CircRNA Information

General Information
circRNA Basic Information
CircID chr21:39665332|39665496
Strand -
CircType exon
Host Gene ENSG00000183778.16;
Algorism CIRI2;
Sequence CTCCAGACCCTCCCTCAGCTTCCATTATTGCATCCTTTGGTCTCTTCCCAGCAGCATCCAGAGTGATCCTTTGAAAATCTCATTTCTCTGCTCAAAACCCTCCTGAGGTTTCCCATCACCAAGGATATTAAGGATAAAAACCACATCCTTCATACCATTGTCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:39665332|39665496 hsa-miR-539-5p 0 0 1
chr21:39665332|39665496 hsa-miR-539-3p 0 0 1
chr21:39665332|39665496 hsa-miR-607 0 0 1
chr21:39665332|39665496 hsa-miR-889-5p 0 0 1
chr21:39665332|39665496 hsa-miR-889-3p 0 0 1
chr21:39665332|39665496 hsa-miR-1182 1 1 1
chr21:39665332|39665496 hsa-miR-1305 0 0 1
chr21:39665332|39665496 hsa-miR-1265 0 1 1
chr21:39665332|39665496 hsa-miR-1252-5p 0 0 1
chr21:39665332|39665496 hsa-miR-1252-3p 0 0 1
chr21:39665332|39665496 hsa-miR-1321 0 0 1
chr21:39665332|39665496 hsa-miR-671-5p 1 1 1
chr21:39665332|39665496 hsa-miR-501-5p 0 0 1
chr21:39665332|39665496 hsa-miR-362-5p 0 1 1
chr21:39665332|39665496 hsa-miR-516b 0 0 1
chr21:39665332|39665496 hsa-miR-760 1 0 0
chr21:39665332|39665496 hsa-miR-920 1 0 0
chr21:39665332|39665496 hsa-miR-3125 1 0 0
chr21:39665332|39665496 hsa-miR-3132 1 0 0
chr21:39665332|39665496 hsa-miR-3138 0 1 0
chr21:39665332|39665496 hsa-miR-3147 1 0 0
chr21:39665332|39665496 hsa-miR-4443 1 0 0
chr21:39665332|39665496 hsa-miR-4468 1 1 0
chr21:39665332|39665496 hsa-miR-4689 1 0 0
chr21:39665332|39665496 hsa-miR-4739 1 0 0
chr21:39665332|39665496 hsa-miR-5706 0 1 0
chr21:39665332|39665496 hsa-miR-6127 0 1 0
chr21:39665332|39665496 hsa-miR-6130 0 1 0
chr21:39665332|39665496 hsa-miR-6133 0 1 0
chr21:39665332|39665496 hsa-miR-6745 1 0 0
chr21:39665332|39665496 hsa-miR-6860 1 0 0
chr21:39665332|39665496 hsa-miR-8089 1 0 0
chr21:39665332|39665496 hsa-miR-370-3p 1 0 0
chr21:39665332|39665496 hsa-miR-6734-5p 1 0 0
chr21:39665332|39665496 hsa-miR-4687-3p 1 0 0
chr21:39665332|39665496 hsa-miR-6799-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6510-5p 1 0 0
chr21:39665332|39665496 hsa-miR-3692-5p 0 1 0
chr21:39665332|39665496 hsa-miR-6833-5p 1 0 0
chr21:39665332|39665496 hsa-miR-4786-5p 1 1 0
chr21:39665332|39665496 hsa-miR-769-5p 1 1 0
chr21:39665332|39665496 hsa-miR-7160-5p 0 1 0
chr21:39665332|39665496 hsa-miR-6741-5p 1 1 0
chr21:39665332|39665496 hsa-miR-197-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6871-5p 1 1 0
chr21:39665332|39665496 hsa-miR-6829-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6798-5p 1 0 0
chr21:39665332|39665496 hsa-miR-204-3p 0 1 0
chr21:39665332|39665496 hsa-miR-193b-5p 1 1 0
chr21:39665332|39665496 hsa-miR-296-3p 1 0 0
chr21:39665332|39665496 hsa-miR-6771-5p 1 0 0
chr21:39665332|39665496 hsa-miR-92b-5p 1 0 0
chr21:39665332|39665496 hsa-miR-149-3p 0 1 0
chr21:39665332|39665496 hsa-miR-500a-5p 0 1 0
chr21:39665332|39665496 hsa-miR-3664-3p 0 1 0
chr21:39665332|39665496 hsa-miR-1207-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6812-5p 1 0 0
chr21:39665332|39665496 hsa-miR-1343-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6726-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6752-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6803-5p 1 0 0
chr21:39665332|39665496 hsa-miR-7110-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6763-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6779-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6797-5p 1 0 0
chr21:39665332|39665496 hsa-miR-5196-5p 1 1 0
chr21:39665332|39665496 hsa-miR-6735-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6846-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6858-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6883-5p 0 1 0
chr21:39665332|39665496 hsa-miR-939-5p 1 0 0
chr21:39665332|39665496 hsa-miR-3085-5p 1 0 0
chr21:39665332|39665496 hsa-miR-4646-5p 1 1 0
chr21:39665332|39665496 hsa-miR-6750-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6785-5p 0 1 0
chr21:39665332|39665496 hsa-miR-5591-5p 1 0 0
chr21:39665332|39665496 hsa-miR-769-3p 1 0 0
chr21:39665332|39665496 hsa-miR-6529-5p 1 0 0
chr21:39665332|39665496 hsa-miR-6884-5p 1 0 0
chr21:39665332|39665496 hsa-miR-10523-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr21:39665332|39665496
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MLKTLLRFPITKDIKDKNHILHTIVY
Nucleotide Sequence CTGCTCAAAACCCTCCTGAGGTTTCCCATCACCAAGGATATTAAGGATAAAAACCACATCCTTCATACCATTGTCTAC

CircID chr21:39665332|39665496
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MKDVVFILNILGDGKPQEGFEQRNEIFKGSLWMLLGRDQRMQ
Nucleotide Sequence ATGAAGGATGTGGTTTTTATCCTTAATATCCTTGGTGATGGGAAACCTCAGGAGGGTTTTGAGCAGAGAAATGAGATTTTCAAAGGATCACTCTGGATGCTGCTGGGAAGAGACCAAAGGATGCAATAA

CircID chr21:39665332|39665496
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MWFLSLISLVMGNLRRVLSREMRFSKDHSGCCWEETKGCNNGS
Nucleotide Sequence ATGTGGTTTTTATCCTTAATATCCTTGGTGATGGGAAACCTCAGGAGGGTTTTGAGCAGAGAAATGAGATTTTCAAAGGATCACTCTGGATGCTGCTGGGAAGAGACCAAAGGATGCAATAATGGAAGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites