CircRNA Information

General Information
circRNA Basic Information
CircID chr22:22758729|22759002
Strand +
CircType exon
Host Gene ENSG00000207835.1;
Algorism CIRI2;
Sequence CAACGTCACTGCTGGTTCCAGTGCAGGAGATGGTGATCGACTGTCCAGGAGACCCAGACACGGAGGCAGGCTGAGTCAGGGCAGACTGGGCCCAGGACCCTGGAAAGAGGGAGAAACACATGCCAGTGAGTCAGTGCTGGGCCCCGGTGAGCCTGAGGAGCAGGAGACCAAGGATCAGCCCAGAGGTCCCTGAAGCCCCTTCCCTGGAGGCGTCACCTGTGCCCTGAGTGAGGAGGGTGAGGAGCAGCAGAGCCCAGGCCATGGTGGAGATGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:22758729|22759002 hsa-miR-187-5p 0 0 1
chr22:22758729|22759002 hsa-miR-187-3p 0 0 1
chr22:22758729|22759002 hsa-miR-370-5p 0 0 1
chr22:22758729|22759002 hsa-miR-370-3p 0 0 1
chr22:22758729|22759002 hsa-miR-326 0 1 1
chr22:22758729|22759002 hsa-miR-345-5p 0 0 1
chr22:22758729|22759002 hsa-miR-345-3p 0 0 1
chr22:22758729|22759002 hsa-miR-346 1 1 1
chr22:22758729|22759002 hsa-miR-484 0 0 1
chr22:22758729|22759002 hsa-miR-510-5p 0 0 1
chr22:22758729|22759002 hsa-miR-510-3p 0 0 1
chr22:22758729|22759002 hsa-miR-552-5p 0 0 1
chr22:22758729|22759002 hsa-miR-552-3p 0 0 1
chr22:22758729|22759002 hsa-miR-596 1 0 1
chr22:22758729|22759002 hsa-miR-612 1 0 1
chr22:22758729|22759002 hsa-miR-622 0 1 1
chr22:22758729|22759002 hsa-miR-634 0 0 1
chr22:22758729|22759002 hsa-miR-661 1 1 1
chr22:22758729|22759002 hsa-miR-874-5p 0 0 1
chr22:22758729|22759002 hsa-miR-874-3p 0 0 1
chr22:22758729|22759002 hsa-miR-760 0 0 1
chr22:22758729|22759002 hsa-miR-1231 0 1 1
chr22:22758729|22759002 hsa-miR-1266-5p 0 0 1
chr22:22758729|22759002 hsa-miR-1266-3p 0 0 1
chr22:22758729|22759002 hsa-miR-1281 0 0 1
chr22:22758729|22759002 hsa-miR-512-5p 0 0 1
chr22:22758729|22759002 hsa-miR-125a-3p 0 1 1
chr22:22758729|22759002 hsa-miR-296-5p 0 0 1
chr22:22758729|22759002 hsa-miR-193a-5p 0 0 1
chr22:22758729|22759002 hsa-miR-146b-3p 0 0 1
chr22:22758729|22759002 hsa-miR-324-3p 0 0 1
chr22:22758729|22759002 hsa-miR-330-5p 1 1 1
chr22:22758729|22759002 hsa-miR-362-5p 0 0 1
chr22:22758729|22759002 hsa-miR-642 0 0 1
chr22:22758729|22759002 hsa-miR-1285 0 0 1
chr22:22758729|22759002 hsa-miR-762 1 0 0
chr22:22758729|22759002 hsa-miR-1204 1 1 0
chr22:22758729|22759002 hsa-miR-1291 1 0 0
chr22:22758729|22759002 hsa-miR-1538 1 1 0
chr22:22758729|22759002 hsa-miR-1913 1 0 0
chr22:22758729|22759002 hsa-miR-1976 0 1 0
chr22:22758729|22759002 hsa-miR-4326 0 1 0
chr22:22758729|22759002 hsa-miR-4268 0 1 0
chr22:22758729|22759002 hsa-miR-4469 1 1 0
chr22:22758729|22759002 hsa-miR-4507 1 0 0
chr22:22758729|22759002 hsa-miR-4518 0 1 0
chr22:22758729|22759002 hsa-miR-4522 1 0 0
chr22:22758729|22759002 hsa-miR-4530 0 1 0
chr22:22758729|22759002 hsa-miR-1587 1 1 0
chr22:22758729|22759002 hsa-miR-4656 1 0 0
chr22:22758729|22759002 hsa-miR-4688 1 0 0
chr22:22758729|22759002 hsa-miR-4739 1 0 0
chr22:22758729|22759002 hsa-miR-4741 1 0 0
chr22:22758729|22759002 hsa-miR-6069 1 0 0
chr22:22758729|22759002 hsa-miR-6085 0 1 0
chr22:22758729|22759002 hsa-miR-6860 1 0 0
chr22:22758729|22759002 hsa-miR-12128 0 1 0
chr22:22758729|22759002 hsa-miR-18a-3p 0 1 0
chr22:22758729|22759002 hsa-miR-3194-3p 1 1 0
chr22:22758729|22759002 hsa-miR-6747-3p 0 1 0
chr22:22758729|22759002 hsa-miR-149-5p 1 0 0
chr22:22758729|22759002 hsa-miR-27a-5p 1 0 0
chr22:22758729|22759002 hsa-miR-6762-3p 1 1 0
chr22:22758729|22759002 hsa-miR-6727-5p 1 0 0
chr22:22758729|22759002 hsa-miR-6842-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6849-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6787-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6782-5p 1 0 0
chr22:22758729|22759002 hsa-miR-4793-3p 0 1 0
chr22:22758729|22759002 hsa-miR-6728-3p 1 1 0
chr22:22758729|22759002 hsa-miR-6735-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6882-3p 1 0 0
chr22:22758729|22759002 hsa-miR-1343-3p 0 1 0
chr22:22758729|22759002 hsa-miR-939-3p 1 1 0
chr22:22758729|22759002 hsa-miR-6772-3p 0 1 0
chr22:22758729|22759002 hsa-miR-1226-5p 1 0 0
chr22:22758729|22759002 hsa-miR-4793-5p 1 0 0
chr22:22758729|22759002 hsa-miR-4763-5p 1 0 0
chr22:22758729|22759002 hsa-miR-3944-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6803-3p 1 0 0
chr22:22758729|22759002 hsa-miR-5001-3p 0 1 0
chr22:22758729|22759002 hsa-miR-4638-3p 0 1 0
chr22:22758729|22759002 hsa-miR-378a-5p 1 0 0
chr22:22758729|22759002 hsa-miR-4732-3p 1 1 0
chr22:22758729|22759002 hsa-miR-6867-3p 0 1 0
chr22:22758729|22759002 hsa-miR-1910-5p 1 0 0
chr22:22758729|22759002 hsa-miR-670-3p 1 0 0
chr22:22758729|22759002 hsa-miR-383-3p 0 1 0
chr22:22758729|22759002 hsa-miR-6741-3p 0 1 0
chr22:22758729|22759002 hsa-miR-3605-3p 0 1 0
chr22:22758729|22759002 hsa-miR-6865-3p 0 1 0
chr22:22758729|22759002 hsa-miR-653-3p 0 1 0
chr22:22758729|22759002 hsa-miR-4763-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6775-5p 1 0 0
chr22:22758729|22759002 hsa-miR-6743-5p 1 0 0
chr22:22758729|22759002 hsa-miR-6813-5p 0 1 0
chr22:22758729|22759002 hsa-miR-6754-3p 1 1 0
chr22:22758729|22759002 hsa-miR-3620-5p 1 1 0
chr22:22758729|22759002 hsa-miR-5189-5p 1 0 0
chr22:22758729|22759002 hsa-miR-5196-5p 1 1 0
chr22:22758729|22759002 hsa-miR-1909-3p 1 0 0
chr22:22758729|22759002 hsa-miR-4745-3p 1 1 0
chr22:22758729|22759002 hsa-miR-6773-5p 0 1 0
chr22:22758729|22759002 hsa-miR-6791-3p 1 0 0
chr22:22758729|22759002 hsa-miR-4747-5p 0 1 0
chr22:22758729|22759002 hsa-miR-6724-5p 0 1 0
chr22:22758729|22759002 hsa-miR-6893-3p 1 1 0
chr22:22758729|22759002 hsa-miR-769-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6784-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6862-3p 0 1 0
chr22:22758729|22759002 hsa-miR-10401-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6805-3p 1 1 0
chr22:22758729|22759002 hsa-miR-6783-3p 0 1 0
chr22:22758729|22759002 hsa-miR-6848-3p 0 1 0
chr22:22758729|22759002 hsa-miR-6843-3p 0 1 0
chr22:22758729|22759002 hsa-miR-412-3p 1 0 0
chr22:22758729|22759002 hsa-miR-6874-3p 1 0 0
chr22:22758729|22759002 hsa-miR-4799-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:22758729|22759002
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MSRRPRHGGRLSQGRLGPGPWKEGETHASESVLGPGEPEEQETKDQPRGP
Nucleotide Sequence CTGTCCAGGAGACCCAGACACGGAGGCAGGCTGAGTCAGGGCAGACTGGGCCCAGGACCCTGGAAAGAGGGAGAAACACATGCCAGTGAGTCAGTGCTGGGCCCCGGTGAGCCTGAGGAGCAGGAGACCAAGGATCAGCCCAGAGGTCCCTGA
CircID chr22:22758729|22759002
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MPVSQCWAPVSLRSRRPRISPEVPEAPSLEASPVP
Nucleotide Sequence ATGCCAGTGAGTCAGTGCTGGGCCCCGGTGAGCCTGAGGAGCAGGAGACCAAGGATCAGCCCAGAGGTCCCTGAAGCCCCTTCCCTGGAGGCGTCACCTGTGCCCTGA
CircID chr22:22758729|22759002
ORF Type ORF3
Protein Length 43
Nucleotide Length 132
Protein Sequence MAWALLLLTLLTQGTGDASREGASGTSGLILGLLLLRLTGAQH
Nucleotide Sequence ATGGCCTGGGCTCTGCTGCTCCTCACCCTCCTCACTCAGGGCACAGGTGACGCCTCCAGGGAAGGGGCTTCAGGGACCTCTGGGCTGATCCTTGGTCTCCTGCTCCTCAGGCTCACCGGGGCCCAGCACTGA
CircID chr22:22758729|22759002
ORF Type ORF4
Protein Length 40
Nucleotide Length 120
Protein Sequence MCFSLFPGSWAQSALTQPASVSGSPGQSITISCTGTSSDV
Nucleotide Sequence ATGTGTTTCTCCCTCTTTCCAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGACGTT
CircID chr22:22758729|22759002
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MVSCSSGSPGPSTDSLACVSPSFQGPGPSLP
Nucleotide Sequence TTGGTCTCCTGCTCCTCAGGCTCACCGGGGCCCAGCACTGACTCACTGGCATGTGTTTCTCCCTCTTTCCAGGGTCCTGGGCCCAGTCTGCCCTGA
CircID chr22:22758729|22759002
ORF Type ORF6
Protein Length 42
Nucleotide Length 129
Protein Sequence MTHWHVFLPLSRVLGPVCPDSACLRVWVSWTVDHHLLHWNQQ
Nucleotide Sequence CTGACTCACTGGCATGTGTTTCTCCCTCTTTCCAGGGTCCTGGGCCCAGTCTGCCCTGACTCAGCCTGCCTCCGTGTCTGGGTCTCCTGGACAGTCGATCACCATCTCCTGCACTGGAACCAGCAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab