CircRNA Information

General Information
circRNA Basic Information
CircID chr21:43745324|43745505
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TCTGTCCTCACTATACACTCACGCCCCACTCCCCCTGCCTTAGGCCCTGGTAACGTCTAGTCTGCTTTCTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCCCTGTCACCCAAGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:43745324|43745505 hsa-miR-34b-5p 0 0 1
chr21:43745324|43745505 hsa-miR-34b-3p 0 0 1
chr21:43745324|43745505 hsa-miR-506-5p 0 0 1
chr21:43745324|43745505 hsa-miR-506-3p 0 0 1
chr21:43745324|43745505 hsa-miR-658 1 1 1
chr21:43745324|43745505 hsa-miR-766-5p 0 0 1
chr21:43745324|43745505 hsa-miR-766-3p 0 0 1
chr21:43745324|43745505 hsa-miR-921 0 1 1
chr21:43745324|43745505 hsa-miR-940 1 0 1
chr21:43745324|43745505 hsa-miR-1262 0 0 1
chr21:43745324|43745505 hsa-miR-1224-5p 0 0 1
chr21:43745324|43745505 hsa-miR-574-5p 0 0 1
chr21:43745324|43745505 hsa-miR-508-5p 0 1 1
chr21:43745324|43745505 hsa-miR-1207-5p 1 1 1
chr21:43745324|43745505 hsa-miR-542-3p 0 0 1
chr21:43745324|43745505 hsa-miR-371-5p 0 0 1
chr21:43745324|43745505 hsa-miR-124 0 0 1
chr21:43745324|43745505 hsa-miR-1268 0 0 1
chr21:43745324|43745505 hsa-miR-608 1 0 0
chr21:43745324|43745505 hsa-miR-663a 1 0 0
chr21:43745324|43745505 hsa-miR-762 1 0 0
chr21:43745324|43745505 hsa-miR-1182 1 0 0
chr21:43745324|43745505 hsa-miR-1268a 1 0 0
chr21:43745324|43745505 hsa-miR-1275 1 0 0
chr21:43745324|43745505 hsa-miR-2861 1 0 0
chr21:43745324|43745505 hsa-miR-3141 1 0 0
chr21:43745324|43745505 hsa-miR-3175 1 0 0
chr21:43745324|43745505 hsa-miR-3196 1 0 0
chr21:43745324|43745505 hsa-miR-3918 1 1 0
chr21:43745324|43745505 hsa-miR-1268b 1 1 0
chr21:43745324|43745505 hsa-miR-4455 1 0 0
chr21:43745324|43745505 hsa-miR-4467 1 0 0
chr21:43745324|43745505 hsa-miR-4481 1 0 0
chr21:43745324|43745505 hsa-miR-4488 1 0 0
chr21:43745324|43745505 hsa-miR-4510 1 0 0
chr21:43745324|43745505 hsa-miR-4514 1 0 0
chr21:43745324|43745505 hsa-miR-4525 1 0 0
chr21:43745324|43745505 hsa-miR-4538 0 1 0
chr21:43745324|43745505 hsa-miR-3978 1 0 0
chr21:43745324|43745505 hsa-miR-4651 1 0 0
chr21:43745324|43745505 hsa-miR-4656 1 0 0
chr21:43745324|43745505 hsa-miR-4658 0 1 0
chr21:43745324|43745505 hsa-miR-4706 1 0 0
chr21:43745324|43745505 hsa-miR-4736 1 0 0
chr21:43745324|43745505 hsa-miR-5192 1 0 0
chr21:43745324|43745505 hsa-miR-5698 1 1 0
chr21:43745324|43745505 hsa-miR-5787 1 0 0
chr21:43745324|43745505 hsa-miR-6127 1 0 0
chr21:43745324|43745505 hsa-miR-6129 1 0 0
chr21:43745324|43745505 hsa-miR-6130 1 0 0
chr21:43745324|43745505 hsa-miR-6132 1 0 0
chr21:43745324|43745505 hsa-miR-6133 1 0 0
chr21:43745324|43745505 hsa-miR-7150 1 1 0
chr21:43745324|43745505 hsa-miR-7703 0 1 0
chr21:43745324|43745505 hsa-miR-8072 1 0 0
chr21:43745324|43745505 hsa-miR-12114 1 0 0
chr21:43745324|43745505 hsa-miR-12115 1 0 0
chr21:43745324|43745505 hsa-miR-12120 1 0 0
chr21:43745324|43745505 hsa-miR-12127 0 1 0
chr21:43745324|43745505 hsa-miR-4433b-3p 1 1 0
chr21:43745324|43745505 hsa-miR-4731-5p 1 0 0
chr21:43745324|43745505 hsa-miR-504-3p 1 0 0
chr21:43745324|43745505 hsa-miR-1247-3p 0 1 0
chr21:43745324|43745505 hsa-miR-1273h-3p 1 0 0
chr21:43745324|43745505 hsa-miR-6747-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6765-5p 1 0 0
chr21:43745324|43745505 hsa-miR-7106-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6825-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6799-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6510-5p 1 0 0
chr21:43745324|43745505 hsa-miR-3622a-5p 1 0 0
chr21:43745324|43745505 hsa-miR-7851-3p 1 1 0
chr21:43745324|43745505 hsa-miR-1227-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6089 1 0 0
chr21:43745324|43745505 hsa-miR-6867-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6741-5p 1 0 0
chr21:43745324|43745505 hsa-miR-3622b-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6721-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4655-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6742-5p 1 0 0
chr21:43745324|43745505 hsa-miR-491-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6716-5p 1 0 0
chr21:43745324|43745505 hsa-miR-3151-5p 1 0 0
chr21:43745324|43745505 hsa-miR-3180-3p 1 1 0
chr21:43745324|43745505 hsa-miR-6748-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6732-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6805-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6798-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6782-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4793-3p 0 1 0
chr21:43745324|43745505 hsa-miR-30b-3p 0 1 0
chr21:43745324|43745505 hsa-miR-5006-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6786-5p 1 0 0
chr21:43745324|43745505 hsa-miR-5088-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6853-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6784-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6753-5p 1 1 0
chr21:43745324|43745505 hsa-miR-885-3p 1 0 0
chr21:43745324|43745505 hsa-miR-3127-5p 1 1 0
chr21:43745324|43745505 hsa-miR-1908-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6771-5p 1 0 0
chr21:43745324|43745505 hsa-miR-3614-5p 0 1 0
chr21:43745324|43745505 hsa-miR-6749-5p 0 1 0
chr21:43745324|43745505 hsa-miR-6501-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4787-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6830-5p 1 0 0
chr21:43745324|43745505 hsa-miR-937-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6824-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6781-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6877-5p 1 0 0
chr21:43745324|43745505 hsa-miR-194-3p 1 0 0
chr21:43745324|43745505 hsa-miR-5010-5p 1 0 0
chr21:43745324|43745505 hsa-miR-7112-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6895-5p 1 0 0
chr21:43745324|43745505 hsa-miR-664b-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1296-3p 1 0 0
chr21:43745324|43745505 hsa-miR-6509-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4771 0 1 0
chr21:43745324|43745505 hsa-miR-10400-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1273h-5p 0 1 0
chr21:43745324|43745505 hsa-miR-4763-3p 1 1 0
chr21:43745324|43745505 hsa-miR-6769b-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6787-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6812-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6816-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6865-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6870-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6893-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6775-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1343-5p 1 0 0
chr21:43745324|43745505 hsa-miR-3180 1 0 0
chr21:43745324|43745505 hsa-miR-5001-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6737-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6743-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6752-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6756-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6803-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6819-5p 1 0 0
chr21:43745324|43745505 hsa-miR-7110-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1249-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6722-3p 1 1 0
chr21:43745324|43745505 hsa-miR-6751-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6763-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6774-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6808-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6879-5p 1 1 0
chr21:43745324|43745505 hsa-miR-7111-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1915-3p 1 0 0
chr21:43745324|43745505 hsa-miR-4728-5p 1 0 0
chr21:43745324|43745505 hsa-miR-5196-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6836-5p 1 0 0
chr21:43745324|43745505 hsa-miR-10396b-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1237-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1909-3p 1 0 0
chr21:43745324|43745505 hsa-miR-328-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4632-5p 1 1 0
chr21:43745324|43745505 hsa-miR-4685-5p 1 1 0
chr21:43745324|43745505 hsa-miR-4701-3p 0 1 0
chr21:43745324|43745505 hsa-miR-4726-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4745-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6735-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6777-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6794-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6795-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6846-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6848-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6883-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6887-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6889-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4436b-3p 1 0 0
chr21:43745324|43745505 hsa-miR-4723-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6831-5p 1 0 0
chr21:43745324|43745505 hsa-miR-939-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1238-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4758-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4769-5p 1 0 0
chr21:43745324|43745505 hsa-miR-1266-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6511a-5p 1 0 0
chr21:43745324|43745505 hsa-miR-377-5p 0 1 0
chr21:43745324|43745505 hsa-miR-6855-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6891-5p 1 0 0
chr21:43745324|43745505 hsa-miR-4472 1 0 0
chr21:43745324|43745505 hsa-miR-4716-3p 1 0 0
chr21:43745324|43745505 hsa-miR-6766-5p 1 0 0
chr21:43745324|43745505 hsa-miR-6837-5p 1 1 0
chr21:43745324|43745505 hsa-miR-6807-3p 0 1 0
chr21:43745324|43745505 hsa-miR-367-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr21:43745324|43745505
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MRWSLALSPKLECSGAILAHCNLRLPGSSDSP
Nucleotide Sequence TTGAGATGGAGTCTCGCCCTGTCACCCAAGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCT
CircID chr21:43745324|43745505
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MESRPVTQAGVQWRNLGSLQPPPPGFK
Nucleotide Sequence ATGGAGTCTCGCCCTGTCACCCAAGCTGGAGTGCAGTGGCGCAATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGA
CircID chr21:43745324|43745505
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MNPGGGGCSEPRLRHCTPAWVTGRDSISKKKKKRKQTRRYQGLRQGEWGVSV
Nucleotide Sequence TTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATTGCGCCACTGCACTCCAGCTTGGGTGACAGGGCGAGACTCCATCTCAAAAAAAAAAAAAAAAAGAAAGCAGACTAGACGTTACCAGGGCCTAAGGCAGGGGGAGTGGGGCGTGAGTGTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab