CircRNA Information

General Information
circRNA Basic Information
CircID chr22:20138419|20138597
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence ACCCCCCACCACTTCCCATCTTCCCAGCCATCAGCACTTGGCTCCAAGGCCACCCCCTCTTCCGGGAAGCTTTCCAGGACTCCAGGCTGCCCTCTGCAGCTTCCCTATAAGGTGTGCCCTCACACACCTTCCTGAAAGGCGCCTTCCTCAGCCCTTAACGGGCCTGGCCCGAGTCCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:20138419|20138597 hsa-miR-302a-5p 0 0 1
chr22:20138419|20138597 hsa-miR-302a-3p 0 0 1
chr22:20138419|20138597 hsa-miR-302b-5p 0 0 1
chr22:20138419|20138597 hsa-miR-302b-3p 0 0 1
chr22:20138419|20138597 hsa-miR-302c-5p 0 0 1
chr22:20138419|20138597 hsa-miR-302c-3p 0 0 1
chr22:20138419|20138597 hsa-miR-302d-5p 0 0 1
chr22:20138419|20138597 hsa-miR-302d-3p 0 0 1
chr22:20138419|20138597 hsa-miR-372-5p 0 0 1
chr22:20138419|20138597 hsa-miR-372-3p 0 0 1
chr22:20138419|20138597 hsa-miR-373-5p 0 0 1
chr22:20138419|20138597 hsa-miR-373-3p 0 0 1
chr22:20138419|20138597 hsa-miR-432-5p 0 0 1
chr22:20138419|20138597 hsa-miR-432-3p 0 0 1
chr22:20138419|20138597 hsa-miR-520e-5p 0 0 1
chr22:20138419|20138597 hsa-miR-520e-3p 0 0 1
chr22:20138419|20138597 hsa-miR-520b-5p 0 0 1
chr22:20138419|20138597 hsa-miR-520b-3p 0 0 1
chr22:20138419|20138597 hsa-miR-608 1 0 1
chr22:20138419|20138597 hsa-miR-541-5p 0 0 1
chr22:20138419|20138597 hsa-miR-541-3p 0 0 1
chr22:20138419|20138597 hsa-miR-873-5p 0 0 1
chr22:20138419|20138597 hsa-miR-873-3p 0 0 1
chr22:20138419|20138597 hsa-miR-1228-5p 0 0 1
chr22:20138419|20138597 hsa-miR-1228-3p 0 0 1
chr22:20138419|20138597 hsa-miR-1294 0 0 1
chr22:20138419|20138597 hsa-miR-302e 0 0 1
chr22:20138419|20138597 hsa-miR-512-3p 0 0 1
chr22:20138419|20138597 hsa-miR-1289 0 0 1
chr22:20138419|20138597 hsa-miR-654-5p 0 0 1
chr22:20138419|20138597 hsa-miR-566 0 0 1
chr22:20138419|20138597 hsa-miR-875-3p 0 0 1
chr22:20138419|20138597 hsa-miR-520d-3p 0 0 1
chr22:20138419|20138597 hsa-miR-524-3p 0 0 1
chr22:20138419|20138597 hsa-miR-525-3p 0 0 1
chr22:20138419|20138597 hsa-miR-520a-3p 0 0 1
chr22:20138419|20138597 hsa-miR-520c-3p 0 0 1
chr22:20138419|20138597 hsa-miR-1254 0 0 1
chr22:20138419|20138597 hsa-miR-658 1 0 0
chr22:20138419|20138597 hsa-miR-762 1 0 0
chr22:20138419|20138597 hsa-miR-920 1 0 0
chr22:20138419|20138597 hsa-miR-1293 1 0 0
chr22:20138419|20138597 hsa-miR-3132 1 0 0
chr22:20138419|20138597 hsa-miR-3147 1 0 0
chr22:20138419|20138597 hsa-miR-3196 1 0 0
chr22:20138419|20138597 hsa-miR-4314 1 0 0
chr22:20138419|20138597 hsa-miR-4271 1 0 0
chr22:20138419|20138597 hsa-miR-3652 1 0 0
chr22:20138419|20138597 hsa-miR-3689c 1 0 0
chr22:20138419|20138597 hsa-miR-4492 1 0 0
chr22:20138419|20138597 hsa-miR-4498 1 0 0
chr22:20138419|20138597 hsa-miR-4505 1 0 0
chr22:20138419|20138597 hsa-miR-2392 1 0 0
chr22:20138419|20138597 hsa-miR-4516 1 0 0
chr22:20138419|20138597 hsa-miR-4647 1 0 0
chr22:20138419|20138597 hsa-miR-4656 1 0 0
chr22:20138419|20138597 hsa-miR-4674 1 0 0
chr22:20138419|20138597 hsa-miR-4688 1 0 0
chr22:20138419|20138597 hsa-miR-4689 1 0 0
chr22:20138419|20138597 hsa-miR-4739 1 0 0
chr22:20138419|20138597 hsa-miR-4741 1 0 0
chr22:20138419|20138597 hsa-miR-5787 1 0 0
chr22:20138419|20138597 hsa-miR-6085 1 0 0
chr22:20138419|20138597 hsa-miR-6086 1 0 0
chr22:20138419|20138597 hsa-miR-6860 1 0 0
chr22:20138419|20138597 hsa-miR-8075 1 0 0
chr22:20138419|20138597 hsa-miR-8089 1 0 0
chr22:20138419|20138597 hsa-miR-9500 1 0 0
chr22:20138419|20138597 hsa-miR-9718 1 0 0
chr22:20138419|20138597 hsa-miR-12115 1 0 0
chr22:20138419|20138597 hsa-miR-6765-5p 1 0 0
chr22:20138419|20138597 hsa-miR-671-5p 1 0 0
chr22:20138419|20138597 hsa-miR-3150a-3p 1 0 0
chr22:20138419|20138597 hsa-miR-6861-5p 1 0 0
chr22:20138419|20138597 hsa-miR-7106-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6825-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6894-5p 1 0 0
chr22:20138419|20138597 hsa-miR-3192-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6746-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6727-5p 1 0 0
chr22:20138419|20138597 hsa-miR-197-5p 1 0 0
chr22:20138419|20138597 hsa-miR-8069 1 0 0
chr22:20138419|20138597 hsa-miR-6748-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6829-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6732-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6805-5p 1 0 0
chr22:20138419|20138597 hsa-miR-1226-5p 1 0 0
chr22:20138419|20138597 hsa-miR-204-3p 1 0 0
chr22:20138419|20138597 hsa-miR-296-3p 1 0 0
chr22:20138419|20138597 hsa-miR-6749-5p 1 0 0
chr22:20138419|20138597 hsa-miR-4787-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6789-5p 1 0 0
chr22:20138419|20138597 hsa-miR-3162-5p 1 0 0
chr22:20138419|20138597 hsa-miR-3191-3p 1 0 0
chr22:20138419|20138597 hsa-miR-1207-5p 1 0 0
chr22:20138419|20138597 hsa-miR-3689b-3p 1 0 0
chr22:20138419|20138597 hsa-miR-4763-3p 1 0 0
chr22:20138419|20138597 hsa-miR-6769b-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6778-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6812-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6870-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6726-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6737-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6743-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6752-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6754-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6756-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6803-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6813-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6819-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6842-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6851-5p 1 0 0
chr22:20138419|20138597 hsa-miR-1249-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6751-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6763-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6779-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6788-5p 1 0 0
chr22:20138419|20138597 hsa-miR-5196-5p 1 0 0
chr22:20138419|20138597 hsa-miR-3689a-3p 1 0 0
chr22:20138419|20138597 hsa-miR-4632-5p 1 0 0
chr22:20138419|20138597 hsa-miR-4725-3p 1 0 0
chr22:20138419|20138597 hsa-miR-6729-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6846-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6848-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6858-5p 1 0 0
chr22:20138419|20138597 hsa-miR-939-5p 1 0 0
chr22:20138419|20138597 hsa-miR-4700-5p 1 0 0
chr22:20138419|20138597 hsa-miR-10398-3p 1 0 0
chr22:20138419|20138597 hsa-miR-4646-5p 1 0 0
chr22:20138419|20138597 hsa-miR-6891-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:20138419|20138597
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MAPRPPPLPGSFPGLQAALCSFPIRCALTHLPERRLPQPLTGLARVP
Nucleotide Sequence TTGGCTCCAAGGCCACCCCCTCTTCCGGGAAGCTTTCCAGGACTCCAGGCTGCCCTCTGCAGCTTCCCTATAAGGTGTGCCCTCACACACCTTCCTGAAAGGCGCCTTCCTCAGCCCTTAACGGGCCTGGCCCGAGTCCCC
CircID chr22:20138419|20138597
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MESFPEEGVALEPSADGWEDGKWWG
Nucleotide Sequence CTGGAAAGCTTCCCGGAAGAGGGGGTGGCCTTGGAGCCAAGTGCTGATGGCTGGGAAGATGGGAAGTGGTGGGGG
CircID chr22:20138419|20138597
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MRKAPFRKVCEGTPYREAAEGSLESWKASRKRGWPWSQVLMAGKMGSGGG
Nucleotide Sequence CTGAGGAAGGCGCCTTTCAGGAAGGTGTGTGAGGGCACACCTTATAGGGAAGCTGCAGAGGGCAGCCTGGAGTCCTGGAAAGCTTCCCGGAAGAGGGGGTGGCCTTGGAGCCAAGTGCTGATGGCTGGGAAGATGGGAAGTGGTGGGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab