CircNet

General Information

circRNA Basic Information

CircID	chr21:25954590\|25976028
Strand	-
CircType	exon
Host Gene	ENSG00000142192.20;
Algorism	find_circ;CIRI2;CIRC
Sequence	GTCATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGTGGAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGCTGGTGGAGACACACATGGCCAGAGTGGAAGCCATGCTCAATGACCGCCGCCGCCTGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGTATGTCCGCGCAGAACAGAAGGACAGACAGCACACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGTTATGACACACCTCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCTCCCTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATTCAGGATGAAGTTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr21:25954590\|25976028
ORF Type	ORF1
Protein Length	153
Nucleotide Length	459
Protein Sequence	MREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEV
Nucleotide Sequence	ATGAGAGAATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGTGGAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGCTGGTGGAGACACACATGGCCAGAGTGGAAGCCATGCTCAATGACCGCCGCCGCCTGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCTAAAGAAGTATGTCCGCGCAGAACAGAAGGACAGACAGCACACCCTAAAGCATTTCGAGCATGTGCGCATGGTGGATCCCAAGAAAGCCGCTCAGATCCGGTCCCAGGTTATGACACACCTCCGTGTGATTTATGAGCGCATGAATCAGTCTCTCTCCCTGCTCTACAACGTGCCTGCAGTGGCCGAGGAGATTCAGGATGAAGTT

CircID	chr21:25954590\|25976028
ORF Type	ORF2
Protein Length	46
Nucleotide Length	138
Protein Sequence	MASTLAMCVSTSCCLSLAASCSKDSTFSWKCWITAFLSALGKFFA*
Nucleotide Sequence	ATGGCTTCCACTCTGGCCATGTGTGTCTCCACCAGCTGCTGTCTCTCGTTGGCTGCTTCCTGTTCCAAAGATTCCACTTTCTCCTGGAAATGCTGGATAACTGCCTTCTTATCAGCTTTAGGCAAGTTCTTTGCTTGA

CircID	chr21:25954590\|25976028
ORF Type	ORF3
Protein Length	84
Nucleotide Length	252
Protein Sequence	ENGKRQNVKQRTCLKLIRRQLSSISRRKWNLWNRKQPTRDSSWWRHTWPEWKPCSMTAAAWPWRTTSPLCRLFLLGLVTCSIC*
Nucleotide Sequence	GAGAATGGGAAGAGGCAGAACGTCAAGCAAAGAACTTGCCTAAAGCTGATAAGAAGGCAGTTATCCAGCATTTCCAGGAGAAAGTGGAATCTTTGGAACAGGAAGCAGCCAACGAGAGACAGCAGCTGGTGGAGACACACATGGCCAGAGTGGAAGCCATGCTCAATGACCGCCGCCGCCTGGCCCTGGAGAACTACATCACCGCTCTGCAGGCTGTTCCTCCTCGGCCTCGTCACGTGTTCAATATGCTAA

CircID	chr21:25954590\|25976028
ORF Type	ORF4
Protein Length	81
Nucleotide Length	243
Protein Sequence	VTRPRRNSLQSGDVVLQGQAAAVIEHGFHSGHVCLHQLLSLVGCFLFQRFHFLLEMLDNCLLISFRQVLCLTFCLFPFSHD
Nucleotide Sequence	GTGACGAGGCCGAGGAGGAACAGCCTGCAGAGCGGTGATGTAGTTCTCCAGGGCCAGGCGGCGGCGGTCATTGAGCATGGCTTCCACTCTGGCCATGTGTGTCTCCACCAGCTGCTGTCTCTCGTTGGCTGCTTCCTGTTCCAAAGATTCCACTTTCTCCTGGAAATGCTGGATAACTGCCTTCTTATCAGCTTTAGGCAAGTTCTTTGCTTGACGTTCTGCCTCTTCCCATTCTCTCATGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr21:25954590\|25976028	NOP56	2	2	0
chr21:25954590\|25976028	ELAVL1	2	2	5
chr21:25954590\|25976028	NUMA1	0	0	1
chr21:25954590\|25976028	SF3B4	0	1	1
chr21:25954590\|25976028	TAF15	2	0	0
chr21:25954590\|25976028	FMR1	0	0	2
chr21:25954590\|25976028	AGO2	0	1	11
chr21:25954590\|25976028	DGCR8	0	1	1
chr21:25954590\|25976028	SRSF1	0	2	5
chr21:25954590\|25976028	NOP58	2	0	8
chr21:25954590\|25976028	SRSF3	0	0	1
chr21:25954590\|25976028	U2AF2	4	4	1
chr21:25954590\|25976028	DDX54	0	1	13
chr21:25954590\|25976028	RBM10	1	0	0
chr21:25954590\|25976028	PTBP1	0	1	3
chr21:25954590\|25976028	TRA2A	0	0	1
chr21:25954590\|25976028	ZNF184	0	0	1
chr21:25954590\|25976028	HNRNPA1	0	2	0
chr21:25954590\|25976028	ZC3H7B	0	0	1
chr21:25954590\|25976028	LARP7	1	0	1
chr21:25954590\|25976028	AUH	0	0	2
chr21:25954590\|25976028	ACIN1	1	1	8
chr21:25954590\|25976028	LIN28B	1	1	6
chr21:25954590\|25976028	LIN28A	0	0	3
chr21:25954590\|25976028	BCCIP	0	0	1
chr21:25954590\|25976028	SND1	0	1	8
chr21:25954590\|25976028	IGF2BP1	0	0	1
chr21:25954590\|25976028	BUD13	0	0	3
chr21:25954590\|25976028	IGF2BP3	0	0	5
chr21:25954590\|25976028	IGF2BP2	0	3	9
chr21:25954590\|25976028	TARDBP	1	0	0
chr21:25954590\|25976028	DICER1	0	0	2
chr21:25954590\|25976028	RBM47	0	1	5
chr21:25954590\|25976028	CSTF2T	0	0	1
chr21:25954590\|25976028	FUS	0	2	0
chr21:25954590\|25976028	AIFM1	0	0	1
chr21:25954590\|25976028	EIF4A3	4	4	9
chr21:25954590\|25976028	FBL	1	0	8

CircRNA Information