CircRNA Information

General Information
circRNA Basic Information
CircID chr22:19037062|19037220
Strand -
CircType exon
Host Gene ENSG00000070413.17;
Algorism CIRI2;
Sequence CTGGCTGCCCTGCCCCAGTGCATGTGGGATCCACGGCATGCTTCCTGCTTCGTCCTCTGCAGCCAGTAGGGGACTCCTGTGGCCAGGACTTCCTTGTTAAGTAGCAGCCCTTCTCCAAGGGGAGCACAAGCCTGCCCGCACACAGCCTCCAGCATCATG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:19037062|19037220 hsa-miR-432-5p 0 0 1
chr22:19037062|19037220 hsa-miR-432-3p 0 0 1
chr22:19037062|19037220 hsa-miR-193b-5p 0 0 1
chr22:19037062|19037220 hsa-miR-193b-3p 0 0 1
chr22:19037062|19037220 hsa-miR-588 0 1 1
chr22:19037062|19037220 hsa-miR-604 0 0 1
chr22:19037062|19037220 hsa-miR-620 0 0 1
chr22:19037062|19037220 hsa-miR-647 0 0 1
chr22:19037062|19037220 hsa-miR-650 1 0 1
chr22:19037062|19037220 hsa-miR-892b 0 0 1
chr22:19037062|19037220 hsa-miR-147b-5p 0 0 1
chr22:19037062|19037220 hsa-miR-147b-3p 0 0 1
chr22:19037062|19037220 hsa-miR-1287-5p 0 0 1
chr22:19037062|19037220 hsa-miR-1287-3p 0 0 1
chr22:19037062|19037220 hsa-miR-1270 0 0 1
chr22:19037062|19037220 hsa-miR-1322 0 1 1
chr22:19037062|19037220 hsa-miR-486-3p 0 1 1
chr22:19037062|19037220 hsa-miR-485-5p 0 0 1
chr22:19037062|19037220 hsa-miR-1289 0 1 1
chr22:19037062|19037220 hsa-miR-188-3p 0 1 1
chr22:19037062|19037220 hsa-miR-1207-5p 0 1 1
chr22:19037062|19037220 hsa-miR-193a-3p 0 0 1
chr22:19037062|19037220 hsa-miR-218 0 0 1
chr22:19037062|19037220 hsa-miR-612 1 0 0
chr22:19037062|19037220 hsa-miR-623 1 1 0
chr22:19037062|19037220 hsa-miR-637 1 0 0
chr22:19037062|19037220 hsa-miR-658 1 0 0
chr22:19037062|19037220 hsa-miR-762 1 0 0
chr22:19037062|19037220 hsa-miR-920 1 0 0
chr22:19037062|19037220 hsa-miR-2110 1 0 0
chr22:19037062|19037220 hsa-miR-3141 1 0 0
chr22:19037062|19037220 hsa-miR-3188 1 0 0
chr22:19037062|19037220 hsa-miR-3652 1 0 0
chr22:19037062|19037220 hsa-miR-3909 0 1 0
chr22:19037062|19037220 hsa-miR-3135b 1 1 0
chr22:19037062|19037220 hsa-miR-4488 1 0 0
chr22:19037062|19037220 hsa-miR-4498 1 0 0
chr22:19037062|19037220 hsa-miR-4508 1 0 0
chr22:19037062|19037220 hsa-miR-4516 1 1 0
chr22:19037062|19037220 hsa-miR-4521 1 0 0
chr22:19037062|19037220 hsa-miR-4531 0 1 0
chr22:19037062|19037220 hsa-miR-4656 1 0 0
chr22:19037062|19037220 hsa-miR-4675 1 0 0
chr22:19037062|19037220 hsa-miR-4688 1 0 0
chr22:19037062|19037220 hsa-miR-4706 1 0 0
chr22:19037062|19037220 hsa-miR-4721 1 0 0
chr22:19037062|19037220 hsa-miR-4734 1 0 0
chr22:19037062|19037220 hsa-miR-4741 1 0 0
chr22:19037062|19037220 hsa-miR-4767 1 0 0
chr22:19037062|19037220 hsa-miR-5787 1 0 0
chr22:19037062|19037220 hsa-miR-6086 1 0 0
chr22:19037062|19037220 hsa-miR-7974 1 0 0
chr22:19037062|19037220 hsa-miR-12131 0 1 0
chr22:19037062|19037220 hsa-miR-4731-5p 1 0 0
chr22:19037062|19037220 hsa-miR-671-5p 1 0 0
chr22:19037062|19037220 hsa-miR-7106-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6894-5p 1 0 0
chr22:19037062|19037220 hsa-miR-4687-3p 1 0 0
chr22:19037062|19037220 hsa-miR-6089 1 0 0
chr22:19037062|19037220 hsa-miR-6880-5p 1 0 0
chr22:19037062|19037220 hsa-miR-4695-5p 0 1 0
chr22:19037062|19037220 hsa-miR-4722-5p 1 0 0
chr22:19037062|19037220 hsa-miR-3064-5p 0 1 0
chr22:19037062|19037220 hsa-miR-6806-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6721-5p 0 1 0
chr22:19037062|19037220 hsa-miR-5589-5p 1 0 0
chr22:19037062|19037220 hsa-miR-3605-5p 1 0 0
chr22:19037062|19037220 hsa-miR-185-3p 1 0 0
chr22:19037062|19037220 hsa-miR-6829-5p 1 0 0
chr22:19037062|19037220 hsa-miR-2467-5p 1 0 0
chr22:19037062|19037220 hsa-miR-2467-3p 0 1 0
chr22:19037062|19037220 hsa-miR-5088-5p 1 0 0
chr22:19037062|19037220 hsa-miR-30c-2-3p 1 0 0
chr22:19037062|19037220 hsa-miR-4732-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6847-5p 0 1 0
chr22:19037062|19037220 hsa-miR-4446-3p 0 1 0
chr22:19037062|19037220 hsa-miR-6830-5p 0 1 0
chr22:19037062|19037220 hsa-miR-3158-5p 0 1 0
chr22:19037062|19037220 hsa-miR-7112-5p 1 1 0
chr22:19037062|19037220 hsa-miR-3190-5p 0 1 0
chr22:19037062|19037220 hsa-miR-1233-5p 1 0 0
chr22:19037062|19037220 hsa-miR-4763-3p 1 0 0
chr22:19037062|19037220 hsa-miR-6778-5p 1 0 0
chr22:19037062|19037220 hsa-miR-5001-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6726-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6752-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6813-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6851-5p 1 0 0
chr22:19037062|19037220 hsa-miR-10401-5p 0 1 0
chr22:19037062|19037220 hsa-miR-5196-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6780b-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6846-5p 1 1 0
chr22:19037062|19037220 hsa-miR-6848-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6858-5p 1 0 0
chr22:19037062|19037220 hsa-miR-377-5p 1 0 0
chr22:19037062|19037220 hsa-miR-6884-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:19037062|19037220
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MPCPSACGIHGMLPASSSAASRGLLWPGLPC
Nucleotide Sequence CTGCCCTGCCCCAGTGCATGTGGGATCCACGGCATGCTTCCTGCTTCGTCCTCTGCAGCCAGTAGGGGACTCCTGTGGCCAGGACTTCCTTGTTAA
CircID chr22:19037062|19037220
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MMLEAVCGQACAPLGEGLLLNKEVLATGVPYWLQRTKQEACRGSHMHWGRAA
Nucleotide Sequence ATGATGCTGGAGGCTGTGTGCGGGCAGGCTTGTGCTCCCCTTGGAGAAGGGCTGCTACTTAACAAGGAAGTCCTGGCCACAGGAGTCCCCTACTGGCTGCAGAGGACGAAGCAGGAAGCATGCCGTGGATCCCACATGCACTGGGGCAGGGCAGCC
CircID chr22:19037062|19037220
ORF Type ORF3
Protein Length 48
Nucleotide Length 144
Protein Sequence MCAGRLVLPLEKGCYLTRKSWPQESPTGCRGRSRKHAVDPTCTGAGQP
Nucleotide Sequence CTGTGTGCGGGCAGGCTTGTGCTCCCCTTGGAGAAGGGCTGCTACTTAACAAGGAAGTCCTGGCCACAGGAGTCCCCTACTGGCTGCAGAGGACGAAGCAGGAAGCATGCCGTGGATCCCACATGCACTGGGGCAGGGCAGCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab