CircNet

General Information

circRNA Basic Information

CircID	chr21:37420299\|37478300
Strand	+
CircType	exon
Host Gene	ENSG00000157540.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	TGTTATAGTTTTGCCGCTGGACTCTTCCCTCCCTTCCCCCACCCCATCAGGATGATATGAGACTTGAAAGAAGACGATGCATACAGGAATCTTCTGAATATTGAAAACAGAGAACTATACTGGAAGAACATAGTGTATTAAGACTCATGGAGAGGGAGATGTGATACTGTGTCACTGAGGTCGTTCCAGTCATAGGAGAAATGTTACCACTGGATTGAGGAGGAGAGACTTCAGCATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCATTCCATGCTGCTGGCCTTCAGATGGCTGGACAGATGCCCCATTCACATCAGTACAGTGACCGTCGCCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTTATCATATTCTGACCAGATTCAGCAACCTCTAACTAACCAGGTGATGCCTGATATTGTCATGTTACAGAGGCGGATGCCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAAAACTTTCTGTTGACTTGATCAAAACATACAAGCATATTAATGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr21:37420299\|37478300	hsa-miR-145-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr21:37420299\|37478300
ORF Type	ORF1
Protein Length	80
Nucleotide Length	240
Protein Sequence	MAGQMPHSHQYSDRRQPNISDQQVSALSYSDQIQQPLTNQVMPDIVMLQRRMPQTFRDPATAPLRKLSVDLIKTYKHINE
Nucleotide Sequence	ATGGCTGGACAGATGCCCCATTCACATCAGTACAGTGACCGTCGCCAGCCAAACATAAGTGACCAACAGGTTTCTGCCTTATCATATTCTGACCAGATTCAGCAACCTCTAACTAACCAGGTGATGCCTGATATTGTCATGTTACAGAGGCGGATGCCCCAAACCTTCCGTGACCCAGCAACTGCTCCCCTGAGAAAACTTTCTGTTGACTTGATCAAAACATACAAGCATATTAATGAG

CircID	chr21:37420299\|37478300
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	MIRQKPVGHLCLAGDGHCTDVNGASVQPSEGQQHGMKMTVQAEQMKVCMLKSLLLNPVVTFLL*
Nucleotide Sequence	ATGATAAGGCAGAAACCTGTTGGTCACTTATGTTTGGCTGGCGACGGTCACTGTACTGATGTGAATGGGGCATCTGTCCAGCCATCTGAAGGCCAGCAGCATGGAATGAAAATGACGGTGCAAGCCGAACAGATGAAGGTTTGCATGCTGAAGTCTCTCCTCCTCAATCCAGTGGTAACATTTCTCCTATGA

CircID	chr21:37420299\|37478300
ORF Type	ORF3
Protein Length	49
Nucleotide Length	147
Protein Sequence	MTGTTSVTQYHISLSMSLNTLCSSSIVLCFQYSEDSCMHRLLSSLISS*
Nucleotide Sequence	ATGACTGGAACGACCTCAGTGACACAGTATCACATCTCCCTCTCCATGAGTCTTAATACACTATGTTCTTCCAGTATAGTTCTCTGTTTTCAATATTCAGAAGATTCCTGTATGCATCGTCTTCTTTCAAGTCTCATATCATCCTGA

CircID	chr21:37420299\|37478300
ORF Type	ORF4
Protein Length	43
Nucleotide Length	129
Protein Sequence	MFFQYSSLFSIFRRFLYASSSFKSHIILMGWGKGGKSPAAKL*
Nucleotide Sequence	ATGTTCTTCCAGTATAGTTCTCTGTTTTCAATATTCAGAAGATTCCTGTATGCATCGTCTTCTTTCAAGTCTCATATCATCCTGATGGGGTGGGGGAAGGGAGGGAAGAGTCCAGCGGCAAAACTATAA

CircID	chr21:37420299\|37478300
ORF Type	ORF5
Protein Length	33
Nucleotide Length	99
Protein Sequence	MQTFICSACTVIFIPCCWPSDGWTDAPFTSVQ*
Nucleotide Sequence	ATGCAAACCTTCATCTGTTCGGCTTGCACCGTCATTTTCATTCCATGCTGCTGGCCTTCAGATGGCTGGACAGATGCCCCATTCACATCAGTACAGTGA

CircID	chr21:37420299\|37478300
ORF Type	ORF6
Protein Length	30
Nucleotide Length	90
Protein Sequence	MLVCFDQVNRKFSQGSSCWVTEGLGHPPL*
Nucleotide Sequence	ATGCTTGTATGTTTTGATCAAGTCAACAGAAAGTTTTCTCAGGGGAGCAGTTGCTGGGTCACGGAAGGTTTGGGGCATCCGCCTCTGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr21:37420299\|37478300	NOP56	2	0	0
chr21:37420299\|37478300	MOV10	0	0	2
chr21:37420299\|37478300	ELAVL1	7	6	4
chr21:37420299\|37478300	SF3B4	0	0	1
chr21:37420299\|37478300	CELF2	1	0	0
chr21:37420299\|37478300	CNBP	0	1	0
chr21:37420299\|37478300	UPF1	0	1	0
chr21:37420299\|37478300	TAF15	1	1	0
chr21:37420299\|37478300	FMR1	0	0	6
chr21:37420299\|37478300	TROVE2	0	0	1
chr21:37420299\|37478300	FUS	5	2	2
chr21:37420299\|37478300	SRSF1	1	0	1
chr21:37420299\|37478300	NOP58	0	1	5
chr21:37420299\|37478300	SRSF3	0	0	1
chr21:37420299\|37478300	U2AF1	0	0	1
chr21:37420299\|37478300	U2AF2	16	8	10
chr21:37420299\|37478300	SRSF9	0	0	1
chr21:37420299\|37478300	DDX54	0	0	8
chr21:37420299\|37478300	RBM10	3	0	0
chr21:37420299\|37478300	PCBP2	0	0	1
chr21:37420299\|37478300	SF3A3	1	0	0
chr21:37420299\|37478300	HNRNPL	1	0	0
chr21:37420299\|37478300	HNRNPA1	1	0	0
chr21:37420299\|37478300	ZC3H7B	0	0	1
chr21:37420299\|37478300	MSI2	1	0	2
chr21:37420299\|37478300	ACIN1	0	0	1
chr21:37420299\|37478300	FXR2	0	0	1
chr21:37420299\|37478300	IGF2BP1	0	0	4
chr21:37420299\|37478300	IGF2BP3	0	0	1
chr21:37420299\|37478300	IGF2BP2	2	0	14
chr21:37420299\|37478300	FTO	1	0	0
chr21:37420299\|37478300	TARDBP	1	0	0
chr21:37420299\|37478300	YTHDC1	0	0	1
chr21:37420299\|37478300	BUD13	0	0	3
chr21:37420299\|37478300	RBFOX2	1	0	0
chr21:37420299\|37478300	CSTF2T	0	0	3
chr21:37420299\|37478300	RBM22	0	1	0
chr21:37420299\|37478300	FBL	1	0	7
chr21:37420299\|37478300	EWSR1	2	0	0
chr21:37420299\|37478300	EIF4A3	5	2	5
chr21:37420299\|37478300	AGO2	1	0	4

CircRNA Information