CircNet

General Information

circRNA Basic Information

CircID	chr21:33551081\|33551253
Strand	+
CircType	exon
Host Gene	ENSG00000159140.16;
Algorism	CIRI2;
Sequence	CTCCAGGGACTGCGACACGGTCATCGTTGACAGCTCCGATGTTGTCACCACAGACTGAACAGAGATCTCCAGCGCCACAGTTGCCACAGGCTGCCCAGGCAACTCTGGCGCCCCAGGCTGCCCTGGCAACTCCAGCACCCCTGTTGCCAGAGGCTGCCCCAAAAGCTCCAGTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr21:33551081\|33551253	hsa-miR-505-5p	0	0	1
chr21:33551081\|33551253	hsa-miR-505-3p	0	0	1
chr21:33551081\|33551253	hsa-miR-612	0	1	1
chr21:33551081\|33551253	hsa-miR-620	0	0	1
chr21:33551081\|33551253	hsa-miR-622	0	0	1
chr21:33551081\|33551253	hsa-miR-661	0	1	1
chr21:33551081\|33551253	hsa-miR-1202	0	0	1
chr21:33551081\|33551253	hsa-miR-1287-5p	0	0	1
chr21:33551081\|33551253	hsa-miR-1287-3p	0	0	1
chr21:33551081\|33551253	hsa-miR-1270	0	0	1
chr21:33551081\|33551253	hsa-miR-486-3p	0	1	1
chr21:33551081\|33551253	hsa-miR-342-5p	0	0	1
chr21:33551081\|33551253	hsa-miR-1285	0	0	1
chr21:33551081\|33551253	hsa-miR-1254	0	0	1
chr21:33551081\|33551253	hsa-miR-549	0	0	1
chr21:33551081\|33551253	hsa-miR-3135b	0	1	0
chr21:33551081\|33551253	hsa-miR-6860	0	1	0
chr21:33551081\|33551253	hsa-miR-8089	1	0	0
chr21:33551081\|33551253	hsa-miR-12115	1	0	0
chr21:33551081\|33551253	hsa-miR-6782-5p	0	1	0
chr21:33551081\|33551253	hsa-miR-5006-5p	0	1	0
chr21:33551081\|33551253	hsa-miR-6852-5p	0	1	0
chr21:33551081\|33551253	hsa-miR-6501-5p	1	1	0
chr21:33551081\|33551253	hsa-miR-208a-5p	0	1	0
chr21:33551081\|33551253	hsa-miR-3140-3p	0	1	0
chr21:33551081\|33551253	hsa-miR-5001-5p	1	0	0
chr21:33551081\|33551253	hsa-miR-6752-5p	1	1	0
chr21:33551081\|33551253	hsa-miR-4632-5p	1	1	0
chr21:33551081\|33551253	hsa-miR-4685-5p	0	1	0
chr21:33551081\|33551253	hsa-miR-6735-5p	0	1	0
chr21:33551081\|33551253	hsa-miR-3187-5p	1	1	0
chr21:33551081\|33551253	hsa-miR-6837-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr21:33551081\|33551253
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MNRDLQRHSCHRLPRQLWRPRLPWQLQHPCCQRLPQKLQ
Nucleotide Sequence	CTGAACAGAGATCTCCAGCGCCACAGTTGCCACAGGCTGCCCAGGCAACTCTGGCGCCCCAGGCTGCCCTGGCAACTCCAGCACCCCTGTTGCCAGAGGCTGCCCCAAAAGCTCCAG

CircID	chr21:33551081\|33551253
ORF Type	ORF2
Protein Length	49
Nucleotide Length	147
Protein Sequence	MTAPMLSPQTEQRSPAPQLPQAAQATLAPQAALATPAPLLPEAAPKAPV
Nucleotide Sequence	TTGACAGCTCCGATGTTGTCACCACAGACTGAACAGAGATCTCCAGCGCCACAGTTGCCACAGGCTGCCCAGGCAACTCTGGCGCCCCAGGCTGCCCTGGCAACTCCAGCACCCCTGTTGCCAGAGGCTGCCCCAAAAGCTCCAGTG

CircID	chr21:33551081\|33551253
ORF Type	ORF3
Protein Length	57
Nucleotide Length	171
Protein Sequence	LELLGQPLATGVLELPGQPGAPELPGQPVATVALEISVQSVVTTSELSTMTVSQSLE
Nucleotide Sequence	CTGGAGCTTTTGGGGCAGCCTCTGGCAACAGGGGTGCTGGAGTTGCCAGGGCAGCCTGGGGCGCCAGAGTTGCCTGGGCAGCCTGTGGCAACTGTGGCGCTGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information