsa-miR-3976 0 1 0
chr20:63934658|63934914 hsa-miR-4666b 0 1 0
chr20:63934658|63934914 hsa-miR-5706 0 1 0
chr20:63934658|63934914 hsa-miR-6078 0 1 0
chr20:63934658|63934914 hsa-miR-6860 0 1 0
chr20:63934658|63934914 hsa-miR-432-3p 0 1 0
chr20:63934658|63934914 hsa-miR-6861-5p 1 0 0
chr20:63934658|63934914 hsa-miR-3692-5p 0 1 0
chr20:63934658|63934914 hsa-miR-139-3p 1 0 0
chr20:63934658|63934914 hsa-miR-6741-5p 1 1 0
chr20:63934658|63934914 hsa-miR-191-5p 0 1 0
chr20:63934658|63934914 hsa-miR-5589-5p 0 1 0
chr20:63934658|63934914 hsa-miR-4728-3p 1 0 0
chr20:63934658|63934914 hsa-miR-6772-5p 1 0 0
chr20:63934658|63934914 hsa-miR-6770-5p 1 0 0
chr20:63934658|63934914 hsa-miR-7109-3p 0 1 0
chr20:63934658|63934914 hsa-miR-619-3p 1 0 0
chr20:63934658|63934914 hsa-miR-3667-3p 0 1 0
chr20:63934658|63934914 hsa-miR-3925-5p 0 1 0
chr20:63934658|63934914 hsa-miR-3619-3p 1 0 0
chr20:63934658|63934914 hsa-miR-3074-5p 0 1 0
chr20:63934658|63934914 hsa-miR-328-3p 1 0 0
chr20:63934658|63934914 hsa-miR-6761-5p 1 1 0
chr20:63934658|63934914 hsa-miR-10400-5p 1 1 0
chr20:63934658|63934914 hsa-miR-4763-3p 1 0 0
chr20:63934658|63934914 hsa-miR-5189-5p 0 1 0
chr20:63934658|63934914 hsa-miR-4685-5p 0 1 0
chr20:63934658|63934914 hsa-miR-3187-5p 0 1 0
chr20:63934658|63934914 hsa-miR-3085-3p 0 1 0
chr20:63934658|63934914 hsa-miR-6781-3p 0 1 0
chr20:63934658|63934914 hsa-miR-6504-5p 0 1 0
chr20:63934658|63934914 hsa-miR-6733-5p 0 1 0
chr20:63934658|63934914 hsa-miR-4524b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr20:63934658|63934914
ORF Type ORF1
Protein Length 58
Nucleotide Length 174
Protein Sequence MACTRAQQEKLRLHVGCCHPEEALEPHAVEAALRRSVPGEACAARKGTSMQAATGGSG
Nucleotide Sequence CTGGCATGCACACGTGCCCAGCAGGAAAAGCTTCGTCTTCACGTCGGCTGCTGCCATCCAGAAGAGGCCCTGGAGCCTCACGCCGTCGAGGCTGCTCTCAGGCGTTCTGTTCCGGGCGAGGCTTGTGCTGCAAGGAAGGGCACCAGCATGCAGGCTGCCACTGGAGGGTCCGGG
CircID chr20:63934658|63934914
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MLSGVLFRARLVLQGRAPACRLPLEGPG
Nucleotide Sequence CTGCTCTCAGGCGTTCTGTTCCGGGCGAGGCTTGTGCTGCAAGGAAGGGCACCAGCATGCAGGCTGCCACTGGAGGGTCCGGGT
CircID chr20:63934658|63934914
ORF Type ORF3
Protein Length 75
Nucleotide Length 225
Protein Sequence MLLVQPAPSGDLLEKGTGMHTCPAGKASSSRRLLPSRRGPGASRRRGCSQAFCSGRGLCCKEGHQHAGCHWRVRV
Nucleotide Sequence ATGTTGTTAGTGCAGCCAGCACCCAGTGGGGACCTACTAGAAAAAGGAACTGGCATGCACACGTGCCCAGCAGGAAAAGCTTCGTCTTCACGTCGGCTGCTGCCATCCAGAAGAGGCCCTGGAGCCTCACGCCGTCGAGGCTGCTCTCAGGCGTTCTGTTCCGGGCGAGGCTTGTGCTGCAAGGAAGGGCACCAGCATGCAGGCTGCCACTGGAGGGTCCGGGTG
CircID chr20:63934658|63934914
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MDGSSRREDEAFPAGHVCMPVPFSSRSPLGAGCTNNIEN
Nucleotide Sequence CTGGATGGCAGCAGCCGACGTGAAGACGAAGCTTTTCCTGCTGGGCACGTGTGCATGCCAGTTCCTTTTTCTAGTAGGTCCCCACTGGGTGCTGGCTGCACTAACAACATAGAGAACTAG
CircID chr20:63934658|63934914
ORF Type ORF5
Protein Length 67
Nucleotide Length 204
Protein Sequence MHAGALPCSTSLARNRTPESSLDGVRLQGLFWMAAADVKTKLFLLGTCACQFLFLVGPHWVLAALTT
Nucleotide Sequence CTGCATGCTGGTGCCCTTCCTTGCAGCACAAGCCTCGCCCGGAACAGAACGCCTGAGAGCAGCCTCGACGGCGTGAGGCTCCAGGGCCTCTTCTGGATGGCAGCAGCCGACGTGAAGACGAAGCTTTTCCTGCTGGGCACGTGTGCATGCCAGTTCCTTTTTCTAGTAGGTCCCCACTGGGTGCTGGCTGCACTAACAACATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab