CircRNA Information

General Information
circRNA Basic Information
CircID chr22:21709312|21709508
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCACACTTCCCAGTGCACACAGGAGCCCCAGAGGCAATGAGAGAGCAGAAACTCTGCCTCGTTCAACAGTTTCTATCTCAGATGATGAACAGAAATGAGGAGCCTCTCACTATTACCTACTGAAAATACAAGCAGGTAAATGTTCTTCTCTTGAGTTAAACAGGAAACCTAAGAGATTCCTGGCTGGGCGTGGTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:21709312|21709508 hsa-miR-197-5p 0 0 1
chr22:21709312|21709508 hsa-miR-197-3p 0 0 1
chr22:21709312|21709508 hsa-miR-326 0 0 1
chr22:21709312|21709508 hsa-miR-335-5p 0 0 1
chr22:21709312|21709508 hsa-miR-335-3p 0 0 1
chr22:21709312|21709508 hsa-miR-595 0 0 1
chr22:21709312|21709508 hsa-miR-633 0 0 1
chr22:21709312|21709508 hsa-miR-637 1 0 1
chr22:21709312|21709508 hsa-miR-643 0 0 1
chr22:21709312|21709508 hsa-miR-653-5p 0 0 1
chr22:21709312|21709508 hsa-miR-653-3p 0 0 1
chr22:21709312|21709508 hsa-miR-887-5p 0 0 1
chr22:21709312|21709508 hsa-miR-887-3p 0 0 1
chr22:21709312|21709508 hsa-miR-216b-5p 0 0 1
chr22:21709312|21709508 hsa-miR-216b-3p 0 0 1
chr22:21709312|21709508 hsa-miR-921 0 0 1
chr22:21709312|21709508 hsa-miR-936 0 0 1
chr22:21709312|21709508 hsa-miR-1206 0 0 1
chr22:21709312|21709508 hsa-miR-1253 0 1 1
chr22:21709312|21709508 hsa-miR-548g-5p 0 0 1
chr22:21709312|21709508 hsa-miR-548g-3p 0 0 1
chr22:21709312|21709508 hsa-miR-1267 0 0 1
chr22:21709312|21709508 hsa-miR-1827 0 0 1
chr22:21709312|21709508 hsa-miR-767-3p 0 0 1
chr22:21709312|21709508 hsa-miR-199b-3p 0 0 1
chr22:21709312|21709508 hsa-miR-199a-3p 0 0 1
chr22:21709312|21709508 hsa-miR-330-5p 1 1 1
chr22:21709312|21709508 hsa-miR-220b 0 0 1
chr22:21709312|21709508 hsa-miR-544 0 0 1
chr22:21709312|21709508 hsa-miR-760 1 0 0
chr22:21709312|21709508 hsa-miR-4489 1 0 0
chr22:21709312|21709508 hsa-miR-8089 1 0 0
chr22:21709312|21709508 hsa-miR-510-5p 0 1 0
chr22:21709312|21709508 hsa-miR-23b-5p 1 0 0
chr22:21709312|21709508 hsa-miR-6776-5p 1 0 0
chr22:21709312|21709508 hsa-miR-23a-5p 1 0 0
chr22:21709312|21709508 hsa-miR-1343-3p 1 0 0
chr22:21709312|21709508 hsa-miR-615-5p 1 0 0
chr22:21709312|21709508 hsa-miR-4738-3p 0 1 0
chr22:21709312|21709508 hsa-miR-6784-5p 1 0 0
chr22:21709312|21709508 hsa-let-7b-5p 0 1 0
chr22:21709312|21709508 hsa-miR-6800-5p 0 1 0
chr22:21709312|21709508 hsa-let-7i-5p 0 1 0
chr22:21709312|21709508 hsa-miR-660-3p 1 1 0
chr22:21709312|21709508 hsa-miR-6828-3p 0 1 0
chr22:21709312|21709508 hsa-miR-3675-5p 1 0 0
chr22:21709312|21709508 hsa-miR-3152-5p 0 1 0
chr22:21709312|21709508 hsa-miR-6855-5p 1 0 0
chr22:21709312|21709508 hsa-miR-4646-5p 0 1 0
chr22:21709312|21709508 hsa-miR-1912-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:21709312|21709508
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MKIQAGKCSSLELNRKPKRFLAGRG
Nucleotide Sequence CTGAAAATACAAGCAGGTAAATGTTCTTCTCTTGAGTTAAACAGGAAACCTAAGAGATTCCTGGCTGGGCGTGGT

CircID chr22:21709312|21709508
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MREQKLCLVQQFLSQMMNRNEEPLTITY
Nucleotide Sequence ATGAGAGAGCAGAAACTCTGCCTCGTTCAACAGTTTCTATCTCAGATGATGAACAGAAATGAGGAGCCTCTCACTATTACCTACTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites