CircRNA Information

General Information
circRNA Basic Information
CircID chr22:22409797|22410077
Strand +
CircType exon
Host Gene ENSG00000211653.2;
Algorism CIRI2;
Sequence CTGCCCCGATGTTGGAGCTGCTCCCAGTGCAGGAGATGGTGACCCTCTGCCCTGGGGCCCCAGACACTGAGGGCGGCTGCGTCAGCACAGACTGGGCCCAGGACCCTGGAAGTGGGAGAGACACAGGCATCATTATTCGGCTTCTAGAGACAACAGGAGAAAGCAAGAATCCATAGGCTTCCCAGGGCCCCTCCCCTGGACCTGTATCCAGTCACCTGTGCAGTGAGCGAGGAGAGTGAGGAGGAGAGGAGACCAGGCCATGCTGGAGATTGTCCTGAGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:22409797|22410077 hsa-miR-134-5p 0 0 1
chr22:22409797|22410077 hsa-miR-134-3p 0 0 1
chr22:22409797|22410077 hsa-miR-150-5p 0 0 1
chr22:22409797|22410077 hsa-miR-150-3p 0 0 1
chr22:22409797|22410077 hsa-miR-510-5p 0 0 1
chr22:22409797|22410077 hsa-miR-510-3p 0 0 1
chr22:22409797|22410077 hsa-miR-552-5p 0 0 1
chr22:22409797|22410077 hsa-miR-552-3p 0 0 1
chr22:22409797|22410077 hsa-miR-593-5p 0 0 1
chr22:22409797|22410077 hsa-miR-593-3p 0 0 1
chr22:22409797|22410077 hsa-miR-622 0 0 1
chr22:22409797|22410077 hsa-miR-637 0 0 1
chr22:22409797|22410077 hsa-miR-646 0 0 1
chr22:22409797|22410077 hsa-miR-766-5p 0 0 1
chr22:22409797|22410077 hsa-miR-766-3p 0 0 1
chr22:22409797|22410077 hsa-miR-920 0 0 1
chr22:22409797|22410077 hsa-miR-1231 0 0 1
chr22:22409797|22410077 hsa-miR-1291 0 0 1
chr22:22409797|22410077 hsa-miR-1243 0 0 1
chr22:22409797|22410077 hsa-miR-1246 0 0 1
chr22:22409797|22410077 hsa-miR-1251-5p 0 0 1
chr22:22409797|22410077 hsa-miR-1251-3p 0 0 1
chr22:22409797|22410077 hsa-miR-1322 0 0 1
chr22:22409797|22410077 hsa-miR-671-5p 1 0 1
chr22:22409797|22410077 hsa-miR-125a-3p 0 0 1
chr22:22409797|22410077 hsa-miR-296-5p 0 0 1
chr22:22409797|22410077 hsa-miR-486-3p 0 0 1
chr22:22409797|22410077 hsa-miR-532-3p 0 0 1
chr22:22409797|22410077 hsa-miR-423-5p 0 0 1
chr22:22409797|22410077 hsa-miR-628-5p 0 0 1
chr22:22409797|22410077 hsa-miR-338-3p 0 0 1
chr22:22409797|22410077 hsa-miR-326 1 0 0
chr22:22409797|22410077 hsa-miR-635 1 0 0
chr22:22409797|22410077 hsa-miR-661 1 0 0
chr22:22409797|22410077 hsa-miR-760 1 0 0
chr22:22409797|22410077 hsa-miR-1182 1 0 0
chr22:22409797|22410077 hsa-miR-1204 1 0 0
chr22:22409797|22410077 hsa-miR-4281 1 0 0
chr22:22409797|22410077 hsa-miR-4292 1 0 0
chr22:22409797|22410077 hsa-miR-3661 1 0 0
chr22:22409797|22410077 hsa-miR-4440 1 0 0
chr22:22409797|22410077 hsa-miR-4449 1 0 0
chr22:22409797|22410077 hsa-miR-4674 1 0 0
chr22:22409797|22410077 hsa-miR-6860 1 0 0
chr22:22409797|22410077 hsa-miR-3194-3p 1 0 0
chr22:22409797|22410077 hsa-miR-7114-5p 1 0 0
chr22:22409797|22410077 hsa-miR-6089 1 0 0
chr22:22409797|22410077 hsa-miR-197-5p 1 0 0
chr22:22409797|22410077 hsa-miR-4728-3p 1 0 0
chr22:22409797|22410077 hsa-miR-7110-3p 1 0 0
chr22:22409797|22410077 hsa-miR-877-3p 1 0 0
chr22:22409797|22410077 hsa-miR-6810-5p 1 0 0
chr22:22409797|22410077 hsa-miR-6735-3p 1 0 0
chr22:22409797|22410077 hsa-miR-6740-3p 1 0 0
chr22:22409797|22410077 hsa-miR-4713-5p 1 0 0
chr22:22409797|22410077 hsa-miR-1343-3p 1 0 0
chr22:22409797|22410077 hsa-miR-939-3p 1 0 0
chr22:22409797|22410077 hsa-miR-1226-5p 1 0 0
chr22:22409797|22410077 hsa-miR-4786-3p 1 0 0
chr22:22409797|22410077 hsa-miR-6514-3p 1 0 0
chr22:22409797|22410077 hsa-miR-3677-3p 1 0 0
chr22:22409797|22410077 hsa-miR-7111-3p 1 0 0
chr22:22409797|22410077 hsa-miR-3690 1 0 0
chr22:22409797|22410077 hsa-miR-6742-3p 1 0 0
chr22:22409797|22410077 hsa-miR-6811-3p 1 0 0
chr22:22409797|22410077 hsa-miR-6758-3p 1 0 0
chr22:22409797|22410077 hsa-miR-1914-5p 1 0 0
chr22:22409797|22410077 hsa-miR-212-3p 1 0 0
chr22:22409797|22410077 hsa-miR-4763-3p 1 0 0
chr22:22409797|22410077 hsa-miR-1343-5p 1 0 0
chr22:22409797|22410077 hsa-miR-1237-5p 1 0 0
chr22:22409797|22410077 hsa-miR-6735-5p 1 0 0
chr22:22409797|22410077 hsa-miR-939-5p 1 0 0
chr22:22409797|22410077 hsa-miR-5008-3p 1 0 0
chr22:22409797|22410077 hsa-miR-6724-5p 1 0 0
chr22:22409797|22410077 hsa-miR-7107-3p 1 0 0
chr22:22409797|22410077 hsa-miR-6762-5p 1 0 0
chr22:22409797|22410077 hsa-miR-330-5p 1 0 0
chr22:22409797|22410077 hsa-miR-6783-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:22409797|22410077
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MGPQTLRAAASAQTGPRTLEVGETQASLFGF
Nucleotide Sequence CTGGGGCCCCAGACACTGAGGGCGGCTGCGTCAGCACAGACTGGGCCCAGGACCCTGGAAGTGGGAGAGACACAGGCATCATTATTCGGCTTCTAG
CircID chr22:22409797|22410077
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MDLYPVTCAVSEESEEERRPGHAGDCPE
Nucleotide Sequence CTGGACCTGTATCCAGTCACCTGTGCAGTGAGCGAGGAGAGTGAGGAGGAGAGGAGACCAGGCCATGCTGGAGATTGTCCTGAG
CircID chr22:22409797|22410077
ORF Type ORF3
Protein Length 49
Nucleotide Length 150
Protein Sequence MRQHRLGPGPWKWERHRHHYSASRDNRRKQESIGFPGPLPWTCIQSPVQ
Nucleotide Sequence CTGCGTCAGCACAGACTGGGCCCAGGACCCTGGAAGTGGGAGAGACACAGGCATCATTATTCGGCTTCTAGAGACAACAGGAGAAAGCAAGAATCCATAGGCTTCCCAGGGCCCCTCCCCTGGACCTGTATCCAGTCACCTGTGCAGTGA
CircID chr22:22409797|22410077
ORF Type ORF4
Protein Length 55
Nucleotide Length 168
Protein Sequence MLELLPVQEMVTLCPGAPDTEGGCVSTDWAQDPGSGRDTGIIIRLLETTGESKNP
Nucleotide Sequence ATGTTGGAGCTGCTCCCAGTGCAGGAGATGGTGACCCTCTGCCCTGGGGCCCCAGACACTGAGGGCGGCTGCGTCAGCACAGACTGGGCCCAGGACCCTGGAAGTGGGAGAGACACAGGCATCATTATTCGGCTTCTAGAGACAACAGGAGAAAGCAAGAATCCATAG
CircID chr22:22409797|22410077
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MGPVCADAAALSVWGPRAEGHHLLHWEQLQHRG
Nucleotide Sequence CTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGC
CircID chr22:22409797|22410077
ORF Type ORF6
Protein Length 70
Nucleotide Length 210
Protein Sequence MDTGPGEGPWEAYGFLLSPVVSRSRIMMPVSLPLPGSWAQSVLTQPPSVSGAPGQRVTISCTGSSSNIGA
Nucleotide Sequence CTGGATACAGGTCCAGGGGAGGGGCCCTGGGAAGCCTATGGATTCTTGCTTTCTCCTGTTGTCTCTAGAAGCCGAATAATGATGCCTGTGTCTCTCCCACTTCCAGGGTCCTGGGCCCAGTCTGTGCTGACGCAGCCGCCCTCAGTGTCTGGGGCCCCAGGGCAGAGGGTCACCATCTCCTGCACTGGGAGCAGCTCCAACATCGGGGCA
CircID chr22:22409797|22410077
ORF Type ORF7
Protein Length 42
Nucleotide Length 129
Protein Sequence MAWSPLLLTLLAHCTGDWIQVQGRGPGKPMDSCFLLLSLEAE
Nucleotide Sequence ATGGCCTGGTCTCCTCTCCTCCTCACTCTCCTCGCTCACTGCACAGGTGACTGGATACAGGTCCAGGGGAGGGGCCCTGGGAAGCCTATGGATTCTTGCTTTCTCCTGTTGTCTCTAGAAGCCGAATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab