CircRNA Information

General Information
circRNA Basic Information
CircID chr21:36072696|36072867
Strand +
CircType exon
Host Gene ENSG00000159228.11;
Algorism CIRI2;
Sequence TCTCTTCTCTGAAACAAATTGTCCATGGGGACCCTCAGCATCTGGGGGCAAAAGGGCCAAGTACACAGGGGTCTCTGCACCTTCTTCTGGGCTCTTGGTGGCCTTGGGTCCCGCCATGTCAGTTCTCACCCACCCTGGGCAGCAGGCATTCAGGAGGATCTTGTCCCCTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:36072696|36072867 hsa-miR-18a-5p 0 0 1
chr21:36072696|36072867 hsa-miR-18a-3p 0 0 1
chr21:36072696|36072867 hsa-miR-146a-5p 0 0 1
chr21:36072696|36072867 hsa-miR-146a-3p 0 0 1
chr21:36072696|36072867 hsa-miR-370-5p 0 0 1
chr21:36072696|36072867 hsa-miR-370-3p 0 0 1
chr21:36072696|36072867 hsa-miR-328-5p 0 0 1
chr21:36072696|36072867 hsa-miR-328-3p 0 0 1
chr21:36072696|36072867 hsa-miR-335-5p 0 0 1
chr21:36072696|36072867 hsa-miR-335-3p 0 0 1
chr21:36072696|36072867 hsa-miR-18b-5p 0 0 1
chr21:36072696|36072867 hsa-miR-18b-3p 0 0 1
chr21:36072696|36072867 hsa-miR-589-5p 0 0 1
chr21:36072696|36072867 hsa-miR-589-3p 0 0 1
chr21:36072696|36072867 hsa-miR-890 0 0 1
chr21:36072696|36072867 hsa-miR-1291 0 0 1
chr21:36072696|36072867 hsa-miR-1253 0 0 1
chr21:36072696|36072867 hsa-miR-1262 0 0 1
chr21:36072696|36072867 hsa-miR-361-3p 0 1 1
chr21:36072696|36072867 hsa-miR-146b-5p 0 1 1
chr21:36072696|36072867 hsa-miR-663 0 0 1
chr21:36072696|36072867 hsa-miR-608 1 0 0
chr21:36072696|36072867 hsa-miR-663a 1 0 0
chr21:36072696|36072867 hsa-miR-665 1 0 0
chr21:36072696|36072867 hsa-miR-1202 1 0 0
chr21:36072696|36072867 hsa-miR-711 0 1 0
chr21:36072696|36072867 hsa-miR-3125 0 1 0
chr21:36072696|36072867 hsa-miR-3131 1 0 0
chr21:36072696|36072867 hsa-miR-3138 1 0 0
chr21:36072696|36072867 hsa-miR-4513 1 0 0
chr21:36072696|36072867 hsa-miR-4526 1 0 0
chr21:36072696|36072867 hsa-miR-4651 1 1 0
chr21:36072696|36072867 hsa-miR-4663 1 0 0
chr21:36072696|36072867 hsa-miR-5681a 0 1 0
chr21:36072696|36072867 hsa-miR-6071 1 0 0
chr21:36072696|36072867 hsa-miR-9718 1 0 0
chr21:36072696|36072867 hsa-miR-12118 0 1 0
chr21:36072696|36072867 hsa-miR-6749-3p 1 0 0
chr21:36072696|36072867 hsa-miR-4731-5p 1 0 0
chr21:36072696|36072867 hsa-miR-4726-3p 1 0 0
chr21:36072696|36072867 hsa-miR-6854-5p 1 0 0
chr21:36072696|36072867 hsa-miR-3692-5p 1 0 0
chr21:36072696|36072867 hsa-miR-6089 1 0 0
chr21:36072696|36072867 hsa-miR-769-5p 0 1 0
chr21:36072696|36072867 hsa-miR-6741-5p 1 0 0
chr21:36072696|36072867 hsa-miR-874-3p 1 0 0
chr21:36072696|36072867 hsa-miR-4728-3p 0 1 0
chr21:36072696|36072867 hsa-miR-6832-3p 0 1 0
chr21:36072696|36072867 hsa-miR-6748-5p 1 1 0
chr21:36072696|36072867 hsa-miR-4787-5p 1 0 0
chr21:36072696|36072867 hsa-miR-3925-5p 1 0 0
chr21:36072696|36072867 hsa-miR-146b-3p 0 1 0
chr21:36072696|36072867 hsa-miR-3922-5p 0 1 0
chr21:36072696|36072867 hsa-miR-3191-3p 1 0 0
chr21:36072696|36072867 hsa-miR-660-3p 0 1 0
chr21:36072696|36072867 hsa-miR-744-5p 0 1 0
chr21:36072696|36072867 hsa-miR-4529-5p 0 1 0
chr21:36072696|36072867 hsa-miR-654-3p 0 1 0
chr21:36072696|36072867 hsa-miR-6851-3p 0 1 0
chr21:36072696|36072867 hsa-miR-6769b-5p 0 1 0
chr21:36072696|36072867 hsa-miR-6743-5p 1 0 0
chr21:36072696|36072867 hsa-miR-6756-5p 1 0 0
chr21:36072696|36072867 hsa-miR-6769a-5p 1 0 0
chr21:36072696|36072867 hsa-miR-6875-5p 1 0 0
chr21:36072696|36072867 hsa-miR-1915-3p 1 0 0
chr21:36072696|36072867 hsa-miR-10396b-5p 1 1 0
chr21:36072696|36072867 hsa-miR-10526-3p 0 1 0
chr21:36072696|36072867 hsa-miR-4685-5p 1 0 0
chr21:36072696|36072867 hsa-miR-4749-5p 1 0 0
chr21:36072696|36072867 hsa-miR-675-5p 1 0 0
chr21:36072696|36072867 hsa-miR-6794-5p 1 0 0
chr21:36072696|36072867 hsa-miR-4758-5p 1 0 0
chr21:36072696|36072867 hsa-miR-3940-5p 1 0 0
chr21:36072696|36072867 hsa-miR-6736-5p 1 1 0
chr21:36072696|36072867 hsa-miR-6750-5p 1 0 0
chr21:36072696|36072867 hsa-miR-6766-5p 0 1 0
chr21:36072696|36072867 hsa-miR-6893-3p 1 1 0
chr21:36072696|36072867 hsa-miR-6764-5p 1 1 0
chr21:36072696|36072867 hsa-miR-4690-3p 1 0 0
chr21:36072696|36072867 hsa-miR-7153-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr21:36072696|36072867
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MSMGTLSIWGQKGQVHRGLCTFFWALGGLGSRHVSSHPPWAAGIQEDLVPF
Nucleotide Sequence TTGTCCATGGGGACCCTCAGCATCTGGGGGCAAAAGGGCCAAGTACACAGGGGTCTCTGCACCTTCTTCTGGGCTCTTGGTGGCCTTGGGTCCCGCCATGTCAGTTCTCACCCACCCTGGGCAGCAGGCATTCAGGAGGATCTTGTCCCCTTT
CircID chr21:36072696|36072867
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MVALGPAMSVLTHPGQQAFRRILSPF
Nucleotide Sequence TTGGTGGCCTTGGGTCCCGCCATGTCAGTTCTCACCCACCCTGGGCAGCAGGCATTCAGGAGGATCTTGTCCCCTTTC
CircID chr21:36072696|36072867
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MKQIVHGDPQHLGAKGPSTQGSLHLLLGSWWPWVPPCQFSPTLGSRHSGGSCPL
Nucleotide Sequence CTGAAACAAATTGTCCATGGGGACCCTCAGCATCTGGGGGCAAAAGGGCCAAGTACACAGGGGTCTCTGCACCTTCTTCTGGGCTCTTGGTGGCCTTGGGTCCCGCCATGTCAGTTCTCACCCACCCTGGGCAGCAGGCATTCAGGAGGATCTTGTCCCCTT
CircID chr21:36072696|36072867
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR
Nucleotide Sequence CTGAATGCCTGCTGCCCAGGGTGGGTGAGAACTGACATGGCGGGACCCAAGGCCACCAAGAGCCCAGAAGAAGGTGCAGAGACCCCTGTGTACTTGGCCCTTTTGCCCCCAGATGCTGAGGGTCCCCATGGACAATTTGTTTCAGAGAAGAGA
CircID chr21:36072696|36072867
ORF Type ORF5
Protein Length 40
Nucleotide Length 120
Protein Sequence MTWRDPRPPRAQKKVQRPLCTWPFCPQMLRVPMDNLFQRR
Nucleotide Sequence CTGACATGGCGGGACCCAAGGCCACCAAGAGCCCAGAAGAAGGTGCAGAGACCCCTGTGTACTTGGCCCTTTTGCCCCCAGATGCTGAGGGTCCCCATGGACAATTTGTTTCAGAGAAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab