CircNet

General Information

circRNA Basic Information

CircID	chr21:17560702\|17565611
Strand	+
CircType	exon
Host Gene	ENSG00000154639.18;
Algorism	find_circ;CIRI2;CIRC
Sequence	AAATGACTTCATCTGTTATATCTGTAAAAAATGCCTCTTCTGAGTACTCTGGGACATACAGCTGTACAGTCAGAAACAGAGTGGGCTCTGATCAGTGCCTGTTGCGTCTAAACGTTGTCCCTCGGAAGATGTGCCACCTCCAAAGAGCCGTACGTCCACTGCCAGAAGCTACATCGGCAGTAATCATTCATCCCTGGGGTCCATGTCTCCTTCCAACATGGAAGGATATTCCAAGACTCAGTATAACCAAGTACCAAGTGAAGACTTTGAACGCACTCCTCAGAGTCCGACTCTCCCACCTGCTAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr21:17560702\|17565611	hsa-miR-141-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr21:17560702\|17565611
ORF Type	ORF1
Protein Length	101
Nucleotide Length	303
Protein Sequence	MTSSVISVKNASSEYSGTYSCTVRNRVGSDQCLLRLNVVPRKMCHLQRAVRPLPEATSAVIIHPWGPCLLPTWKDIPRLSITKYQVKTLNALLRVRLSHLL
Nucleotide Sequence	ATGACTTCATCTGTTATATCTGTAAAAAATGCCTCTTCTGAGTACTCTGGGACATACAGCTGTACAGTCAGAAACAGAGTGGGCTCTGATCAGTGCCTGTTGCGTCTAAACGTTGTCCCTCGGAAGATGTGCCACCTCCAAAGAGCCGTACGTCCACTGCCAGAAGCTACATCGGCAGTAATCATTCATCCCTGGGGTCCATGTCTCCTTCCAACATGGAAGGATATTCCAAGACTCAGTATAACCAAGTACCAAGTGAAGACTTTGAACGCACTCCTCAGAGTCCGACTCTCCCACCTGCTA

CircID	chr21:17560702\|17565611
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MSPSNMEGYSKTQYNQVPSEDFERTPQSPTLPPAK
Nucleotide Sequence	ATGTCTCCTTCCAACATGGAAGGATATTCCAAGACTCAGTATAACCAAGTACCAAGTGAAGACTTTGAACGCACTCCTCAGAGTCCGACTCTCCCACCTGCTAAG

CircID	chr21:17560702\|17565611
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MITADVASGSGRTALWRWHIFRGTTFRRNRH*
Nucleotide Sequence	ATGATTACTGCCGATGTAGCTTCTGGCAGTGGACGTACGGCTCTTTGGAGGTGGCACATCTTCCGAGGGACAACGTTTAGACGCAACAGGCACTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr21:17560702\|17565611	NOP56	0	1	1
chr21:17560702\|17565611	MOV10	0	16	0
chr21:17560702\|17565611	ELAVL1	0	17	2
chr21:17560702\|17565611	ELAVL3	0	1	0
chr21:17560702\|17565611	SF3B4	0	1	0
chr21:17560702\|17565611	FAM120A	0	7	0
chr21:17560702\|17565611	PRPF8	0	2	1
chr21:17560702\|17565611	YTHDF1	0	1	0
chr21:17560702\|17565611	UPF1	1	20	0
chr21:17560702\|17565611	TAF15	0	2	0
chr21:17560702\|17565611	FMR1	0	9	1
chr21:17560702\|17565611	CNBP	0	1	0
chr21:17560702\|17565611	FUS	1	7	0
chr21:17560702\|17565611	CPSF7	0	0	1
chr21:17560702\|17565611	SRSF1	0	0	2
chr21:17560702\|17565611	NOP58	1	4	0
chr21:17560702\|17565611	U2AF1	1	0	1
chr21:17560702\|17565611	U2AF2	9	6	1
chr21:17560702\|17565611	SRSF9	1	0	0
chr21:17560702\|17565611	DDX54	0	0	1
chr21:17560702\|17565611	HNRNPM	1	0	0
chr21:17560702\|17565611	PTBP1	0	0	1
chr21:17560702\|17565611	HNRNPC	5	1	0
chr21:17560702\|17565611	TRA2A	0	0	1
chr21:17560702\|17565611	HNRNPA2B1	0	4	0
chr21:17560702\|17565611	ZNF184	0	0	2
chr21:17560702\|17565611	LARP4B	0	1	0
chr21:17560702\|17565611	MSI1	0	3	0
chr21:17560702\|17565611	HNRNPA1	0	2	0
chr21:17560702\|17565611	LIN28B	0	5	2
chr21:17560702\|17565611	LIN28A	0	1	0
chr21:17560702\|17565611	RANGAP1	0	0	1
chr21:17560702\|17565611	SND1	1	2	5
chr21:17560702\|17565611	IGF2BP1	0	3	1
chr21:17560702\|17565611	IGF2BP3	0	5	3
chr21:17560702\|17565611	IGF2BP2	0	2	0
chr21:17560702\|17565611	TARDBP	2	1	0
chr21:17560702\|17565611	BUD13	2	0	3
chr21:17560702\|17565611	RBFOX2	1	1	0
chr21:17560702\|17565611	RBM47	0	4	1
chr21:17560702\|17565611	TIA1	0	3	0
chr21:17560702\|17565611	RNF219	0	1	0
chr21:17560702\|17565611	AGO3	0	1	0
chr21:17560702\|17565611	DKC1	1	0	0
chr21:17560702\|17565611	AGO2	0	13	1
chr21:17560702\|17565611	AGO1	0	4	0
chr21:17560702\|17565611	EIF4A3	1	5	3
chr21:17560702\|17565611	FBL	0	1	1

CircRNA Information