CircRNA Information

General Information
circRNA Basic Information
CircID chr22:19132276|19132526
Strand +
CircType exon
Host Gene ENSG00000100056.10;
Algorism CIRI2;
Sequence CATGCCCCCCAACCCCGACCCCCACCACACACAACGGGGCCATTGTCATGCTAGGTGCTTGCTTTCCCCACCTCAGCTCCGGAGATGTGATGGTCTTTGGCCCTGGAGGTCTCGGCCAGCCTGTCCTCCATCCTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTTGCACTCAGCGCGGTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:19132276|19132526 hsa-miR-19a-5p 0 0 1
chr22:19132276|19132526 hsa-miR-19a-3p 0 0 1
chr22:19132276|19132526 hsa-miR-130a-5p 0 0 1
chr22:19132276|19132526 hsa-miR-130a-3p 0 0 1
chr22:19132276|19132526 hsa-miR-301a-5p 0 0 1
chr22:19132276|19132526 hsa-miR-301a-3p 0 0 1
chr22:19132276|19132526 hsa-miR-130b-5p 0 0 1
chr22:19132276|19132526 hsa-miR-130b-3p 0 0 1
chr22:19132276|19132526 hsa-miR-432-5p 0 0 1
chr22:19132276|19132526 hsa-miR-432-3p 0 0 1
chr22:19132276|19132526 hsa-miR-454-5p 0 0 1
chr22:19132276|19132526 hsa-miR-454-3p 0 0 1
chr22:19132276|19132526 hsa-miR-765 0 0 1
chr22:19132276|19132526 hsa-miR-541-5p 0 0 1
chr22:19132276|19132526 hsa-miR-541-3p 0 0 1
chr22:19132276|19132526 hsa-miR-301b-5p 0 0 1
chr22:19132276|19132526 hsa-miR-301b-3p 0 0 1
chr22:19132276|19132526 hsa-miR-1203 0 0 1
chr22:19132276|19132526 hsa-miR-1304-5p 0 0 1
chr22:19132276|19132526 hsa-miR-1304-3p 0 0 1
chr22:19132276|19132526 hsa-miR-1275 0 1 1
chr22:19132276|19132526 hsa-miR-769-5p 0 1 1
chr22:19132276|19132526 hsa-miR-491-5p 0 0 1
chr22:19132276|19132526 hsa-miR-654-5p 0 0 1
chr22:19132276|19132526 hsa-miR-876-3p 0 0 1
chr22:19132276|19132526 hsa-miR-323-5p 0 0 1
chr22:19132276|19132526 hsa-miR-886-5p 0 0 1
chr22:19132276|19132526 hsa-miR-644 0 0 1
chr22:19132276|19132526 hsa-miR-138 0 0 1
chr22:19132276|19132526 hsa-miR-19b 0 0 1
chr22:19132276|19132526 hsa-miR-147 0 0 1
chr22:19132276|19132526 hsa-miR-608 1 0 0
chr22:19132276|19132526 hsa-miR-611 1 0 0
chr22:19132276|19132526 hsa-miR-762 1 0 0
chr22:19132276|19132526 hsa-miR-2110 0 1 0
chr22:19132276|19132526 hsa-miR-3131 1 0 0
chr22:19132276|19132526 hsa-miR-3153 1 1 0
chr22:19132276|19132526 hsa-miR-3175 1 0 0
chr22:19132276|19132526 hsa-miR-4281 1 0 0
chr22:19132276|19132526 hsa-miR-3621 1 0 0
chr22:19132276|19132526 hsa-miR-3654 0 1 0
chr22:19132276|19132526 hsa-miR-3666 0 1 0
chr22:19132276|19132526 hsa-miR-3907 1 0 0
chr22:19132276|19132526 hsa-miR-3918 0 1 0
chr22:19132276|19132526 hsa-miR-4466 1 0 0
chr22:19132276|19132526 hsa-miR-4488 1 0 0
chr22:19132276|19132526 hsa-miR-2392 0 1 0
chr22:19132276|19132526 hsa-miR-4507 1 0 0
chr22:19132276|19132526 hsa-miR-4534 0 1 0
chr22:19132276|19132526 hsa-miR-3978 1 1 0
chr22:19132276|19132526 hsa-miR-4651 1 0 0
chr22:19132276|19132526 hsa-miR-4656 1 0 0
chr22:19132276|19132526 hsa-miR-4669 1 0 0
chr22:19132276|19132526 hsa-miR-4710 1 0 0
chr22:19132276|19132526 hsa-miR-4739 1 0 0
chr22:19132276|19132526 hsa-miR-5682 0 1 0
chr22:19132276|19132526 hsa-miR-6076 0 1 0
chr22:19132276|19132526 hsa-miR-6085 1 0 0
chr22:19132276|19132526 hsa-miR-6086 1 0 0
chr22:19132276|19132526 hsa-miR-6745 0 1 0
chr22:19132276|19132526 hsa-miR-7704 1 0 0
chr22:19132276|19132526 hsa-miR-8077 0 1 0
chr22:19132276|19132526 hsa-miR-138-5p 0 1 0
chr22:19132276|19132526 hsa-miR-4747-3p 0 1 0
chr22:19132276|19132526 hsa-miR-92a-2-5p 1 1 0
chr22:19132276|19132526 hsa-miR-1247-3p 1 1 0
chr22:19132276|19132526 hsa-miR-6747-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6765-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6894-5p 1 0 0
chr22:19132276|19132526 hsa-miR-4687-3p 1 0 0
chr22:19132276|19132526 hsa-miR-6880-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6867-5p 1 0 0
chr22:19132276|19132526 hsa-miR-3064-5p 0 1 0
chr22:19132276|19132526 hsa-miR-7154-3p 0 1 0
chr22:19132276|19132526 hsa-miR-505-5p 0 1 0
chr22:19132276|19132526 hsa-miR-7160-5p 1 1 0
chr22:19132276|19132526 hsa-miR-6741-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6742-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6782-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6874-5p 0 1 0
chr22:19132276|19132526 hsa-miR-6821-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6810-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6884-3p 0 1 0
chr22:19132276|19132526 hsa-miR-615-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6786-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6835-5p 1 0 0
chr22:19132276|19132526 hsa-miR-1226-5p 1 0 0
chr22:19132276|19132526 hsa-miR-3944-3p 1 0 0
chr22:19132276|19132526 hsa-miR-6784-5p 1 0 0
chr22:19132276|19132526 hsa-miR-4640-5p 1 0 0
chr22:19132276|19132526 hsa-miR-1908-5p 1 0 0
chr22:19132276|19132526 hsa-miR-296-3p 1 0 0
chr22:19132276|19132526 hsa-miR-6749-5p 1 0 0
chr22:19132276|19132526 hsa-miR-3160-3p 0 1 0
chr22:19132276|19132526 hsa-miR-4638-3p 1 1 0
chr22:19132276|19132526 hsa-miR-7162-3p 0 1 0
chr22:19132276|19132526 hsa-miR-3065-3p 0 1 0
chr22:19132276|19132526 hsa-miR-4773 0 1 0
chr22:19132276|19132526 hsa-miR-5004-5p 0 1 0
chr22:19132276|19132526 hsa-miR-6768-3p 0 1 0
chr22:19132276|19132526 hsa-miR-221-5p 0 1 0
chr22:19132276|19132526 hsa-miR-6502-3p 0 1 0
chr22:19132276|19132526 hsa-miR-4524b-3p 0 1 0
chr22:19132276|19132526 hsa-miR-6769b-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6787-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6812-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6816-5p 1 0 0
chr22:19132276|19132526 hsa-miR-1343-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6726-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6737-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6752-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6756-5p 1 1 0
chr22:19132276|19132526 hsa-miR-6769a-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6803-5p 1 1 0
chr22:19132276|19132526 hsa-miR-7110-5p 1 0 0
chr22:19132276|19132526 hsa-miR-10401-5p 1 0 0
chr22:19132276|19132526 hsa-miR-1249-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6751-5p 1 1 0
chr22:19132276|19132526 hsa-miR-6797-5p 1 0 0
chr22:19132276|19132526 hsa-miR-4728-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6780b-5p 1 0 0
chr22:19132276|19132526 hsa-miR-1237-5p 1 0 0
chr22:19132276|19132526 hsa-miR-4685-5p 1 0 0
chr22:19132276|19132526 hsa-miR-4725-3p 1 0 0
chr22:19132276|19132526 hsa-miR-4726-5p 1 0 0
chr22:19132276|19132526 hsa-miR-675-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6795-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6846-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6848-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6858-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6887-5p 1 0 0
chr22:19132276|19132526 hsa-miR-3085-5p 1 0 0
chr22:19132276|19132526 hsa-miR-3940-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6731-5p 1 0 0
chr22:19132276|19132526 hsa-miR-4665-5p 1 1 0
chr22:19132276|19132526 hsa-miR-3173-3p 1 0 0
chr22:19132276|19132526 hsa-miR-4747-5p 1 0 0
chr22:19132276|19132526 hsa-miR-4472 0 1 0
chr22:19132276|19132526 hsa-miR-6790-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6724-5p 1 0 0
chr22:19132276|19132526 hsa-miR-6837-5p 0 1 0
chr22:19132276|19132526 hsa-miR-10392-3p 1 0 0
chr22:19132276|19132526 hsa-miR-1234-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:19132276|19132526
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MALEVSASLSSILFSFSGTTSSRCWVLAPSLWSGRWSGLKPVLVSSLHSAR
Nucleotide Sequence TTGGCCCTGGAGGTCTCGGCCAGCCTGTCCTCCATCCTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTTGCACTCAGCGCGG
CircID chr22:19132276|19132526
ORF Type ORF2
Protein Length 83
Nucleotide Length 249
Protein Sequence MPPNPDPHHTQRGHCHARCLLSPPQLRRCDGLWPWRSRPACPPSCSRSRAPPAAGAGFWLQACGRAGGRASSLSWCPVCTQRG
Nucleotide Sequence ATGCCCCCCAACCCCGACCCCCACCACACACAACGGGGCCATTGTCATGCTAGGTGCTTGCTTTCCCCACCTCAGCTCCGGAGATGTGATGGTCTTTGGCCCTGGAGGTCTCGGCCAGCCTGTCCTCCATCCTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTTGCACTCAGCGCGGT
CircID chr22:19132276|19132526
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MLGACFPHLSSGDVMVFGPGGLGQPVLHPVLVLGHHQQPVLGFGSKLVVGPVVGPQACLGVQFALSAV
Nucleotide Sequence ATGCTAGGTGCTTGCTTTCCCCACCTCAGCTCCGGAGATGTGATGGTCTTTGGCCCTGGAGGTCTCGGCCAGCCTGTCCTCCATCCTGTTCTCGTTCTCGGGCACCACCAGCAGCCGGTGCTGGGTTTTGGCTCCAAGCTTGTGGTCGGGCCGGTGGTCGGGCCTCAAGCCTGTCTTGGTGTCCAGTTTGCACTCAGCGCGGTA
CircID chr22:19132276|19132526
ORF Type ORF4
Protein Length 60
Nucleotide Length 183
Protein Sequence MDTKTGLRPDHRPDHKLGAKTQHRLLVVPENENRMEDRLAETSRAKDHHISGAEVGKAST
Nucleotide Sequence CTGGACACCAAGACAGGCTTGAGGCCCGACCACCGGCCCGACCACAAGCTTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACGAGAACAGGATGGAGGACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATCACATCTCCGGAGCTGAGGTGGGGAAAGCAAGCACCTAG
CircID chr22:19132276|19132526
ORF Type ORF5
Protein Length 61
Nucleotide Length 183
Protein Sequence MEPKPSTGCWWCPRTRTGWRTGWPRPPGPKTITSPELRWGKQAPSMTMAPLCVVGVGVGGH
Nucleotide Sequence TTGGAGCCAAAACCCAGCACCGGCTGCTGGTGGTGCCCGAGAACGAGAACAGGATGGAGGACAGGCTGGCCGAGACCTCCAGGGCCAAAGACCATCACATCTCCGGAGCTGAGGTGGGGAAAGCAAGCACCTAGCATGACAATGGCCCCGTTGTGTGTGGTGGGGGTCGGGGTTGGGGGGCAT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab