CircRNA Information

General Information
circRNA Basic Information
CircID chr21:28730240|28730450
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCAGATCCCTGATCCATAGAAATTGTGAGAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTTGAGACAAGGTTTGCCCAGGCTGGAGTGCAGTGGTGTGATCATGGCTTACTGCAGCCTTGACCTCCCAGGCTCAAGCGATCCTGCTACCTCAGCCTCCTGAGTAGCTGTGACTACAGGCTCATCCCACCGTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:28730240|28730450 hsa-let-7b-5p 0 0 1
chr21:28730240|28730450 hsa-let-7b-3p 0 0 1
chr21:28730240|28730450 hsa-let-7c-5p 0 0 1
chr21:28730240|28730450 hsa-let-7c-3p 0 0 1
chr21:28730240|28730450 hsa-let-7d-5p 0 0 1
chr21:28730240|28730450 hsa-let-7d-3p 0 0 1
chr21:28730240|28730450 hsa-let-7e-5p 0 0 1
chr21:28730240|28730450 hsa-let-7e-3p 0 0 1
chr21:28730240|28730450 hsa-miR-98-5p 0 0 1
chr21:28730240|28730450 hsa-miR-98-3p 0 0 1
chr21:28730240|28730450 hsa-let-7g-5p 0 0 1
chr21:28730240|28730450 hsa-let-7g-3p 0 0 1
chr21:28730240|28730450 hsa-let-7i-5p 0 0 1
chr21:28730240|28730450 hsa-let-7i-3p 0 0 1
chr21:28730240|28730450 hsa-miR-202-5p 0 0 1
chr21:28730240|28730450 hsa-miR-202-3p 0 0 1
chr21:28730240|28730450 hsa-miR-510-5p 0 0 1
chr21:28730240|28730450 hsa-miR-510-3p 0 0 1
chr21:28730240|28730450 hsa-miR-612 0 1 1
chr21:28730240|28730450 hsa-miR-661 0 1 1
chr21:28730240|28730450 hsa-miR-766-5p 0 0 1
chr21:28730240|28730450 hsa-miR-766-3p 0 0 1
chr21:28730240|28730450 hsa-miR-1228-5p 0 0 1
chr21:28730240|28730450 hsa-miR-1228-3p 0 0 1
chr21:28730240|28730450 hsa-miR-1229-5p 0 0 1
chr21:28730240|28730450 hsa-miR-1229-3p 0 0 1
chr21:28730240|28730450 hsa-miR-1246 0 0 1
chr21:28730240|28730450 hsa-miR-1255a 0 0 1
chr21:28730240|28730450 hsa-miR-512-5p 0 0 1
chr21:28730240|28730450 hsa-miR-485-5p 0 0 1
chr21:28730240|28730450 hsa-miR-508-5p 0 0 1
chr21:28730240|28730450 hsa-miR-342-3p 0 0 1
chr21:28730240|28730450 hsa-miR-371-5p 0 0 1
chr21:28730240|28730450 hsa-miR-1255b 0 0 1
chr21:28730240|28730450 hsa-let-7a 0 0 1
chr21:28730240|28730450 hsa-let-7f 0 0 1
chr21:28730240|28730450 hsa-miR-1285 0 0 1
chr21:28730240|28730450 hsa-miR-768-3p 0 0 1
chr21:28730240|28730450 hsa-miR-220a 0 0 1
chr21:28730240|28730450 hsa-miR-638 1 0 0
chr21:28730240|28730450 hsa-miR-658 1 0 0
chr21:28730240|28730450 hsa-miR-665 1 1 0
chr21:28730240|28730450 hsa-miR-466 1 1 0
chr21:28730240|28730450 hsa-miR-3929 0 1 0
chr21:28730240|28730450 hsa-miR-3937 1 0 0
chr21:28730240|28730450 hsa-miR-4478 0 1 0
chr21:28730240|28730450 hsa-miR-3689c 0 1 0
chr21:28730240|28730450 hsa-miR-4500 0 1 0
chr21:28730240|28730450 hsa-miR-4651 1 0 0
chr21:28730240|28730450 hsa-miR-4656 1 1 0
chr21:28730240|28730450 hsa-miR-5684 0 1 0
chr21:28730240|28730450 hsa-miR-5704 0 1 0
chr21:28730240|28730450 hsa-miR-5787 1 0 0
chr21:28730240|28730450 hsa-miR-6134 0 1 0
chr21:28730240|28730450 hsa-miR-6860 0 1 0
chr21:28730240|28730450 hsa-miR-7703 0 1 0
chr21:28730240|28730450 hsa-miR-8072 1 0 0
chr21:28730240|28730450 hsa-miR-8485 1 1 0
chr21:28730240|28730450 hsa-miR-12122 0 1 0
chr21:28730240|28730450 hsa-miR-6720-5p 0 1 0
chr21:28730240|28730450 hsa-miR-6799-5p 0 1 0
chr21:28730240|28730450 hsa-miR-7851-3p 0 1 0
chr21:28730240|28730450 hsa-miR-5187-5p 0 1 0
chr21:28730240|28730450 hsa-miR-3192-5p 0 1 0
chr21:28730240|28730450 hsa-miR-4695-5p 1 1 0
chr21:28730240|28730450 hsa-miR-7160-5p 0 1 0
chr21:28730240|28730450 hsa-miR-6849-3p 0 1 0
chr21:28730240|28730450 hsa-miR-6742-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6798-5p 1 0 0
chr21:28730240|28730450 hsa-miR-30b-3p 0 1 0
chr21:28730240|28730450 hsa-miR-6786-5p 1 0 0
chr21:28730240|28730450 hsa-miR-7109-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6749-5p 1 0 0
chr21:28730240|28730450 hsa-miR-7162-3p 0 1 0
chr21:28730240|28730450 hsa-let-7f-5p 0 1 0
chr21:28730240|28730450 hsa-let-7a-5p 0 1 0
chr21:28730240|28730450 hsa-miR-4695-3p 1 1 0
chr21:28730240|28730450 hsa-miR-6767-5p 1 1 0
chr21:28730240|28730450 hsa-miR-20b-3p 0 1 0
chr21:28730240|28730450 hsa-miR-1273h-5p 1 1 0
chr21:28730240|28730450 hsa-miR-3689b-3p 0 1 0
chr21:28730240|28730450 hsa-miR-6778-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6787-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6812-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6726-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6756-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6813-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6819-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6780a-5p 0 1 0
chr21:28730240|28730450 hsa-miR-6848-5p 1 0 0
chr21:28730240|28730450 hsa-miR-3187-5p 0 1 0
chr21:28730240|28730450 hsa-miR-6766-5p 1 0 0
chr21:28730240|28730450 hsa-miR-6884-5p 0 1 0
chr21:28730240|28730450 hsa-miR-6807-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr21:28730240|28730450
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MCVCVCVCVCVCLCVFETRFAQAGVQWCDHGLLQP
Nucleotide Sequence ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTTGAGACAAGGTTTGCCCAGGCTGGAGTGCAGTGGTGTGATCATGGCTTACTGCAGCCTTGA

CircID chr21:28730240|28730450
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MIHRNCEKCVCVCVCVCVCVCVCLRQGLPRLECSGVIMAYCSLDLPGSSDPATSAS
Nucleotide Sequence CTGATCCATAGAAATTGTGAGAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTTTGAGACAAGGTTTGCCCAGGCTGGAGTGCAGTGGTGTGATCATGGCTTACTGCAGCCTTGACCTCCCAGGCTCAAGCGATCCTGCTACCTCAGCCTCCTGA

CircID chr21:28730240|28730450
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MITPLHSSLGKPCLKHTQTHTHTHTHTHTHFSQFLWIRDL
Nucleotide Sequence ATGATCACACCACTGCACTCCAGCCTGGGCAAACCTTGTCTCAAACACACACAGACACACACACACACACACACACACACACACACACATTTCTCACAATTTCTATGGATCAGGGATCTG

CircID chr21:28730240|28730450
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MSQTHTDTHTHTHTHTHTFLTISMDQGS
Nucleotide Sequence TTGTCTCAAACACACACAGACACACACACACACACACACACACACACACACACATTTCTCACAATTTCTATGGATCAGGGATCT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites