CircRNA Information

General Information
circRNA Basic Information
CircID chr21:44850643|44850758
Strand -
CircType exon
Host Gene ENSG00000183255.10;
Algorism CIRI2;
Sequence CCCGTCCCCACGATCCCTAAATGGCCACCCCCCAGACAGCCCAACAGGCAGCGAGAGGCCTGCAGGCACTGAGGATGCCAACAGGGCTGGAGAGAGCTGCAGCGTCCTGCCCCGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:44850643|44850758 hsa-miR-148a-5p 0 0 1
chr21:44850643|44850758 hsa-miR-148a-3p 0 0 1
chr21:44850643|44850758 hsa-miR-152-5p 0 0 1
chr21:44850643|44850758 hsa-miR-152-3p 0 0 1
chr21:44850643|44850758 hsa-miR-148b-5p 0 0 1
chr21:44850643|44850758 hsa-miR-148b-3p 0 0 1
chr21:44850643|44850758 hsa-miR-519e-5p 0 0 1
chr21:44850643|44850758 hsa-miR-519e-3p 0 0 1
chr21:44850643|44850758 hsa-miR-608 1 0 1
chr21:44850643|44850758 hsa-miR-626 0 0 1
chr21:44850643|44850758 hsa-miR-637 0 0 1
chr21:44850643|44850758 hsa-miR-638 0 0 1
chr21:44850643|44850758 hsa-miR-639 0 0 1
chr21:44850643|44850758 hsa-miR-1301-5p 0 0 1
chr21:44850643|44850758 hsa-miR-1301-3p 0 0 1
chr21:44850643|44850758 hsa-miR-766-5p 0 0 1
chr21:44850643|44850758 hsa-miR-766-3p 0 0 1
chr21:44850643|44850758 hsa-miR-1231 0 1 1
chr21:44850643|44850758 hsa-miR-1205 0 1 1
chr21:44850643|44850758 hsa-miR-1286 0 0 1
chr21:44850643|44850758 hsa-miR-491-5p 0 0 1
chr21:44850643|44850758 hsa-miR-486-3p 0 0 1
chr21:44850643|44850758 hsa-miR-146b-3p 0 0 1
chr21:44850643|44850758 hsa-miR-1184 0 0 1
chr21:44850643|44850758 hsa-miR-515-3p 0 0 1
chr21:44850643|44850758 hsa-miR-550 0 0 1
chr21:44850643|44850758 hsa-miR-1274b 0 0 1
chr21:44850643|44850758 hsa-miR-720 0 0 1
chr21:44850643|44850758 hsa-miR-612 1 0 0
chr21:44850643|44850758 hsa-miR-762 1 0 0
chr21:44850643|44850758 hsa-miR-1293 1 0 0
chr21:44850643|44850758 hsa-miR-1268a 1 0 0
chr21:44850643|44850758 hsa-miR-3147 1 1 0
chr21:44850643|44850758 hsa-miR-3196 1 0 0
chr21:44850643|44850758 hsa-miR-1268b 1 0 0
chr21:44850643|44850758 hsa-miR-4488 1 0 0
chr21:44850643|44850758 hsa-miR-4498 1 0 0
chr21:44850643|44850758 hsa-miR-4507 1 0 0
chr21:44850643|44850758 hsa-miR-4508 1 0 0
chr21:44850643|44850758 hsa-miR-1587 1 1 0
chr21:44850643|44850758 hsa-miR-4642 0 1 0
chr21:44850643|44850758 hsa-miR-4651 1 0 0
chr21:44850643|44850758 hsa-miR-4656 1 0 0
chr21:44850643|44850758 hsa-miR-4741 1 1 0
chr21:44850643|44850758 hsa-miR-5090 1 1 0
chr21:44850643|44850758 hsa-miR-5787 1 0 0
chr21:44850643|44850758 hsa-miR-6860 1 0 0
chr21:44850643|44850758 hsa-miR-8089 1 0 0
chr21:44850643|44850758 hsa-miR-9899 1 0 0
chr21:44850643|44850758 hsa-miR-12119 1 0 0
chr21:44850643|44850758 hsa-miR-7155-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6861-5p 1 0 0
chr21:44850643|44850758 hsa-miR-4687-3p 1 0 0
chr21:44850643|44850758 hsa-miR-6720-5p 1 1 0
chr21:44850643|44850758 hsa-miR-6727-5p 1 0 0
chr21:44850643|44850758 hsa-miR-3187-3p 1 0 0
chr21:44850643|44850758 hsa-miR-7110-3p 0 1 0
chr21:44850643|44850758 hsa-miR-3180-3p 1 0 0
chr21:44850643|44850758 hsa-miR-185-3p 1 0 0
chr21:44850643|44850758 hsa-miR-6829-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6732-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6782-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6882-3p 0 1 0
chr21:44850643|44850758 hsa-miR-6894-3p 0 1 0
chr21:44850643|44850758 hsa-miR-4640-5p 1 0 0
chr21:44850643|44850758 hsa-miR-92b-5p 1 0 0
chr21:44850643|44850758 hsa-miR-4787-5p 1 0 0
chr21:44850643|44850758 hsa-miR-4781-3p 0 1 0
chr21:44850643|44850758 hsa-miR-7112-5p 1 0 0
chr21:44850643|44850758 hsa-miR-1910-5p 1 0 0
chr21:44850643|44850758 hsa-miR-744-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6895-3p 0 1 0
chr21:44850643|44850758 hsa-miR-4650-5p 0 1 0
chr21:44850643|44850758 hsa-miR-6816-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6775-5p 1 1 0
chr21:44850643|44850758 hsa-miR-5001-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6737-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6743-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6752-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6756-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6803-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6842-5p 1 1 0
chr21:44850643|44850758 hsa-miR-6851-5p 1 0 0
chr21:44850643|44850758 hsa-miR-7110-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6751-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6763-5p 1 0 0
chr21:44850643|44850758 hsa-miR-3620-5p 1 1 0
chr21:44850643|44850758 hsa-miR-1237-5p 1 0 0
chr21:44850643|44850758 hsa-miR-328-5p 1 0 0
chr21:44850643|44850758 hsa-miR-4725-3p 1 0 0
chr21:44850643|44850758 hsa-miR-6846-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6848-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6887-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6885-5p 1 0 0
chr21:44850643|44850758 hsa-miR-3940-5p 1 0 0
chr21:44850643|44850758 hsa-miR-4472 1 0 0
chr21:44850643|44850758 hsa-miR-6718-5p 1 0 0
chr21:44850643|44850758 hsa-miR-6512-3p 0 1 0
chr21:44850643|44850758 hsa-miR-6744-3p 0 1 0
chr21:44850643|44850758 hsa-miR-10394-5p 0 1 0
chr21:44850643|44850758 hsa-miR-6811-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr21:44850643|44850758
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MATPQTAQQAARGLQALRMPTGLERAAASCPV
Nucleotide Sequence ATGGCCACCCCCCAGACAGCCCAACAGGCAGCGAGAGGCCTGCAGGCACTGAGGATGCCAACAGGGCTGGAGAGAGCTGCAGCGTCCTGCCCCGTC
CircID chr21:44850643|44850758
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MQLSPALLASSVPAGLSLPVGLSGGWPFRDRGDG
Nucleotide Sequence CTGCAGCTCTCTCCAGCCCTGTTGGCATCCTCAGTGCCTGCAGGCCTCTCGCTGCCTGTTGGGCTGTCTGGGGGGTGGCCATTTAGGGATCGTGGGGACGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab