CircRNA Information

General Information
circRNA Basic Information
CircID chr22:22895386|22895490
Strand +
CircType exon
Host Gene ENSG00000254709.5;
Algorism CIRI2;
Sequence TGTCACAGCTCCCGGGTAGAAGTCACTGATCAGACACACTAGTGTGGCCTTGTTGGCTTGGAGCTCCTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:22895386|22895490 hsa-miR-383-5p 0 0 1
chr22:22895386|22895490 hsa-miR-383-3p 0 0 1
chr22:22895386|22895490 hsa-miR-617 0 0 1
chr22:22895386|22895490 hsa-miR-648 0 0 1
chr22:22895386|22895490 hsa-miR-668-5p 0 0 1
chr22:22895386|22895490 hsa-miR-668-3p 0 0 1
chr22:22895386|22895490 hsa-miR-708-5p 0 0 1
chr22:22895386|22895490 hsa-miR-708-3p 0 0 1
chr22:22895386|22895490 hsa-miR-920 0 1 1
chr22:22895386|22895490 hsa-miR-941 0 0 1
chr22:22895386|22895490 hsa-miR-28-5p 0 1 1
chr22:22895386|22895490 hsa-miR-542-3p 0 0 1
chr22:22895386|22895490 hsa-miR-1976 1 0 0
chr22:22895386|22895490 hsa-miR-3164 0 1 0
chr22:22895386|22895490 hsa-miR-4300 0 1 0
chr22:22895386|22895490 hsa-miR-4290 0 1 0
chr22:22895386|22895490 hsa-miR-3921 0 1 0
chr22:22895386|22895490 hsa-miR-5190 0 1 0
chr22:22895386|22895490 hsa-miR-4697-3p 1 1 0
chr22:22895386|22895490 hsa-miR-7108-3p 1 1 0
chr22:22895386|22895490 hsa-miR-4707-3p 1 0 0
chr22:22895386|22895490 hsa-miR-6894-3p 1 0 0
chr22:22895386|22895490 hsa-miR-6769a-3p 1 0 0
chr22:22895386|22895490 hsa-miR-6743-3p 1 0 0
chr22:22895386|22895490 hsa-miR-584-3p 1 1 0
chr22:22895386|22895490 hsa-miR-4758-3p 1 0 0
chr22:22895386|22895490 hsa-miR-4632-3p 1 0 0
chr22:22895386|22895490 hsa-miR-6773-3p 0 1 0
chr22:22895386|22895490 hsa-miR-6794-3p 0 1 0
chr22:22895386|22895490 hsa-miR-6760-3p 0 1 0
chr22:22895386|22895490 hsa-miR-3664-5p 0 1 0
chr22:22895386|22895490 hsa-miR-6858-5p 1 1 0
chr22:22895386|22895490 hsa-miR-6820-3p 0 1 0
chr22:22895386|22895490 hsa-miR-6505-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr22:22895386|22895490
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MIRHTSVALLAWSSSEEGGNRVTVGL
Nucleotide Sequence CTGATCAGACACACTAGTGTGGCCTTGTTGGCTTGGAGCTCCTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTG

CircID chr22:22895386|22895490
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MFPPSSEELQANKATLVCLISDFYPGAVT
Nucleotide Sequence CTGTTCCCGCCCTCCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites