CircRNA Information

General Information
circRNA Basic Information
CircID chr21:46190314|46190523
Strand -
CircType exon
Host Gene ENSG00000160285.13;
Algorism CIRI2;
Sequence CTCACAAACAGCATTCCACGCAGGTGGGTTCATGTCCCAGGGGCATGGGGCTCCCTGCTGCACAGACTTGGGATGTTCCATGACAGACCCTGCATATGCAGGCGAGCTCACAACCCAGGGGTATGCGGCTCCATGACACCACCCCATACTCAGGCGAGCTCACGACCCAGGGGCATGAGGCTCCATGACACCACCCCATACGCAGGCAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:46190314|46190523 hsa-miR-107 0 0 1
chr21:46190314|46190523 hsa-miR-214-5p 0 0 1
chr21:46190314|46190523 hsa-miR-214-3p 0 0 1
chr21:46190314|46190523 hsa-miR-206 0 0 1
chr21:46190314|46190523 hsa-miR-448 1 1 1
chr21:46190314|46190523 hsa-miR-496 0 0 1
chr21:46190314|46190523 hsa-miR-608 1 1 1
chr21:46190314|46190523 hsa-miR-613 0 0 1
chr21:46190314|46190523 hsa-miR-758-5p 0 0 1
chr21:46190314|46190523 hsa-miR-758-3p 0 0 1
chr21:46190314|46190523 hsa-miR-1182 0 1 1
chr21:46190314|46190523 hsa-miR-1293 1 1 1
chr21:46190314|46190523 hsa-miR-1225-3p 0 1 1
chr21:46190314|46190523 hsa-miR-1224-3p 0 0 1
chr21:46190314|46190523 hsa-miR-490-5p 0 0 1
chr21:46190314|46190523 hsa-miR-331-3p 0 1 1
chr21:46190314|46190523 hsa-miR-342-5p 0 0 1
chr21:46190314|46190523 hsa-miR-1302 0 1 1
chr21:46190314|46190523 hsa-miR-886-5p 0 0 1
chr21:46190314|46190523 hsa-miR-103 0 0 1
chr21:46190314|46190523 hsa-miR-1 0 0 1
chr21:46190314|46190523 hsa-miR-632 1 0 0
chr21:46190314|46190523 hsa-miR-638 1 0 0
chr21:46190314|46190523 hsa-miR-661 1 1 0
chr21:46190314|46190523 hsa-miR-3193 1 1 0
chr21:46190314|46190523 hsa-miR-4327 1 0 0
chr21:46190314|46190523 hsa-miR-4292 0 1 0
chr21:46190314|46190523 hsa-miR-4440 1 1 0
chr21:46190314|46190523 hsa-miR-4483 0 1 0
chr21:46190314|46190523 hsa-miR-4507 1 1 0
chr21:46190314|46190523 hsa-miR-1587 1 0 0
chr21:46190314|46190523 hsa-miR-4651 1 1 0
chr21:46190314|46190523 hsa-miR-5572 1 0 0
chr21:46190314|46190523 hsa-miR-7974 1 0 0
chr21:46190314|46190523 hsa-miR-6861-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6825-5p 1 0 0
chr21:46190314|46190523 hsa-miR-7114-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6890-5p 0 1 0
chr21:46190314|46190523 hsa-miR-874-5p 0 1 0
chr21:46190314|46190523 hsa-miR-3189-5p 0 1 0
chr21:46190314|46190523 hsa-miR-6742-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6796-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6732-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6827-5p 0 1 0
chr21:46190314|46190523 hsa-miR-6782-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6735-3p 1 0 0
chr21:46190314|46190523 hsa-miR-6772-3p 0 1 0
chr21:46190314|46190523 hsa-miR-4763-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6894-3p 1 0 0
chr21:46190314|46190523 hsa-miR-6742-3p 0 1 0
chr21:46190314|46190523 hsa-miR-6811-3p 1 0 0
chr21:46190314|46190523 hsa-miR-3944-5p 0 1 0
chr21:46190314|46190523 hsa-miR-6872-3p 0 1 0
chr21:46190314|46190523 hsa-miR-2114-3p 0 1 0
chr21:46190314|46190523 hsa-miR-670-5p 1 0 0
chr21:46190314|46190523 hsa-miR-99a-3p 0 1 0
chr21:46190314|46190523 hsa-miR-6812-5p 1 1 0
chr21:46190314|46190523 hsa-miR-6737-5p 1 1 0
chr21:46190314|46190523 hsa-miR-6756-5p 1 0 0
chr21:46190314|46190523 hsa-miR-6819-5p 1 1 0
chr21:46190314|46190523 hsa-miR-6842-5p 1 1 0
chr21:46190314|46190523 hsa-miR-10401-5p 1 0 0
chr21:46190314|46190523 hsa-miR-3620-5p 1 0 0
chr21:46190314|46190523 hsa-miR-4745-5p 1 0 0
chr21:46190314|46190523 hsa-miR-3940-5p 0 1 0
chr21:46190314|46190523 hsa-miR-1271-3p 1 0 0
chr21:46190314|46190523 hsa-miR-6791-5p 1 1 0
chr21:46190314|46190523 hsa-miR-3619-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr21:46190314|46190523
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MLHRLGMFHDRPCICRRAHNPGVCGSMTPPHTQASSRPRGMRLHDTTPYAGK
Nucleotide Sequence CTGCTGCACAGACTTGGGATGTTCCATGACAGACCCTGCATATGCAGGCGAGCTCACAACCCAGGGGTATGCGGCTCCATGACACCACCCCATACTCAGGCGAGCTCACGACCCAGGGGCATGAGGCTCCATGACACCACCCCATACGCAGGCAAG

CircID chr21:46190314|46190523
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MSQGHGAPCCTDLGCSMTDPAYAGELTTQGYAAP
Nucleotide Sequence ATGTCCCAGGGGCATGGGGCTCCCTGCTGCACAGACTTGGGATGTTCCATGACAGACCCTGCATATGCAGGCGAGCTCACAACCCAGGGGTATGCGGCTCCATGA

CircID chr21:46190314|46190523
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MHMQASSQPRGMRLHDTTPYSGELTTQGHEAP
Nucleotide Sequence CTGCATATGCAGGCGAGCTCACAACCCAGGGGTATGCGGCTCCATGACACCACCCCATACTCAGGCGAGCTCACGACCCAGGGGCATGAGGCTCCATGA

CircID chr21:46190314|46190523
ORF Type ORF4
Protein Length 51
Nucleotide Length 153
Protein Sequence MSMGWCHGAAYPWVVSSPAYAGSVMEHPKSVQQGAPCPWDMNPPAWNAVCE
Nucleotide Sequence CTGAGTATGGGGTGGTGTCATGGAGCCGCATACCCCTGGGTTGTGAGCTCGCCTGCATATGCAGGGTCTGTCATGGAACATCCCAAGTCTGTGCAGCAGGGAGCCCCATGCCCCTGGGACATGAACCCACCTGCGTGGAATGCTGTTTGTGAG

CircID chr21:46190314|46190523
ORF Type ORF5
Protein Length 67
Nucleotide Length 204
Protein Sequence MRMGWCHGASCPWVVSSPEYGVVSWSRIPLGCELACICRVCHGTSQVCAAGSPMPLGHEPTCVECCL
Nucleotide Sequence CTGCGTATGGGGTGGTGTCATGGAGCCTCATGCCCCTGGGTCGTGAGCTCGCCTGAGTATGGGGTGGTGTCATGGAGCCGCATACCCCTGGGTTGTGAGCTCGCCTGCATATGCAGGGTCTGTCATGGAACATCCCAAGTCTGTGCAGCAGGGAGCCCCATGCCCCTGGGACATGAACCCACCTGCGTGGAATGCTGTTTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites