CircRNA Information

General Information
circRNA Basic Information
CircID chr21:46220925|46221138
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTCCAAGCCCCGGGCTGTCCACCTCTCCAAGCCCCGGGTTGTCTTACCTCTCCAAGCCCCAACTGTCTACTTCTCCAAGCCCTGGTCTGGCTACCTCTCCAAGCCCTGGCTGTCCACCTATCCAAGCCCCGGCCTGGCTACCTCTCCAAGCCCCAGGCTGTCCACCTCTCCAAGCCCCAACTGTCTACCTCTCCAAGCCCTGGCCTGGCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:46220925|46221138 hsa-let-7b-5p 0 0 1
chr21:46220925|46221138 hsa-let-7b-3p 0 0 1
chr21:46220925|46221138 hsa-let-7c-5p 0 0 1
chr21:46220925|46221138 hsa-let-7c-3p 0 0 1
chr21:46220925|46221138 hsa-let-7d-5p 0 0 1
chr21:46220925|46221138 hsa-let-7d-3p 0 0 1
chr21:46220925|46221138 hsa-let-7e-5p 0 0 1
chr21:46220925|46221138 hsa-let-7e-3p 0 0 1
chr21:46220925|46221138 hsa-miR-98-5p 0 0 1
chr21:46220925|46221138 hsa-miR-98-3p 0 0 1
chr21:46220925|46221138 hsa-let-7g-5p 0 0 1
chr21:46220925|46221138 hsa-let-7g-3p 0 0 1
chr21:46220925|46221138 hsa-let-7i-5p 0 0 1
chr21:46220925|46221138 hsa-let-7i-3p 0 0 1
chr21:46220925|46221138 hsa-miR-185-5p 0 0 1
chr21:46220925|46221138 hsa-miR-185-3p 0 0 1
chr21:46220925|46221138 hsa-miR-379-5p 0 0 1
chr21:46220925|46221138 hsa-miR-379-3p 0 0 1
chr21:46220925|46221138 hsa-miR-432-5p 0 0 1
chr21:46220925|46221138 hsa-miR-432-3p 0 0 1
chr21:46220925|46221138 hsa-miR-575 1 0 1
chr21:46220925|46221138 hsa-miR-620 0 0 1
chr21:46220925|46221138 hsa-miR-641 0 0 1
chr21:46220925|46221138 hsa-miR-661 0 1 1
chr21:46220925|46221138 hsa-miR-411-5p 0 0 1
chr21:46220925|46221138 hsa-miR-411-3p 0 0 1
chr21:46220925|46221138 hsa-miR-1261 0 0 1
chr21:46220925|46221138 hsa-miR-1270 0 0 1
chr21:46220925|46221138 hsa-let-7a 0 0 1
chr21:46220925|46221138 hsa-let-7f 0 0 1
chr21:46220925|46221138 hsa-miR-608 1 0 0
chr21:46220925|46221138 hsa-miR-762 1 0 0
chr21:46220925|46221138 hsa-miR-765 1 0 0
chr21:46220925|46221138 hsa-miR-890 0 1 0
chr21:46220925|46221138 hsa-miR-663b 1 0 0
chr21:46220925|46221138 hsa-miR-1253 1 0 0
chr21:46220925|46221138 hsa-miR-1268a 1 0 0
chr21:46220925|46221138 hsa-miR-2861 1 0 0
chr21:46220925|46221138 hsa-miR-3125 1 0 0
chr21:46220925|46221138 hsa-miR-3132 1 0 0
chr21:46220925|46221138 hsa-miR-3138 1 1 0
chr21:46220925|46221138 hsa-miR-3147 1 0 0
chr21:46220925|46221138 hsa-miR-3154 1 0 0
chr21:46220925|46221138 hsa-miR-3170 1 0 0
chr21:46220925|46221138 hsa-miR-4306 1 0 0
chr21:46220925|46221138 hsa-miR-4259 1 1 0
chr21:46220925|46221138 hsa-miR-4260 1 1 0
chr21:46220925|46221138 hsa-miR-4271 1 0 0
chr21:46220925|46221138 hsa-miR-3916 1 0 0
chr21:46220925|46221138 hsa-miR-3918 1 0 0
chr21:46220925|46221138 hsa-miR-1268b 1 0 0
chr21:46220925|46221138 hsa-miR-378g 1 0 0
chr21:46220925|46221138 hsa-miR-4449 1 0 0
chr21:46220925|46221138 hsa-miR-4450 0 1 0
chr21:46220925|46221138 hsa-miR-3689c 1 0 0
chr21:46220925|46221138 hsa-miR-4505 1 0 0
chr21:46220925|46221138 hsa-miR-2392 1 0 0
chr21:46220925|46221138 hsa-miR-4508 0 1 0
chr21:46220925|46221138 hsa-miR-4516 1 0 0
chr21:46220925|46221138 hsa-miR-4538 1 1 0
chr21:46220925|46221138 hsa-miR-3978 1 0 0
chr21:46220925|46221138 hsa-miR-4644 1 0 0
chr21:46220925|46221138 hsa-miR-4651 1 0 0
chr21:46220925|46221138 hsa-miR-4688 1 0 0
chr21:46220925|46221138 hsa-miR-4692 1 0 0
chr21:46220925|46221138 hsa-miR-4710 1 0 0
chr21:46220925|46221138 hsa-miR-4748 1 0 0
chr21:46220925|46221138 hsa-miR-5090 1 0 0
chr21:46220925|46221138 hsa-miR-5192 1 0 0
chr21:46220925|46221138 hsa-miR-5194 1 0 0
chr21:46220925|46221138 hsa-miR-5572 1 0 0
chr21:46220925|46221138 hsa-miR-5703 1 0 0
chr21:46220925|46221138 hsa-miR-5787 1 0 0
chr21:46220925|46221138 hsa-miR-6081 1 0 0
chr21:46220925|46221138 hsa-miR-6085 0 1 0
chr21:46220925|46221138 hsa-miR-6132 1 0 0
chr21:46220925|46221138 hsa-miR-6134 0 1 0
chr21:46220925|46221138 hsa-miR-6745 1 0 0
chr21:46220925|46221138 hsa-miR-6860 1 0 0
chr21:46220925|46221138 hsa-miR-8056 1 0 0
chr21:46220925|46221138 hsa-miR-8089 1 0 0
chr21:46220925|46221138 hsa-miR-12114 1 1 0
chr21:46220925|46221138 hsa-miR-12127 1 0 0
chr21:46220925|46221138 hsa-miR-12128 1 0 0
chr21:46220925|46221138 hsa-miR-12131 1 1 0
chr21:46220925|46221138 hsa-miR-6747-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6861-5p 1 0 0
chr21:46220925|46221138 hsa-miR-7106-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6825-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6857-5p 1 0 0
chr21:46220925|46221138 hsa-miR-1972 1 1 0
chr21:46220925|46221138 hsa-miR-4687-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6799-5p 1 1 0
chr21:46220925|46221138 hsa-miR-8071 1 1 0
chr21:46220925|46221138 hsa-miR-1227-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6515-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6089 1 0 0
chr21:46220925|46221138 hsa-miR-6880-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4695-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6730-5p 1 0 0
chr21:46220925|46221138 hsa-miR-7154-3p 1 0 0
chr21:46220925|46221138 hsa-miR-4755-3p 0 1 0
chr21:46220925|46221138 hsa-miR-6727-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6806-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6721-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4655-5p 1 1 0
chr21:46220925|46221138 hsa-miR-197-5p 1 0 0
chr21:46220925|46221138 hsa-miR-3180-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6796-5p 0 1 0
chr21:46220925|46221138 hsa-miR-6782-5p 1 1 0
chr21:46220925|46221138 hsa-miR-3194-5p 1 0 0
chr21:46220925|46221138 hsa-miR-30b-3p 1 0 0
chr21:46220925|46221138 hsa-miR-5006-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6786-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6852-5p 0 1 0
chr21:46220925|46221138 hsa-miR-5088-5p 1 0 0
chr21:46220925|46221138 hsa-miR-2277-3p 1 0 0
chr21:46220925|46221138 hsa-miR-1229-5p 1 0 0
chr21:46220925|46221138 hsa-miR-193b-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6784-5p 1 1 0
chr21:46220925|46221138 hsa-miR-4640-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6753-5p 1 1 0
chr21:46220925|46221138 hsa-miR-3127-5p 1 1 0
chr21:46220925|46221138 hsa-miR-296-3p 1 0 0
chr21:46220925|46221138 hsa-miR-4650-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6771-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6823-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6749-5p 1 0 0
chr21:46220925|46221138 hsa-miR-7854-3p 1 0 0
chr21:46220925|46221138 hsa-miR-4743-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4446-3p 1 0 0
chr21:46220925|46221138 hsa-miR-149-3p 1 0 0
chr21:46220925|46221138 hsa-miR-202-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6824-5p 1 0 0
chr21:46220925|46221138 hsa-miR-3162-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6800-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6802-5p 1 1 0
chr21:46220925|46221138 hsa-miR-7156-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6781-5p 1 0 0
chr21:46220925|46221138 hsa-miR-3191-3p 1 0 0
chr21:46220925|46221138 hsa-let-7a-5p 1 1 0
chr21:46220925|46221138 hsa-miR-744-5p 1 0 0
chr21:46220925|46221138 hsa-miR-7113-5p 1 0 0
chr21:46220925|46221138 hsa-miR-3675-5p 1 1 0
chr21:46220925|46221138 hsa-miR-4645-3p 1 0 0
chr21:46220925|46221138 hsa-miR-3689b-3p 1 0 0
chr21:46220925|46221138 hsa-miR-4763-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6787-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6865-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6870-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6893-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6775-5p 1 0 0
chr21:46220925|46221138 hsa-miR-5001-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6737-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6743-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6752-5p 0 1 0
chr21:46220925|46221138 hsa-miR-6756-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6815-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6819-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6851-5p 1 1 0
chr21:46220925|46221138 hsa-miR-7107-5p 1 0 0
chr21:46220925|46221138 hsa-miR-11181-3p 1 0 0
chr21:46220925|46221138 hsa-miR-1249-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6722-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6763-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6774-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6779-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6780a-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6879-5p 1 0 0
chr21:46220925|46221138 hsa-miR-7111-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4728-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6780b-5p 1 0 0
chr21:46220925|46221138 hsa-miR-10396a-5p 1 1 0
chr21:46220925|46221138 hsa-miR-10396b-5p 1 0 0
chr21:46220925|46221138 hsa-miR-328-5p 1 0 0
chr21:46220925|46221138 hsa-miR-3689a-3p 1 0 0
chr21:46220925|46221138 hsa-miR-449c-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4632-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4649-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4685-5p 1 1 0
chr21:46220925|46221138 hsa-miR-4725-3p 1 0 0
chr21:46220925|46221138 hsa-miR-4726-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6729-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6738-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6794-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6795-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6846-5p 0 1 0
chr21:46220925|46221138 hsa-miR-6848-5p 0 1 0
chr21:46220925|46221138 hsa-miR-6858-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6887-5p 1 0 0
chr21:46220925|46221138 hsa-miR-3187-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4436b-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6831-5p 1 1 0
chr21:46220925|46221138 hsa-miR-939-5p 1 0 0
chr21:46220925|46221138 hsa-miR-1266-5p 1 0 0
chr21:46220925|46221138 hsa-miR-4633-3p 1 0 0
chr21:46220925|46221138 hsa-miR-1914-3p 1 0 0
chr21:46220925|46221138 hsa-miR-6855-5p 1 1 0
chr21:46220925|46221138 hsa-miR-4747-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6849-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6791-5p 1 0 0
chr21:46220925|46221138 hsa-miR-3529-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6718-5p 1 0 0
chr21:46220925|46221138 hsa-miR-6837-5p 1 1 0
chr21:46220925|46221138 hsa-miR-6764-5p 0 1 0
chr21:46220925|46221138 hsa-miR-3927-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr21:46220925|46221138
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MSTYPSPGLATSPSPRLSTSPSPNCLPLQALAWL
Nucleotide Sequence CTGTCCACCTATCCAAGCCCCGGCCTGGCTACCTCTCCAAGCCCCAGGCTGTCCACCTCTCCAAGCCCCAACTGTCTACCTCTCCAAGCCCTGGCCTGGCTA
CircID chr21:46220925|46221138
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MSTSPSPGLSYLSKPQLSTSPSPGLATSPSPGCPPIQAPAWLPLQAPGCPPLQAPTVYLSKPWPGY
Nucleotide Sequence CTGTCCACCTCTCCAAGCCCCGGGTTGTCTTACCTCTCCAAGCCCCAACTGTCTACTTCTCCAAGCCCTGGTCTGGCTACCTCTCCAAGCCCTGGCTGTCCACCTATCCAAGCCCCGGCCTGGCTACCTCTCCAAGCCCCAGGCTGTCCACCTCTCCAAGCCCCAACTGTCTACCTCTCCAAGCCCTGGCCTGGCTAC
CircID chr21:46220925|46221138
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MVWLPLQALAVHLSKPRPGYLSKPQAVHLSKPQLSTSPSPGLA
Nucleotide Sequence CTGGTCTGGCTACCTCTCCAAGCCCTGGCTGTCCACCTATCCAAGCCCCGGCCTGGCTACCTCTCCAAGCCCCAGGCTGTCCACCTCTCCAAGCCCCAACTGTCTACCTCTCCAAGCCCTGGCCTGGCT
CircID chr21:46220925|46221138
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MDRWTARAWRGSQTRAWRSRQLGLGEVRQPGAWRGGQPGAWR
Nucleotide Sequence TTGGATAGGTGGACAGCCAGGGCTTGGAGAGGTAGCCAGACCAGGGCTTGGAGAAGTAGACAGTTGGGGCTTGGAGAGGTAAGACAACCCGGGGCTTGGAGAGGTGGACAGCCCGGGGCTTGGAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab