CircRNA Information

General Information
circRNA Basic Information
CircID chr22:20441731|20441863
Strand +
CircType exon
Host Gene ENSG00000099910.15;
Algorism CIRI2;
Sequence GTCACTGCAGGAACTGCTTCTGAAAGGCTTTGGCCTTCCTCAGTGAGCCCTGGAGGGGTTGGCCTTCTCTCCTCCCTGCCTAGATCAGTCCTTCTCCAAAAGGACCTGGGAGCTGGCAGCCTGGGCAGGGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:20441731|20441863 hsa-miR-185-5p 0 0 1
chr22:20441731|20441863 hsa-miR-185-3p 0 0 1
chr22:20441731|20441863 hsa-miR-620 0 0 1
chr22:20441731|20441863 hsa-miR-645 0 0 1
chr22:20441731|20441863 hsa-miR-765 0 1 1
chr22:20441731|20441863 hsa-miR-940 0 0 1
chr22:20441731|20441863 hsa-miR-1202 0 0 1
chr22:20441731|20441863 hsa-miR-1270 0 0 1
chr22:20441731|20441863 hsa-miR-1321 0 0 1
chr22:20441731|20441863 hsa-miR-1207-5p 0 1 1
chr22:20441731|20441863 hsa-miR-768-5p 0 0 1
chr22:20441731|20441863 hsa-miR-3142 0 1 0
chr22:20441731|20441863 hsa-miR-3169 0 1 0
chr22:20441731|20441863 hsa-miR-4306 0 1 0
chr22:20441731|20441863 hsa-miR-4270 0 1 0
chr22:20441731|20441863 hsa-miR-4441 0 1 0
chr22:20441731|20441863 hsa-miR-4493 0 1 0
chr22:20441731|20441863 hsa-miR-4516 0 1 0
chr22:20441731|20441863 hsa-miR-4531 0 1 0
chr22:20441731|20441863 hsa-miR-3972 1 1 0
chr22:20441731|20441863 hsa-miR-4706 0 1 0
chr22:20441731|20441863 hsa-miR-4739 0 1 0
chr22:20441731|20441863 hsa-miR-8078 0 1 0
chr22:20441731|20441863 hsa-miR-4726-3p 0 1 0
chr22:20441731|20441863 hsa-miR-7106-5p 0 1 0
chr22:20441731|20441863 hsa-miR-6510-5p 0 1 0
chr22:20441731|20441863 hsa-miR-4753-5p 0 1 0
chr22:20441731|20441863 hsa-miR-6770-5p 0 1 0
chr22:20441731|20441863 hsa-miR-3194-5p 1 0 0
chr22:20441731|20441863 hsa-miR-3934-3p 0 1 0
chr22:20441731|20441863 hsa-miR-5088-5p 0 1 0
chr22:20441731|20441863 hsa-miR-7113-3p 0 1 0
chr22:20441731|20441863 hsa-miR-4740-5p 0 1 0
chr22:20441731|20441863 hsa-miR-5189-3p 0 1 0
chr22:20441731|20441863 hsa-miR-6768-3p 0 1 0
chr22:20441731|20441863 hsa-miR-4727-5p 0 1 0
chr22:20441731|20441863 hsa-miR-4763-3p 0 1 0
chr22:20441731|20441863 hsa-miR-6893-5p 0 1 0
chr22:20441731|20441863 hsa-miR-11181-3p 0 1 0
chr22:20441731|20441863 hsa-miR-1249-5p 0 1 0
chr22:20441731|20441863 hsa-miR-6808-5p 0 1 0
chr22:20441731|20441863 hsa-miR-7111-5p 0 1 0
chr22:20441731|20441863 hsa-miR-4728-5p 0 1 0
chr22:20441731|20441863 hsa-miR-4685-5p 1 1 0
chr22:20441731|20441863 hsa-miR-6876-5p 0 1 0
chr22:20441731|20441863 hsa-miR-6810-3p 0 1 0
chr22:20441731|20441863 hsa-miR-6837-5p 0 1 0
chr22:20441731|20441863 hsa-miR-181b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:20441731|20441863
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MEGLAFSPPCLDQSFSKRTWELAAWAGG
Nucleotide Sequence CTGGAGGGGTTGGCCTTCTCTCCTCCCTGCCTAGATCAGTCCTTCTCCAAAAGGACCTGGGAGCTGGCAGCCTGGGCAGGGGGG

CircID chr22:20441731|20441863
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MPRLPAPRSFWRRTDLGREERRPTPPGLTEEGQSLSEAVPAV
Nucleotide Sequence CTGCCCAGGCTGCCAGCTCCCAGGTCCTTTTGGAGAAGGACTGATCTAGGCAGGGAGGAGAGAAGGCCAACCCCTCCAGGGCTCACTGAGGAAGGCCAAAGCCTTTCAGAAGCAGTTCCTGCAGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites