CircRNA Information

General Information
circRNA Basic Information
CircID chr22:19451242|19451452
Strand -
CircType exon
Host Gene ENSG00000070010.17;
Algorism CIRI2;
Sequence TTCCTGTCTAGTATACTCCCAAGGCTACAGAACTGAATTCTGTAAAAAAGAATTCCATGATGTAGGAGGGCCAGTTTTCTACCAGTGGACATTGTTGTGGTAAGCAGCTTAATGTATTTGCACACAACTCTGATTTTTTTTAGAGCTCAAATTCCTGGGTCAAAGTGTGTACACACTTTTAATGCTTTTAACATATAGAGACCAACCAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:19451242|19451452 hsa-miR-19a-5p 0 0 1
chr22:19451242|19451452 hsa-miR-19a-3p 0 0 1
chr22:19451242|19451452 hsa-miR-379-5p 0 0 1
chr22:19451242|19451452 hsa-miR-379-3p 0 0 1
chr22:19451242|19451452 hsa-miR-328-5p 0 0 1
chr22:19451242|19451452 hsa-miR-328-3p 0 0 1
chr22:19451242|19451452 hsa-miR-193b-5p 0 0 1
chr22:19451242|19451452 hsa-miR-193b-3p 0 0 1
chr22:19451242|19451452 hsa-miR-595 0 0 1
chr22:19451242|19451452 hsa-miR-603 0 0 1
chr22:19451242|19451452 hsa-miR-548e-5p 0 0 1
chr22:19451242|19451452 hsa-miR-548e-3p 0 0 1
chr22:19451242|19451452 hsa-miR-1291 0 0 1
chr22:19451242|19451452 hsa-miR-548n 0 0 1
chr22:19451242|19451452 hsa-miR-28-3p 0 0 1
chr22:19451242|19451452 hsa-miR-490-5p 0 0 1
chr22:19451242|19451452 hsa-miR-140-3p 0 0 1
chr22:19451242|19451452 hsa-miR-193a-3p 0 0 1
chr22:19451242|19451452 hsa-miR-548a-3p 0 1 1
chr22:19451242|19451452 hsa-miR-362-3p 0 0 1
chr22:19451242|19451452 hsa-miR-548c-3p 0 0 1
chr22:19451242|19451452 hsa-miR-323-3p 0 0 1
chr22:19451242|19451452 hsa-miR-548f 0 0 1
chr22:19451242|19451452 hsa-miR-19b 0 0 1
chr22:19451242|19451452 hsa-miR-329 0 0 1
chr22:19451242|19451452 hsa-miR-147 0 0 1
chr22:19451242|19451452 hsa-miR-499-3p 0 0 1
chr22:19451242|19451452 hsa-miR-3137 1 1 0
chr22:19451242|19451452 hsa-miR-4277 0 1 0
chr22:19451242|19451452 hsa-miR-6840-3p 0 1 0
chr22:19451242|19451452 hsa-miR-3162-5p 1 0 0
chr22:19451242|19451452 hsa-miR-887-5p 0 1 0
chr22:19451242|19451452 hsa-miR-660-3p 0 1 0
chr22:19451242|19451452 hsa-miR-3177-5p 0 1 0
chr22:19451242|19451452 hsa-miR-19b-3p 0 1 0
chr22:19451242|19451452 hsa-miR-5003-5p 0 1 0
chr22:19451242|19451452 hsa-miR-337-3p 0 1 0
chr22:19451242|19451452 hsa-miR-6763-5p 1 0 0
chr22:19451242|19451452 hsa-miR-6764-5p 1 0 0
chr22:19451242|19451452 hsa-miR-216b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:19451242|19451452
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MYLHTTLIFFRAQIPGSKCVHTFNAFNI
Nucleotide Sequence ATGTATTTGCACACAACTCTGATTTTTTTTAGAGCTCAAATTCCTGGGTCAAAGTGTGTACACACTTTTAATGCTTTTAACATATAG

CircID chr22:19451242|19451452
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MCANTLSCLPQQCPLVENWPSYIMEFFFTEFSSVALGVY
Nucleotide Sequence TTGTGTGCAAATACATTAAGCTGCTTACCACAACAATGTCCACTGGTAGAAAACTGGCCCTCCTACATCATGGAATTCTTTTTTACAGAATTCAGTTCTGTAGCCTTGGGAGTATACTAG

CircID chr22:19451242|19451452
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MLTTTMSTGRKLALLHHGILFYRIQFCSLGSILDR
Nucleotide Sequence CTGCTTACCACAACAATGTCCACTGGTAGAAAACTGGCCCTCCTACATCATGGAATTCTTTTTTACAGAATTCAGTTCTGTAGCCTTGGGAGTATACTAGACAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites