CircRNA Information

General Information
circRNA Basic Information
CircID chr21:36072592|36072787
Strand +
CircType exon
Host Gene ENSG00000159228.11;
Algorism CIRI2;
Sequence CTTCTTCTGGGCTCTTGGTGGCCTTGGGTCCCGCCATGTCAGTTCTCACCCACCCTGGGCAGCAGGCATTCAGGAGGATCTTGTCCCCTTTCCTCTGCTCACTCAGTTTCCTGGCGTGGATCCTGGACAGAACGGTGACGCCAATCTTCGTCACCCCGTATGCGCTGCTGGGCCAGCCCTCCTTCTGGTGCACTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:36072592|36072787 hsa-miR-198 0 0 1
chr21:36072592|36072787 hsa-miR-146a-5p 0 0 1
chr21:36072592|36072787 hsa-miR-146a-3p 0 0 1
chr21:36072592|36072787 hsa-miR-370-5p 0 0 1
chr21:36072592|36072787 hsa-miR-370-3p 0 0 1
chr21:36072592|36072787 hsa-miR-335-5p 0 0 1
chr21:36072592|36072787 hsa-miR-335-3p 0 0 1
chr21:36072592|36072787 hsa-miR-503-5p 0 0 1
chr21:36072592|36072787 hsa-miR-503-3p 0 0 1
chr21:36072592|36072787 hsa-miR-589-5p 0 0 1
chr21:36072592|36072787 hsa-miR-589-3p 0 0 1
chr21:36072592|36072787 hsa-miR-665 1 1 1
chr21:36072592|36072787 hsa-miR-1262 0 0 1
chr21:36072592|36072787 hsa-miR-767-5p 0 0 1
chr21:36072592|36072787 hsa-miR-146b-5p 1 1 1
chr21:36072592|36072787 hsa-miR-663 0 0 1
chr21:36072592|36072787 hsa-miR-608 1 0 0
chr21:36072592|36072787 hsa-miR-612 1 0 0
chr21:36072592|36072787 hsa-miR-663a 1 0 0
chr21:36072592|36072787 hsa-miR-658 1 0 0
chr21:36072592|36072787 hsa-miR-762 1 0 0
chr21:36072592|36072787 hsa-miR-711 0 1 0
chr21:36072592|36072787 hsa-miR-3131 1 0 0
chr21:36072592|36072787 hsa-miR-3154 1 1 0
chr21:36072592|36072787 hsa-miR-3907 1 0 0
chr21:36072592|36072787 hsa-miR-3916 0 1 0
chr21:36072592|36072787 hsa-miR-3945 1 0 0
chr21:36072592|36072787 hsa-miR-4488 1 0 0
chr21:36072592|36072787 hsa-miR-4492 1 0 0
chr21:36072592|36072787 hsa-miR-4496 1 1 0
chr21:36072592|36072787 hsa-miR-4498 1 1 0
chr21:36072592|36072787 hsa-miR-4513 1 0 0
chr21:36072592|36072787 hsa-miR-4526 1 0 0
chr21:36072592|36072787 hsa-miR-4634 1 0 0
chr21:36072592|36072787 hsa-miR-4651 1 1 0
chr21:36072592|36072787 hsa-miR-4656 1 0 0
chr21:36072592|36072787 hsa-miR-4669 1 0 0
chr21:36072592|36072787 hsa-miR-4675 1 0 0
chr21:36072592|36072787 hsa-miR-4682 1 0 0
chr21:36072592|36072787 hsa-miR-4706 1 0 0
chr21:36072592|36072787 hsa-miR-4721 1 0 0
chr21:36072592|36072787 hsa-miR-4730 1 0 0
chr21:36072592|36072787 hsa-miR-4741 1 0 0
chr21:36072592|36072787 hsa-miR-5092 0 1 0
chr21:36072592|36072787 hsa-miR-5681a 0 1 0
chr21:36072592|36072787 hsa-miR-504-3p 0 1 0
chr21:36072592|36072787 hsa-miR-4726-3p 1 0 0
chr21:36072592|36072787 hsa-miR-6510-5p 1 1 0
chr21:36072592|36072787 hsa-miR-6728-5p 1 0 0
chr21:36072592|36072787 hsa-miR-3692-5p 1 0 0
chr21:36072592|36072787 hsa-miR-1236-5p 1 1 0
chr21:36072592|36072787 hsa-miR-4695-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4722-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4755-3p 1 0 0
chr21:36072592|36072787 hsa-miR-593-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6741-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6748-5p 0 1 0
chr21:36072592|36072787 hsa-miR-2467-3p 1 1 0
chr21:36072592|36072787 hsa-miR-6782-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4738-3p 0 1 0
chr21:36072592|36072787 hsa-miR-4640-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6823-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4713-3p 0 1 0
chr21:36072592|36072787 hsa-miR-485-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6847-5p 0 1 0
chr21:36072592|36072787 hsa-miR-4787-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4446-3p 1 1 0
chr21:36072592|36072787 hsa-miR-3925-5p 1 0 0
chr21:36072592|36072787 hsa-miR-3922-5p 0 1 0
chr21:36072592|36072787 hsa-miR-660-3p 0 1 0
chr21:36072592|36072787 hsa-miR-4661-3p 0 1 0
chr21:36072592|36072787 hsa-miR-744-5p 1 1 0
chr21:36072592|36072787 hsa-miR-4529-5p 1 1 0
chr21:36072592|36072787 hsa-miR-654-3p 0 1 0
chr21:36072592|36072787 hsa-miR-1207-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4763-3p 1 0 0
chr21:36072592|36072787 hsa-miR-6769b-5p 0 1 0
chr21:36072592|36072787 hsa-miR-6816-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6775-5p 1 0 0
chr21:36072592|36072787 hsa-miR-5001-5p 1 1 0
chr21:36072592|36072787 hsa-miR-6756-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6769a-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6722-3p 1 0 0
chr21:36072592|36072787 hsa-miR-6779-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6875-5p 1 0 0
chr21:36072592|36072787 hsa-miR-1915-3p 1 0 0
chr21:36072592|36072787 hsa-miR-3620-5p 1 0 0
chr21:36072592|36072787 hsa-miR-5196-5p 1 1 0
chr21:36072592|36072787 hsa-miR-10396a-5p 1 0 0
chr21:36072592|36072787 hsa-miR-10396b-5p 1 1 0
chr21:36072592|36072787 hsa-miR-10526-3p 0 1 0
chr21:36072592|36072787 hsa-miR-1237-5p 1 0 0
chr21:36072592|36072787 hsa-miR-328-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4685-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4726-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4745-3p 0 1 0
chr21:36072592|36072787 hsa-miR-4749-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6735-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6794-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6846-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6858-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6885-5p 1 0 0
chr21:36072592|36072787 hsa-miR-939-5p 1 0 0
chr21:36072592|36072787 hsa-miR-4758-5p 1 0 0
chr21:36072592|36072787 hsa-miR-7843-5p 1 0 0
chr21:36072592|36072787 hsa-miR-6736-5p 0 1 0
chr21:36072592|36072787 hsa-miR-6750-5p 0 1 0
chr21:36072592|36072787 hsa-miR-6766-5p 0 1 0
chr21:36072592|36072787 hsa-miR-6893-3p 0 1 0
chr21:36072592|36072787 hsa-miR-6859-5p 0 1 0
chr21:36072592|36072787 hsa-miR-6764-5p 0 1 0
chr21:36072592|36072787 hsa-miR-7153-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr21:36072592|36072787
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MGSWWPWVPPCQFSPTLGSRHSGGSCPLSSAHSVSWRGSWTER
Nucleotide Sequence CTGGGCTCTTGGTGGCCTTGGGTCCCGCCATGTCAGTTCTCACCCACCCTGGGCAGCAGGCATTCAGGAGGATCTTGTCCCCTTTCCTCTGCTCACTCAGTTTCCTGGCGTGGATCCTGGACAGAACGGTGA
CircID chr21:36072592|36072787
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MLTQFPGVDPGQNGDANLRHPVCAAGPALLLVHS
Nucleotide Sequence CTGCTCACTCAGTTTCCTGGCGTGGATCCTGGACAGAACGGTGACGCCAATCTTCGTCACCCCGTATGCGCTGCTGGGCCAGCCCTCCTTCTGGTGCACTCC
CircID chr21:36072592|36072787
ORF Type ORF3
Protein Length 60
Nucleotide Length 180
Protein Sequence MVALGPAMSVLTHPGQQAFRRILSPFLCSLSFLAWILDRTVTPIFVTPYALLGQPSFWCT
Nucleotide Sequence TTGGTGGCCTTGGGTCCCGCCATGTCAGTTCTCACCCACCCTGGGCAGCAGGCATTCAGGAGGATCTTGTCCCCTTTCCTCTGCTCACTCAGTTTCCTGGCGTGGATCCTGGACAGAACGGTGACGCCAATCTTCGTCACCCCGTATGCGCTGCTGGGCCAGCCCTCCTTCTGGTGCACT
CircID chr21:36072592|36072787
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEE
Nucleotide Sequence CTGTCCAGGATCCACGCCAGGAAACTGAGTGAGCAGAGGAAAGGGGACAAGATCCTCCTGAATGCCTGCTGCCCAGGGTGGGTGAGAACTGACATGGCGGGACCCAAGGCCACCAAGAGCCCAGAAGAA
CircID chr21:36072592|36072787
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MAQQRIRGDEDWRHRSVQDPRQETE
Nucleotide Sequence CTGGCCCAGCAGCGCATACGGGGTGACGAAGATTGGCGTCACCGTTCTGTCCAGGATCCACGCCAGGAAACTGAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab