CircRNA Information

General Information
circRNA Basic Information
CircID chr21:46346839|46346970
Strand +
CircType exon
Host Gene ENSG00000160299.15;
Algorism CIRI2;
Sequence CTCCTCCTTCTCCCGTGCGTGCTGCTCCCTGAGGAGCTCCAGCTCGTGCTGCTGCCTGCTCTGTAGCAGGGCCAGCTCCTGGGCACGCCGGCTGTTGAGCATCTCCCGCAGCTCCGTCAATGCCGTCTCCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr21:46346839|46346970 hsa-miR-15a-5p 0 0 1
chr21:46346839|46346970 hsa-miR-15a-3p 0 0 1
chr21:46346839|46346970 hsa-miR-221-5p 0 0 1
chr21:46346839|46346970 hsa-miR-221-3p 0 0 1
chr21:46346839|46346970 hsa-miR-222-5p 0 0 1
chr21:46346839|46346970 hsa-miR-222-3p 0 0 1
chr21:46346839|46346970 hsa-miR-15b-5p 0 0 1
chr21:46346839|46346970 hsa-miR-15b-3p 0 0 1
chr21:46346839|46346970 hsa-miR-195-5p 0 0 1
chr21:46346839|46346970 hsa-miR-195-3p 0 0 1
chr21:46346839|46346970 hsa-miR-328-5p 0 0 1
chr21:46346839|46346970 hsa-miR-328-3p 0 0 1
chr21:46346839|46346970 hsa-miR-424-5p 0 0 1
chr21:46346839|46346970 hsa-miR-424-3p 0 0 1
chr21:46346839|46346970 hsa-miR-497-5p 0 0 1
chr21:46346839|46346970 hsa-miR-497-3p 0 0 1
chr21:46346839|46346970 hsa-miR-558 0 0 1
chr21:46346839|46346970 hsa-miR-421 0 0 1
chr21:46346839|46346970 hsa-miR-765 0 0 1
chr21:46346839|46346970 hsa-miR-708-5p 0 0 1
chr21:46346839|46346970 hsa-miR-708-3p 0 0 1
chr21:46346839|46346970 hsa-miR-665 0 1 1
chr21:46346839|46346970 hsa-miR-1291 0 1 1
chr21:46346839|46346970 hsa-miR-1256 1 0 1
chr21:46346839|46346970 hsa-miR-1266-5p 0 0 1
chr21:46346839|46346970 hsa-miR-1266-3p 0 0 1
chr21:46346839|46346970 hsa-miR-28-5p 0 0 1
chr21:46346839|46346970 hsa-miR-16 0 0 1
chr21:46346839|46346970 hsa-miR-762 1 0 0
chr21:46346839|46346970 hsa-miR-920 1 0 0
chr21:46346839|46346970 hsa-miR-3937 1 0 0
chr21:46346839|46346970 hsa-miR-4428 0 1 0
chr21:46346839|46346970 hsa-miR-3135b 0 1 0
chr21:46346839|46346970 hsa-miR-4467 1 0 0
chr21:46346839|46346970 hsa-miR-4508 1 0 0
chr21:46346839|46346970 hsa-miR-4510 0 1 0
chr21:46346839|46346970 hsa-miR-4518 0 1 0
chr21:46346839|46346970 hsa-miR-3960 1 0 0
chr21:46346839|46346970 hsa-miR-4673 0 1 0
chr21:46346839|46346970 hsa-miR-4734 0 1 0
chr21:46346839|46346970 hsa-miR-4739 1 0 0
chr21:46346839|46346970 hsa-miR-4785 1 0 0
chr21:46346839|46346970 hsa-miR-5091 1 0 0
chr21:46346839|46346970 hsa-miR-6081 0 1 0
chr21:46346839|46346970 hsa-miR-6085 1 0 0
chr21:46346839|46346970 hsa-miR-7704 1 0 0
chr21:46346839|46346970 hsa-miR-8082 1 1 0
chr21:46346839|46346970 hsa-miR-12128 1 1 0
chr21:46346839|46346970 hsa-miR-6840-3p 0 1 0
chr21:46346839|46346970 hsa-miR-6765-5p 1 0 0
chr21:46346839|46346970 hsa-miR-139-3p 1 1 0
chr21:46346839|46346970 hsa-miR-4695-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6746-5p 1 1 0
chr21:46346839|46346970 hsa-miR-1292-5p 1 0 0
chr21:46346839|46346970 hsa-miR-185-3p 0 1 0
chr21:46346839|46346970 hsa-miR-6805-5p 1 1 0
chr21:46346839|46346970 hsa-miR-6770-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6874-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6888-5p 0 1 0
chr21:46346839|46346970 hsa-miR-4690-5p 0 1 0
chr21:46346839|46346970 hsa-miR-92b-5p 1 0 0
chr21:46346839|46346970 hsa-miR-4787-5p 1 0 0
chr21:46346839|46346970 hsa-miR-4446-3p 1 0 0
chr21:46346839|46346970 hsa-miR-3162-5p 1 0 0
chr21:46346839|46346970 hsa-miR-3191-3p 1 0 0
chr21:46346839|46346970 hsa-miR-483-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6501-3p 0 1 0
chr21:46346839|46346970 hsa-miR-16-5p 0 1 0
chr21:46346839|46346970 hsa-miR-10400-5p 1 0 0
chr21:46346839|46346970 hsa-miR-1343-5p 1 0 0
chr21:46346839|46346970 hsa-miR-5001-5p 1 1 0
chr21:46346839|46346970 hsa-miR-6726-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6813-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6780b-5p 1 0 0
chr21:46346839|46346970 hsa-miR-4725-3p 1 0 0
chr21:46346839|46346970 hsa-miR-6848-5p 1 0 0
chr21:46346839|46346970 hsa-miR-939-5p 1 0 0
chr21:46346839|46346970 hsa-miR-34b-5p 0 1 0
chr21:46346839|46346970 hsa-miR-6511b-5p 0 1 0
chr21:46346839|46346970 hsa-miR-6785-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6791-5p 1 0 0
chr21:46346839|46346970 hsa-miR-3619-5p 1 0 0
chr21:46346839|46346970 hsa-miR-6838-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr21:46346839|46346970
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MRSSSSCCCLLCSRASSWARRLLSISRSSVNAVS
Nucleotide Sequence CTGAGGAGCTCCAGCTCGTGCTGCTGCCTGCTCTGTAGCAGGGCCAGCTCCTGGGCACGCCGGCTGTTGAGCATCTCCCGCAGCTCCGTCAATGCCGTCTCC
CircID chr21:46346839|46346970
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MTELREMLNSRRAQELALLQSRQQHELELLREQHAREKEE
Nucleotide Sequence TTGACGGAGCTGCGGGAGATGCTCAACAGCCGGCGTGCCCAGGAGCTGGCCCTGCTACAGAGCAGGCAGCAGCACGAGCTGGAGCTCCTCAGGGAGCAGCACGCACGGGAGAAGGAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab