CircNet

General Information

circRNA Basic Information

CircID	chr20:63940294\|63940476
Strand	+
CircType	exon
Host Gene	ENSG00000198276.12;
Algorism	CIRI2;
Sequence	CTGAGGCTGCCCAAGGACATCAGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCGTGCTCCTGGTGAGTGAGCCCTGGGTAGGCGGGGCAGGTTCAGGCAGAGGTGGGATTTACCTGCCCAATACACTCGGTAGGACCACGACGTGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr20:63940294\|63940476	hsa-miR-605-5p	0	0	1
chr20:63940294\|63940476	hsa-miR-605-3p	0	0	1
chr20:63940294\|63940476	hsa-miR-635	0	0	1
chr20:63940294\|63940476	hsa-miR-665	0	0	1
chr20:63940294\|63940476	hsa-miR-1226-5p	0	0	1
chr20:63940294\|63940476	hsa-miR-1226-3p	0	0	1
chr20:63940294\|63940476	hsa-miR-1224-3p	0	0	1
chr20:63940294\|63940476	hsa-miR-324-3p	0	0	1
chr20:63940294\|63940476	hsa-miR-455-3p	0	1	1
chr20:63940294\|63940476	hsa-miR-1260	0	0	1
chr20:63940294\|63940476	hsa-miR-1280	0	0	1
chr20:63940294\|63940476	hsa-miR-1201	0	0	1
chr20:63940294\|63940476	hsa-miR-1185	0	0	1
chr20:63940294\|63940476	hsa-miR-612	1	0	0
chr20:63940294\|63940476	hsa-miR-1260a	1	1	0
chr20:63940294\|63940476	hsa-miR-3138	0	1	0
chr20:63940294\|63940476	hsa-miR-1260b	1	1	0
chr20:63940294\|63940476	hsa-miR-4284	0	1	0
chr20:63940294\|63940476	hsa-miR-4420	1	0	0
chr20:63940294\|63940476	hsa-miR-4440	0	1	0
chr20:63940294\|63940476	hsa-miR-4462	0	1	0
chr20:63940294\|63940476	hsa-miR-4767	1	0	0
chr20:63940294\|63940476	hsa-miR-6081	1	0	0
chr20:63940294\|63940476	hsa-miR-138-5p	1	0	0
chr20:63940294\|63940476	hsa-miR-7160-5p	1	0	0
chr20:63940294\|63940476	hsa-miR-6845-3p	1	0	0
chr20:63940294\|63940476	hsa-miR-4436b-5p	0	1	0
chr20:63940294\|63940476	hsa-miR-5088-5p	0	1	0
chr20:63940294\|63940476	hsa-miR-4776-3p	0	1	0
chr20:63940294\|63940476	hsa-miR-6869-3p	0	1	0
chr20:63940294\|63940476	hsa-miR-6738-3p	0	1	0
chr20:63940294\|63940476	hsa-miR-6890-3p	0	1	0
chr20:63940294\|63940476	hsa-miR-3680-5p	0	1	0
chr20:63940294\|63940476	hsa-miR-6774-5p	0	1	0
chr20:63940294\|63940476	hsa-miR-3127-3p	1	0	0
chr20:63940294\|63940476	hsa-miR-4685-5p	0	1	0
chr20:63940294\|63940476	hsa-miR-6764-5p	0	1	0
chr20:63940294\|63940476	hsa-miR-4769-3p	0	1	0
chr20:63940294\|63940476	hsa-miR-487a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr20:63940294\|63940476
ORF Type	ORF1
Protein Length	61
Nucleotide Length	183
Protein Sequence	LRLPKDISDDHVILMDCTVSTGAAAMMAVRVLLVSEPWVGGAGSGRGGIYLPNTLGRTTTC
Nucleotide Sequence	CTGAGGCTGCCCAAGGACATCAGCGATGACCACGTGATCCTCATGGACTGCACCGTGTCCACGGGCGCGGCGGCCATGATGGCAGTGCGCGTGCTCCTGGTGAGTGAGCCCTGGGTAGGCGGGGCAGGTTCAGGCAGAGGTGGGATTTACCTGCCCAATACACTCGGTAGGACCACGACGTGC

CircID	chr20:63940294\|63940476
ORF Type	ORF2
Protein Length	45
Nucleotide Length	135
Protein Sequence	MPEPAPPTQGSLTRSTRTAIMAAAPVDTVQSMRITWSSLMSLGSL
Nucleotide Sequence	CTGCCTGAACCTGCCCCGCCTACCCAGGGCTCACTCACCAGGAGCACGCGCACTGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGAGGATCACGTGGTCATCGCTGATGTCCTTGGGCAGCCTC

CircID	chr20:63940294\|63940476
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MNLPRLPRAHSPGARALPSWPPRPWTRCSP
Nucleotide Sequence	CTGAACCTGCCCCGCCTACCCAGGGCTCACTCACCAGGAGCACGCGCACTGCCATCATGGCCGCCGCGCCCGTGGACACGGTGCAGTCCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information