CircRNA Information

General Information
circRNA Basic Information
CircID chr22:17137677|17137835
Strand -
CircType exon
Host Gene ENSG00000069998.11;
Algorism CIRI2;
Sequence ATCCACAGTATTCCACACTGCCTCCCCCATTTCAGAAGTCCCTACTGAAATGAGAAGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:17137677|17137835 hsa-miR-34a-5p 0 0 1
chr22:17137677|17137835 hsa-miR-34a-3p 0 0 1
chr22:17137677|17137835 hsa-miR-200b-5p 0 0 1
chr22:17137677|17137835 hsa-miR-200b-3p 0 0 1
chr22:17137677|17137835 hsa-miR-200c-5p 0 0 1
chr22:17137677|17137835 hsa-miR-200c-3p 0 0 1
chr22:17137677|17137835 hsa-miR-429 0 0 1
chr22:17137677|17137835 hsa-miR-449a 0 0 1
chr22:17137677|17137835 hsa-miR-612 0 0 1
chr22:17137677|17137835 hsa-miR-625-5p 0 0 1
chr22:17137677|17137835 hsa-miR-625-3p 0 0 1
chr22:17137677|17137835 hsa-miR-650 0 0 1
chr22:17137677|17137835 hsa-miR-662 0 0 1
chr22:17137677|17137835 hsa-miR-449b-5p 0 0 1
chr22:17137677|17137835 hsa-miR-449b-3p 0 0 1
chr22:17137677|17137835 hsa-miR-892a 0 0 1
chr22:17137677|17137835 hsa-miR-936 0 0 1
chr22:17137677|17137835 hsa-miR-297 0 0 1
chr22:17137677|17137835 hsa-miR-1236-5p 0 0 1
chr22:17137677|17137835 hsa-miR-1236-3p 0 0 1
chr22:17137677|17137835 hsa-miR-1237-5p 0 0 1
chr22:17137677|17137835 hsa-miR-1237-3p 0 0 1
chr22:17137677|17137835 hsa-miR-1204 0 0 1
chr22:17137677|17137835 hsa-miR-1248 0 0 1
chr22:17137677|17137835 hsa-miR-1275 0 0 1
chr22:17137677|17137835 hsa-miR-1827 0 0 1
chr22:17137677|17137835 hsa-miR-296-5p 0 0 1
chr22:17137677|17137835 hsa-miR-331-3p 0 0 1
chr22:17137677|17137835 hsa-miR-188-3p 0 0 1
chr22:17137677|17137835 hsa-miR-199b-3p 0 0 1
chr22:17137677|17137835 hsa-miR-199a-3p 0 0 1
chr22:17137677|17137835 hsa-miR-34c-5p 0 1 1
chr22:17137677|17137835 hsa-miR-1260 0 0 1
chr22:17137677|17137835 hsa-miR-550 0 0 1
chr22:17137677|17137835 hsa-miR-1285 0 0 1
chr22:17137677|17137835 hsa-miR-203 0 0 1
chr22:17137677|17137835 hsa-miR-3911 0 1 0
chr22:17137677|17137835 hsa-miR-4458 0 1 0
chr22:17137677|17137835 hsa-miR-4669 1 0 0
chr22:17137677|17137835 hsa-miR-5698 1 1 0
chr22:17137677|17137835 hsa-miR-187-3p 0 1 0
chr22:17137677|17137835 hsa-miR-15a-3p 1 1 0
chr22:17137677|17137835 hsa-miR-6825-5p 1 1 0
chr22:17137677|17137835 hsa-miR-4695-5p 1 0 0
chr22:17137677|17137835 hsa-miR-6845-3p 1 0 0
chr22:17137677|17137835 hsa-miR-1229-5p 1 0 0
chr22:17137677|17137835 hsa-miR-5004-3p 1 1 0
chr22:17137677|17137835 hsa-miR-3191-5p 1 0 0
chr22:17137677|17137835 hsa-miR-146b-3p 1 1 0
chr22:17137677|17137835 hsa-miR-6886-3p 1 0 0
chr22:17137677|17137835 hsa-miR-4649-3p 1 0 0
chr22:17137677|17137835 hsa-miR-130b-5p 1 1 0
chr22:17137677|17137835 hsa-miR-6767-3p 0 1 0
chr22:17137677|17137835 hsa-miR-7111-5p 0 1 0
chr22:17137677|17137835 hsa-miR-328-5p 1 0 0
chr22:17137677|17137835 hsa-miR-449c-5p 0 1 0
chr22:17137677|17137835 hsa-miR-6883-5p 1 0 0
chr22:17137677|17137835 hsa-miR-4723-5p 0 1 0
chr22:17137677|17137835 hsa-miR-34b-5p 0 1 0
chr22:17137677|17137835 hsa-miR-365a-5p 1 1 0
chr22:17137677|17137835 hsa-miR-6773-5p 0 1 0
chr22:17137677|17137835 hsa-miR-4665-5p 0 1 0
chr22:17137677|17137835 hsa-miR-6877-3p 1 0 0
chr22:17137677|17137835 hsa-miR-6724-5p 0 1 0
chr22:17137677|17137835 hsa-miR-3059-5p 0 1 0
chr22:17137677|17137835 hsa-miR-3150b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:17137677|17137835
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MRRTLRHTGEENGLRLDCHERHVGTGPRKFQPFHTK
Nucleotide Sequence ATGAGAAGGACACTGAGGCACACAGGGGAAGAGAATGGCCTGAGGTTAGACTGCCACGAAAGGCACGTGGGAACTGGGCCCAGAAAATTCCAACCGTTCCATACAAAA

CircID chr22:17137677|17137835
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MGPVPTCLSWQSNLRPFSSPVCLSVLLISVGTSEMGEAVWNTVD
Nucleotide Sequence CTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCTTCTCATTTCAGTAGGGACTTCTGAAATGGGGGAGGCAGTGTGGAATACTGTGGAT

CircID chr22:17137677|17137835
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MYGTVGIFWAQFPRAFRGSLTSGHSLPLCASVSFSFQ
Nucleotide Sequence TTGTATGGAACGGTTGGAATTTTCTGGGCCCAGTTCCCACGTGCCTTTCGTGGCAGTCTAACCTCAGGCCATTCTCTTCCCCTGTGTGCCTCAGTGTCCTTCTCATTTCAGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites