CircRNA Information

General Information
circRNA Basic Information
CircID chr21:41494405|41494578
Strand -
CircType exon
Host Gene ENSG00000184012.10;
Algorism CIRI2;
Sequence GGGGTTGGAAGCCTGCGTCAGGACCCTCGGGGCGTACTGGGGCACGGGGGACGGGTAGTACTGAGCCGGATGCACCTCGTAGACAGTGGGGACCACAGTGGGCTGTGCGGGATAGGGGTTTTCCGGTTGGTATCCATGGTTTTCATAGTAAGGTCCAATAGCTGGTGGTGACCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:41494405|41494578 hsa-miR-99a-5p 0 0 1
chr21:41494405|41494578 hsa-miR-99a-3p 0 0 1
chr21:41494405|41494578 hsa-miR-100-5p 0 0 1
chr21:41494405|41494578 hsa-miR-100-3p 0 0 1
chr21:41494405|41494578 hsa-miR-197-5p 0 0 1
chr21:41494405|41494578 hsa-miR-197-3p 0 0 1
chr21:41494405|41494578 hsa-miR-99b-5p 0 0 1
chr21:41494405|41494578 hsa-miR-99b-3p 0 0 1
chr21:41494405|41494578 hsa-miR-492 0 0 1
chr21:41494405|41494578 hsa-miR-570-5p 0 0 1
chr21:41494405|41494578 hsa-miR-570-3p 0 0 1
chr21:41494405|41494578 hsa-miR-934 0 0 1
chr21:41494405|41494578 hsa-miR-1226-5p 0 0 1
chr21:41494405|41494578 hsa-miR-1226-3p 0 0 1
chr21:41494405|41494578 hsa-miR-1247-5p 0 0 1
chr21:41494405|41494578 hsa-miR-1247-3p 0 0 1
chr21:41494405|41494578 hsa-miR-770-5p 0 1 1
chr21:41494405|41494578 hsa-miR-324-5p 0 0 1
chr21:41494405|41494578 hsa-miR-490-5p 0 1 1
chr21:41494405|41494578 hsa-miR-220b 0 0 1
chr21:41494405|41494578 hsa-miR-24 0 0 1
chr21:41494405|41494578 hsa-miR-484 1 0 0
chr21:41494405|41494578 hsa-miR-4535 0 1 0
chr21:41494405|41494578 hsa-miR-5685 0 1 0
chr21:41494405|41494578 hsa-miR-24-3p 0 1 0
chr21:41494405|41494578 hsa-miR-3189-5p 1 0 0
chr21:41494405|41494578 hsa-miR-4655-3p 1 0 0
chr21:41494405|41494578 hsa-miR-659-5p 1 1 0
chr21:41494405|41494578 hsa-miR-378a-5p 0 1 0
chr21:41494405|41494578 hsa-miR-339-5p 0 1 0
chr21:41494405|41494578 hsa-miR-6741-3p 1 0 0
chr21:41494405|41494578 hsa-miR-6856-3p 0 1 0
chr21:41494405|41494578 hsa-miR-18a-5p 0 1 0
chr21:41494405|41494578 hsa-miR-4693-5p 0 1 0
chr21:41494405|41494578 hsa-miR-10396a-3p 1 0 0
chr21:41494405|41494578 hsa-miR-10396b-3p 1 0 0
chr21:41494405|41494578 hsa-miR-324-3p 1 0 0
chr21:41494405|41494578 hsa-miR-18b-5p 0 1 0
chr21:41494405|41494578 hsa-miR-6792-3p 1 0 0
chr21:41494405|41494578 hsa-miR-4690-3p 1 1 0
chr21:41494405|41494578 hsa-miR-6771-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr21:41494405|41494578
ORF Type ORF1
Protein Length 52
Nucleotide Length 159
Protein Sequence MRQDPRGVLGHGGRVVLSRMHLVDSGDHSGLCGIGVFRLVSMVFIVRSNSWW
Nucleotide Sequence CTGCGTCAGGACCCTCGGGGCGTACTGGGGCACGGGGGACGGGTAGTACTGAGCCGGATGCACCTCGTAGACAGTGGGGACCACAGTGGGCTGTGCGGGATAGGGGTTTTCCGGTTGGTATCCATGGTTTTCATAGTAAGGTCCAATAGCTGGTGGTGA

CircID chr21:41494405|41494578
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MDLTMKTMDTNRKTPIPHSPLWSPLSTRCIRLSTTRPPCPSTPRGS
Nucleotide Sequence TTGGACCTTACTATGAAAACCATGGATACCAACCGGAAAACCCCTATCCCGCACAGCCCACTGTGGTCCCCACTGTCTACGAGGTGCATCCGGCTCAGTACTACCCGTCCCCCGTGCCCCAGTACGCCCCGAGGGTCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites