CircRNA Information

General Information
circRNA Basic Information
CircID chr21:43760318|43760503
Strand -
CircType exon
Host Gene ENSG00000160209.17;
Algorism CIRI2;
Sequence AGGCATGCGCCACCACGCTCAGCTGATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTCCTGACCTCAAGTGATCTGCCCGCCTCGGCCTCCCAGAGTGCTGGGATTACAGGCATGAGCCAGTGCACCCGGCGGAATCTTGGAATTTTTATAGACAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:43760318|43760503 hsa-miR-149-5p 0 0 1
chr21:43760318|43760503 hsa-miR-149-3p 0 0 1
chr21:43760318|43760503 hsa-miR-326 0 0 1
chr21:43760318|43760503 hsa-miR-588 0 0 1
chr21:43760318|43760503 hsa-miR-626 0 0 1
chr21:43760318|43760503 hsa-miR-892b 0 1 1
chr21:43760318|43760503 hsa-miR-769-5p 0 0 1
chr21:43760318|43760503 hsa-miR-1207-3p 0 0 1
chr21:43760318|43760503 hsa-miR-330-5p 0 0 1
chr21:43760318|43760503 hsa-miR-548c-3p 0 0 1
chr21:43760318|43760503 hsa-miR-24 0 0 1
chr21:43760318|43760503 hsa-miR-1268a 0 1 0
chr21:43760318|43760503 hsa-miR-3138 1 0 0
chr21:43760318|43760503 hsa-miR-3141 1 0 0
chr21:43760318|43760503 hsa-miR-3929 1 1 0
chr21:43760318|43760503 hsa-miR-1268b 0 1 0
chr21:43760318|43760503 hsa-miR-4453 0 1 0
chr21:43760318|43760503 hsa-miR-4488 1 0 0
chr21:43760318|43760503 hsa-miR-4538 0 1 0
chr21:43760318|43760503 hsa-miR-4663 0 1 0
chr21:43760318|43760503 hsa-miR-5572 0 1 0
chr21:43760318|43760503 hsa-miR-8072 1 0 0
chr21:43760318|43760503 hsa-miR-12114 1 0 0
chr21:43760318|43760503 hsa-miR-6765-5p 1 0 0
chr21:43760318|43760503 hsa-miR-3150a-3p 1 0 0
chr21:43760318|43760503 hsa-miR-6089 1 1 0
chr21:43760318|43760503 hsa-miR-3192-5p 1 1 0
chr21:43760318|43760503 hsa-miR-6880-5p 1 0 0
chr21:43760318|43760503 hsa-miR-6721-5p 1 0 0
chr21:43760318|43760503 hsa-miR-197-5p 1 0 0
chr21:43760318|43760503 hsa-miR-3189-5p 1 0 0
chr21:43760318|43760503 hsa-miR-5589-5p 0 1 0
chr21:43760318|43760503 hsa-miR-6871-5p 0 1 0
chr21:43760318|43760503 hsa-miR-3180-3p 1 0 0
chr21:43760318|43760503 hsa-miR-6772-5p 1 0 0
chr21:43760318|43760503 hsa-miR-6810-5p 1 0 0
chr21:43760318|43760503 hsa-miR-7855-5p 1 0 0
chr21:43760318|43760503 hsa-miR-30b-3p 0 1 0
chr21:43760318|43760503 hsa-miR-6514-3p 0 1 0
chr21:43760318|43760503 hsa-miR-6877-5p 1 0 0
chr21:43760318|43760503 hsa-miR-7112-5p 0 1 0
chr21:43760318|43760503 hsa-miR-2277-5p 1 0 0
chr21:43760318|43760503 hsa-miR-6847-3p 0 1 0
chr21:43760318|43760503 hsa-miR-1233-5p 1 0 0
chr21:43760318|43760503 hsa-miR-1273h-5p 1 1 0
chr21:43760318|43760503 hsa-miR-4763-3p 1 0 0
chr21:43760318|43760503 hsa-miR-6778-5p 1 0 0
chr21:43760318|43760503 hsa-miR-6816-5p 1 1 0
chr21:43760318|43760503 hsa-miR-6851-5p 1 0 0
chr21:43760318|43760503 hsa-miR-328-5p 1 0 0
chr21:43760318|43760503 hsa-miR-7843-5p 1 0 0
chr21:43760318|43760503 hsa-miR-6876-3p 1 0 0
chr21:43760318|43760503 hsa-miR-6771-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr21:43760318|43760503
ORF Type ORF1
Protein Length 60
Nucleotide Length 180
Protein Sequence MRHHAQLIFVFLVEMGFHHVGQAGLKLLTSSDLPASASQSAGITGMSQCTRRNLGIFIDS
Nucleotide Sequence ATGCGCCACCACGCTCAGCTGATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTCCTGACCTCAAGTGATCTGCCCGCCTCGGCCTCCCAGAGTGCTGGGATTACAGGCATGAGCCAGTGCACCCGGCGGAATCTTGGAATTTTTATAGACAGC

CircID chr21:43760318|43760503
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MSIKIPRFRRVHWLMPVIPALWEAEAGRSLEVRSLRPAWPTW
Nucleotide Sequence CTGTCTATAAAAATTCCAAGATTCCGCCGGGTGCACTGGCTCATGCCTGTAATCCCAGCACTCTGGGAGGCCGAGGCGGGCAGATCACTTGAGGTCAGGAGTTTGAGACCAGCTTGGCCAACATGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites