CircRNA Information

General Information
circRNA Basic Information
CircID chr21:36072450|36072633
Strand +
CircType exon
Host Gene ENSG00000159228.11;
Algorism CIRI2;
Sequence CCCGTATGCGCTGCTGGGCCAGCCCTCCTTCTGGTGCACTCCCTTCTTTGTATCCTCCACAAACTTGTTCATGAGCCCCACCAGCTCCTCCTCAGTGATGGTCTCACTGCGGAACTTCTGCTGCAGCTCTGGGCTGCAGCTTTTAAGGGCTCTGACGCTCATGATGCTAGATACGTTCACCACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:36072450|36072633 hsa-miR-107 0 0 1
chr21:36072450|36072633 hsa-miR-320a-5p 0 0 1
chr21:36072450|36072633 hsa-miR-320a-3p 0 0 1
chr21:36072450|36072633 hsa-miR-503-5p 0 0 1
chr21:36072450|36072633 hsa-miR-503-3p 0 0 1
chr21:36072450|36072633 hsa-miR-558 0 0 1
chr21:36072450|36072633 hsa-miR-765 1 0 1
chr21:36072450|36072633 hsa-miR-298 0 1 1
chr21:36072450|36072633 hsa-miR-541-5p 0 0 1
chr21:36072450|36072633 hsa-miR-541-3p 0 0 1
chr21:36072450|36072633 hsa-miR-708-5p 0 0 1
chr21:36072450|36072633 hsa-miR-708-3p 0 0 1
chr21:36072450|36072633 hsa-miR-922 0 0 1
chr21:36072450|36072633 hsa-miR-938 0 1 1
chr21:36072450|36072633 hsa-miR-769-5p 0 0 1
chr21:36072450|36072633 hsa-miR-767-5p 0 0 1
chr21:36072450|36072633 hsa-miR-1184 0 0 1
chr21:36072450|36072633 hsa-miR-654-5p 0 0 1
chr21:36072450|36072633 hsa-miR-28-5p 0 0 1
chr21:36072450|36072633 hsa-miR-524-5p 0 0 1
chr21:36072450|36072633 hsa-miR-320b 0 1 1
chr21:36072450|36072633 hsa-miR-320c 0 1 1
chr21:36072450|36072633 hsa-miR-320d 0 1 1
chr21:36072450|36072633 hsa-miR-520d-5p 0 0 1
chr21:36072450|36072633 hsa-miR-1233 0 0 1
chr21:36072450|36072633 hsa-miR-103 0 0 1
chr21:36072450|36072633 hsa-miR-138 0 0 1
chr21:36072450|36072633 hsa-miR-129-3p 0 0 1
chr21:36072450|36072633 hsa-miR-1185 0 0 1
chr21:36072450|36072633 hsa-miR-762 1 0 0
chr21:36072450|36072633 hsa-miR-3154 0 1 0
chr21:36072450|36072633 hsa-miR-4270 1 0 0
chr21:36072450|36072633 hsa-miR-3907 1 0 0
chr21:36072450|36072633 hsa-miR-4420 0 1 0
chr21:36072450|36072633 hsa-miR-4429 0 1 0
chr21:36072450|36072633 hsa-miR-4437 1 0 0
chr21:36072450|36072633 hsa-miR-4488 1 0 0
chr21:36072450|36072633 hsa-miR-4489 1 0 0
chr21:36072450|36072633 hsa-miR-4492 1 0 0
chr21:36072450|36072633 hsa-miR-4498 1 1 0
chr21:36072450|36072633 hsa-miR-4525 1 0 0
chr21:36072450|36072633 hsa-miR-4689 0 1 0
chr21:36072450|36072633 hsa-miR-4706 1 0 0
chr21:36072450|36072633 hsa-miR-4739 1 0 0
chr21:36072450|36072633 hsa-miR-4748 1 1 0
chr21:36072450|36072633 hsa-miR-4752 1 0 0
chr21:36072450|36072633 hsa-miR-5685 0 1 0
chr21:36072450|36072633 hsa-miR-6127 1 0 0
chr21:36072450|36072633 hsa-miR-8060 1 0 0
chr21:36072450|36072633 hsa-miR-12118 0 1 0
chr21:36072450|36072633 hsa-miR-138-5p 0 1 0
chr21:36072450|36072633 hsa-miR-187-3p 1 0 0
chr21:36072450|36072633 hsa-miR-6734-5p 1 0 0
chr21:36072450|36072633 hsa-miR-504-3p 1 1 0
chr21:36072450|36072633 hsa-miR-323a-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6894-5p 1 1 0
chr21:36072450|36072633 hsa-miR-766-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6833-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4786-5p 0 1 0
chr21:36072450|36072633 hsa-miR-7114-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6880-5p 1 0 0
chr21:36072450|36072633 hsa-miR-7847-3p 1 1 0
chr21:36072450|36072633 hsa-miR-4695-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4722-5p 1 0 0
chr21:36072450|36072633 hsa-miR-3605-5p 0 1 0
chr21:36072450|36072633 hsa-miR-6796-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6732-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6514-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6786-5p 1 0 0
chr21:36072450|36072633 hsa-miR-5088-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4787-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4446-3p 1 1 0
chr21:36072450|36072633 hsa-miR-6824-5p 1 0 0
chr21:36072450|36072633 hsa-miR-3162-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4283 1 1 0
chr21:36072450|36072633 hsa-miR-6502-3p 0 1 0
chr21:36072450|36072633 hsa-miR-1207-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6769b-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6870-5p 1 0 0
chr21:36072450|36072633 hsa-miR-1343-5p 1 0 0
chr21:36072450|36072633 hsa-miR-5001-5p 1 1 0
chr21:36072450|36072633 hsa-miR-6752-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6756-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6769a-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6803-5p 1 0 0
chr21:36072450|36072633 hsa-miR-7110-5p 1 0 0
chr21:36072450|36072633 hsa-miR-11181-3p 1 0 0
chr21:36072450|36072633 hsa-miR-1249-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6751-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6763-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6797-5p 1 0 0
chr21:36072450|36072633 hsa-miR-3620-5p 1 0 0
chr21:36072450|36072633 hsa-miR-10396a-5p 1 0 0
chr21:36072450|36072633 hsa-miR-10396b-5p 1 0 0
chr21:36072450|36072633 hsa-miR-1237-5p 1 0 0
chr21:36072450|36072633 hsa-miR-328-5p 1 1 0
chr21:36072450|36072633 hsa-miR-449c-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4726-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4745-3p 0 1 0
chr21:36072450|36072633 hsa-miR-6858-5p 1 1 0
chr21:36072450|36072633 hsa-miR-6889-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6885-5p 1 0 0
chr21:36072450|36072633 hsa-miR-939-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4758-5p 1 0 0
chr21:36072450|36072633 hsa-miR-4665-5p 1 0 0
chr21:36072450|36072633 hsa-miR-6855-5p 1 0 0
chr21:36072450|36072633 hsa-miR-3679-5p 1 1 0
chr21:36072450|36072633 hsa-miR-4690-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr21:36072450|36072633
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MVHSLLCILHKLVHEPHQLLLSDGLTAELLLQLWAAAFKGSDAHDARYVHH
Nucleotide Sequence CTGGTGCACTCCCTTCTTTGTATCCTCCACAAACTTGTTCATGAGCCCCACCAGCTCCTCCTCAGTGATGGTCTCACTGCGGAACTTCTGCTGCAGCTCTGGGCTGCAGCTTTTAAGGGCTCTGACGCTCATGATGCTAGATACGTTCACCAC
CircID chr21:36072450|36072633
ORF Type ORF2
Protein Length 58
Nucleotide Length 174
Protein Sequence MLGQPSFWCTPFFVSSTNLFMSPTSSSSVMVSLRNFCCSSGLQLLRALTLMMLDTFTT
Nucleotide Sequence CTGCTGGGCCAGCCCTCCTTCTGGTGCACTCCCTTCTTTGTATCCTCCACAAACTTGTTCATGAGCCCCACCAGCTCCTCCTCAGTGATGGTCTCACTGCGGAACTTCTGCTGCAGCTCTGGGCTGCAGCTTTTAAGGGCTCTGACGCTCATGATGCTAGATACGTTCACCACT
CircID chr21:36072450|36072633
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYG
Nucleotide Sequence ATGAGCGTCAGAGCCCTTAAAAGCTGCAGCCCAGAGCTGCAGCAGAAGTTCCGCAGTGAGACCATCACTGAGGAGGAGCTGGTGGGGCTCATGAACAAGTTTGTGGAGGATACAAAGAAGGGAGTGCACCAGAAGGAGGGCTGGCCCAGCAGCGCATACGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab