CircRNA Information

General Information
circRNA Basic Information
CircID chr22:18099069|18099194
Strand +
CircType exon
Host Gene ENSG00000215193.11;
Algorism CIRI2;
Sequence TCTTGCCTGTCCTTCAGAGTAGATTCACACCTTCTGGCCCACCAATCTCCAGACTTTGTCTTCAGACATACAGAACATTCCCTCACAAACTCTACTACTTTTCCACTCACCAGCCCCTACCTTCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:18099069|18099194 hsa-miR-31-5p 0 0 1
chr22:18099069|18099194 hsa-miR-31-3p 0 0 1
chr22:18099069|18099194 hsa-miR-206 1 0 1
chr22:18099069|18099194 hsa-miR-567 0 0 1
chr22:18099069|18099194 hsa-miR-613 0 0 1
chr22:18099069|18099194 hsa-miR-620 0 0 1
chr22:18099069|18099194 hsa-miR-411-5p 0 0 1
chr22:18099069|18099194 hsa-miR-411-3p 0 0 1
chr22:18099069|18099194 hsa-miR-758-5p 0 0 1
chr22:18099069|18099194 hsa-miR-758-3p 0 0 1
chr22:18099069|18099194 hsa-miR-541-5p 0 0 1
chr22:18099069|18099194 hsa-miR-541-3p 0 0 1
chr22:18099069|18099194 hsa-miR-297 0 0 1
chr22:18099069|18099194 hsa-miR-1294 0 0 1
chr22:18099069|18099194 hsa-miR-1257 0 0 1
chr22:18099069|18099194 hsa-miR-548n 0 0 1
chr22:18099069|18099194 hsa-miR-1270 0 0 1
chr22:18099069|18099194 hsa-miR-1252-5p 0 0 1
chr22:18099069|18099194 hsa-miR-1252-3p 0 0 1
chr22:18099069|18099194 hsa-miR-654-5p 1 1 1
chr22:18099069|18099194 hsa-miR-509-3p 0 1 1
chr22:18099069|18099194 hsa-miR-654-3p 0 0 1
chr22:18099069|18099194 hsa-miR-138 0 0 1
chr22:18099069|18099194 hsa-miR-1 0 0 1
chr22:18099069|18099194 hsa-miR-516b 0 0 1
chr22:18099069|18099194 hsa-miR-608 1 0 0
chr22:18099069|18099194 hsa-miR-637 1 0 0
chr22:18099069|18099194 hsa-miR-762 1 0 0
chr22:18099069|18099194 hsa-miR-920 1 0 0
chr22:18099069|18099194 hsa-miR-2861 1 0 0
chr22:18099069|18099194 hsa-miR-3153 1 0 0
chr22:18099069|18099194 hsa-miR-1193 1 0 0
chr22:18099069|18099194 hsa-miR-4299 1 0 0
chr22:18099069|18099194 hsa-miR-4322 1 0 0
chr22:18099069|18099194 hsa-miR-3652 1 0 0
chr22:18099069|18099194 hsa-miR-3911 1 0 0
chr22:18099069|18099194 hsa-miR-4430 1 0 0
chr22:18099069|18099194 hsa-miR-4447 1 0 0
chr22:18099069|18099194 hsa-miR-4450 1 0 0
chr22:18099069|18099194 hsa-miR-4451 1 0 0
chr22:18099069|18099194 hsa-miR-4458 1 0 0
chr22:18099069|18099194 hsa-miR-4466 1 0 0
chr22:18099069|18099194 hsa-miR-4476 0 1 0
chr22:18099069|18099194 hsa-miR-4481 1 0 0
chr22:18099069|18099194 hsa-miR-4488 1 0 0
chr22:18099069|18099194 hsa-miR-4489 1 0 0
chr22:18099069|18099194 hsa-miR-4492 1 0 0
chr22:18099069|18099194 hsa-miR-4498 1 1 0
chr22:18099069|18099194 hsa-miR-4505 1 0 0
chr22:18099069|18099194 hsa-miR-4507 1 0 0
chr22:18099069|18099194 hsa-miR-4508 1 0 0
chr22:18099069|18099194 hsa-miR-4510 1 0 0
chr22:18099069|18099194 hsa-miR-4533 1 0 0
chr22:18099069|18099194 hsa-miR-1587 1 0 0
chr22:18099069|18099194 hsa-miR-4651 1 0 0
chr22:18099069|18099194 hsa-miR-4656 1 0 0
chr22:18099069|18099194 hsa-miR-4675 1 0 0
chr22:18099069|18099194 hsa-miR-4688 1 0 0
chr22:18099069|18099194 hsa-miR-4710 1 0 0
chr22:18099069|18099194 hsa-miR-4741 1 0 0
chr22:18099069|18099194 hsa-miR-5186 0 1 0
chr22:18099069|18099194 hsa-miR-5192 1 0 0
chr22:18099069|18099194 hsa-miR-5194 1 0 0
chr22:18099069|18099194 hsa-miR-5787 1 0 0
chr22:18099069|18099194 hsa-miR-6085 1 1 0
chr22:18099069|18099194 hsa-miR-6086 1 0 0
chr22:18099069|18099194 hsa-miR-6124 1 0 0
chr22:18099069|18099194 hsa-miR-6127 1 0 0
chr22:18099069|18099194 hsa-miR-6130 1 0 0
chr22:18099069|18099194 hsa-miR-6131 1 0 0
chr22:18099069|18099194 hsa-miR-6133 1 0 0
chr22:18099069|18099194 hsa-miR-8089 1 0 0
chr22:18099069|18099194 hsa-miR-12114 1 0 0
chr22:18099069|18099194 hsa-miR-12119 0 1 0
chr22:18099069|18099194 hsa-miR-138-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6734-5p 1 0 0
chr22:18099069|18099194 hsa-miR-4731-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6894-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6857-5p 1 0 0
chr22:18099069|18099194 hsa-miR-4687-3p 1 0 0
chr22:18099069|18099194 hsa-miR-6799-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6730-5p 1 1 0
chr22:18099069|18099194 hsa-miR-6741-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6721-5p 1 0 0
chr22:18099069|18099194 hsa-miR-197-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6716-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6748-5p 1 1 0
chr22:18099069|18099194 hsa-miR-6796-5p 1 0 0
chr22:18099069|18099194 hsa-miR-185-3p 1 0 0
chr22:18099069|18099194 hsa-miR-6829-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6732-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6782-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6786-5p 1 0 0
chr22:18099069|18099194 hsa-miR-1226-5p 1 0 0
chr22:18099069|18099194 hsa-miR-1229-5p 1 0 0
chr22:18099069|18099194 hsa-miR-296-3p 1 0 0
chr22:18099069|18099194 hsa-let-7d-5p 1 0 0
chr22:18099069|18099194 hsa-let-7b-5p 1 1 0
chr22:18099069|18099194 hsa-miR-6834-5p 1 1 0
chr22:18099069|18099194 hsa-miR-4446-3p 1 0 0
chr22:18099069|18099194 hsa-miR-149-3p 1 0 0
chr22:18099069|18099194 hsa-miR-6824-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6789-5p 1 0 0
chr22:18099069|18099194 hsa-miR-3162-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6802-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6877-5p 1 0 0
chr22:18099069|18099194 hsa-miR-5010-5p 1 0 0
chr22:18099069|18099194 hsa-miR-574-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6866-5p 1 0 0
chr22:18099069|18099194 hsa-let-7c-5p 1 0 0
chr22:18099069|18099194 hsa-let-7e-5p 1 0 0
chr22:18099069|18099194 hsa-let-7a-5p 1 0 0
chr22:18099069|18099194 hsa-miR-625-5p 1 1 0
chr22:18099069|18099194 hsa-miR-4283 1 0 0
chr22:18099069|18099194 hsa-miR-4763-3p 1 0 0
chr22:18099069|18099194 hsa-miR-6769b-5p 1 1 0
chr22:18099069|18099194 hsa-miR-6787-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6816-5p 1 0 0
chr22:18099069|18099194 hsa-miR-5001-5p 1 1 0
chr22:18099069|18099194 hsa-miR-6743-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6756-5p 0 1 0
chr22:18099069|18099194 hsa-miR-6769a-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6813-5p 1 1 0
chr22:18099069|18099194 hsa-miR-6842-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6851-5p 1 0 0
chr22:18099069|18099194 hsa-miR-10401-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6763-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6780a-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6797-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6808-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6879-5p 1 0 0
chr22:18099069|18099194 hsa-miR-3620-5p 1 0 0
chr22:18099069|18099194 hsa-miR-5196-5p 1 0 0
chr22:18099069|18099194 hsa-miR-1237-5p 1 0 0
chr22:18099069|18099194 hsa-miR-1909-3p 1 0 0
chr22:18099069|18099194 hsa-miR-4726-5p 0 1 0
chr22:18099069|18099194 hsa-miR-6846-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6848-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6831-5p 1 0 0
chr22:18099069|18099194 hsa-miR-4758-5p 1 1 0
chr22:18099069|18099194 hsa-miR-3940-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6736-5p 1 0 0
chr22:18099069|18099194 hsa-miR-4700-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6891-5p 1 0 0
chr22:18099069|18099194 hsa-miR-4472 1 0 0
chr22:18099069|18099194 hsa-miR-4667-5p 1 0 0
chr22:18099069|18099194 hsa-miR-3689d 0 1 0
chr22:18099069|18099194 hsa-miR-6790-5p 1 0 0
chr22:18099069|18099194 hsa-miR-6849-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:18099069|18099194
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MSFRVDSHLLAHQSPDFVFRHTEHSLTNSTTFPLTSPYLP
Nucleotide Sequence CTGTCCTTCAGAGTAGATTCACACCTTCTGGCCCACCAATCTCCAGACTTTGTCTTCAGACATACAGAACATTCCCTCACAAACTCTACTACTTTTCCACTCACCAGCCCCTACCTTCCT
CircID chr22:18099069|18099194
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence LPVLQSRFTPSGPPISRLCLQTYRTFPHKLYYFSTHQPLPS
Nucleotide Sequence TTGCCTGTCCTTCAGAGTAGATTCACACCTTCTGGCCCACCAATCTCCAGACTTTGTCTTCAGACATACAGAACATTCCCTCACAAACTCTACTACTTTTCCACTCACCAGCCCCTACCTTCC
CircID chr22:18099069|18099194
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MVSGKVVEFVRECSVCLKTKSGDWWARRCESTLKDRQ
Nucleotide Sequence CTGGTGAGTGGAAAAGTAGTAGAGTTTGTGAGGGAATGTTCTGTATGTCTGAAGACAAAGTCTGGAGATTGGTGGGCCAGAAGGTGTGAATCTACTCTGAAGGACAGGCAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab