CircRNA Information

General Information
circRNA Basic Information
CircID chr22:21697686|21697838
Strand -
CircType exon
Host Gene ENSG00000100023.16;
Algorism CIRI2;
Sequence CGTCCAGCCTCACCCGGTGGCCTGCACAGTGAGGGAAGGGCTTCAGGGCCATCTGCTCCCAGGGCAGGGGACAGGCCACCAAGGACCTTTGGCAAATGAAGGTTTACATTTCTGTAGTTTGTTTGTTTTAGAGCTTAATTTGTAGTTTTTTAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:21697686|21697838 hsa-miR-30a-5p 0 0 1
chr22:21697686|21697838 hsa-miR-30a-3p 0 0 1
chr22:21697686|21697838 hsa-miR-30d-5p 0 0 1
chr22:21697686|21697838 hsa-miR-30d-3p 0 0 1
chr22:21697686|21697838 hsa-miR-205-5p 0 0 1
chr22:21697686|21697838 hsa-miR-205-3p 0 0 1
chr22:21697686|21697838 hsa-miR-30b-5p 0 0 1
chr22:21697686|21697838 hsa-miR-30b-3p 0 0 1
chr22:21697686|21697838 hsa-miR-30e-5p 0 0 1
chr22:21697686|21697838 hsa-miR-30e-3p 0 0 1
chr22:21697686|21697838 hsa-miR-328-5p 0 0 1
chr22:21697686|21697838 hsa-miR-328-3p 0 0 1
chr22:21697686|21697838 hsa-miR-495-5p 0 0 1
chr22:21697686|21697838 hsa-miR-495-3p 0 0 1
chr22:21697686|21697838 hsa-miR-579-5p 0 0 1
chr22:21697686|21697838 hsa-miR-579-3p 0 0 1
chr22:21697686|21697838 hsa-miR-874-5p 0 0 1
chr22:21697686|21697838 hsa-miR-874-3p 0 0 1
chr22:21697686|21697838 hsa-miR-920 -3 0 1
chr22:21697686|21697838 hsa-miR-1208 -3 0 1
chr22:21697686|21697838 hsa-miR-1291 -13 0 1
chr22:21697686|21697838 hsa-miR-1283 -6 0 1
chr22:21697686|21697838 hsa-miR-485-5p 0 1 1
chr22:21697686|21697838 hsa-miR-146b-3p -4 0 1
chr22:21697686|21697838 hsa-miR-331-3p -6 0 1
chr22:21697686|21697838 hsa-miR-642 0 0 1
chr22:21697686|21697838 hsa-miR-30c 0 0 1
chr22:21697686|21697838 hsa-miR-129-3p 0 0 1
chr22:21697686|21697838 hsa-miR-4316 0 1 0
chr22:21697686|21697838 hsa-miR-7976 -12 1 0
chr22:21697686|21697838 hsa-miR-6796-3p -6 1 0
chr22:21697686|21697838 hsa-miR-6735-3p -14 1 0
chr22:21697686|21697838 hsa-miR-1266-3p -13 1 0
chr22:21697686|21697838 hsa-miR-7843-3p -10 1 0
chr22:21697686|21697838 hsa-miR-6886-3p -8 1 0
chr22:21697686|21697838 hsa-miR-6748-3p -5 1 0
chr22:21697686|21697838 hsa-miR-6734-3p -7 1 0
chr22:21697686|21697838 hsa-miR-6756-5p 0 1 0
chr22:21697686|21697838 hsa-miR-939-5p 0 1 0
chr22:21697686|21697838 hsa-miR-6511b-5p -14 1 0
chr22:21697686|21697838 hsa-miR-6753-3p -18 1 0
chr22:21697686|21697838 hsa-miR-6775-3p -16 1 0
chr22:21697686|21697838 hsa-miR-129-1-3p -3 1 0
chr22:21697686|21697838 hsa-miR-129-2-3p -5 1 0
chr22:21697686|21697838 hsa-miR-664b-3p -8 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:21697686|21697838
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MHSEGRASGPSAPRAGDRPPRTFGK
Nucleotide Sequence CTGCACAGTGAGGGAAGGGCTTCAGGGCCATCTGCTCCCAGGGCAGGGGACAGGCCACCAAGGACCTTTGGCAAATGA

CircID chr22:21697686|21697838
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MLPGQGTGHQGPLANEGLHFCSLFVLELNL
Nucleotide Sequence CTGCTCCCAGGGCAGGGGACAGGCCACCAAGGACCTTTGGCAAATGAAGGTTTACATTTCTGTAGTTTGTTTGTTTTAGAGCTTAATTTGTAG

CircID chr22:21697686|21697838
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MPKVLGGLSPALGADGPEALPSLCRPPGEAG
Nucleotide Sequence TTGCCAAAGGTCCTTGGTGGCCTGTCCCCTGCCCTGGGAGCAGATGGCCCTGAAGCCCTTCCCTCACTGTGCAGGCCACCGGGTGAGGCTGGA

CircID chr22:21697686|21697838
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MVACPLPWEQMALKPFPHCAGHRVRLD
Nucleotide Sequence TTGGTGGCCTGTCCCCTGCCCTGGGAGCAGATGGCCCTGAAGCCCTTCCCTCACTGTGCAGGCCACCGGGTGAGGCTGGAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites