CircRNA Information

General Information
circRNA Basic Information
CircID chr22:23816790|23816911
Strand +
CircType exon
Host Gene ENSG00000099956.16;
Algorism CIRI2;
Sequence TGGTCCTCCAGGATGCTGTCCGTGGGGTAGGACTCGATCTGCTGTCTGATGGCAGAGGCGATGGCTGGCACAAACGTCAGCGGGTTCAAATCCAGATCGTCACAGAGGATTTCTGAAAACAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:23816790|23816911
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MMAEAMAGTNVSGFKSRSSQRISEN
Nucleotide Sequence CTGATGGCAGAGGCGATGGCTGGCACAAACGTCAGCGGGTTCAAATCCAGATCGTCACAGAGGATTTCTGAAAAC

CircID chr22:23816790|23816911
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MLSDGRGDGWHKRQRVQIQIVTEDF
Nucleotide Sequence CTGCTGTCTGATGGCAGAGGCGATGGCTGGCACAAACGTCAGCGGGTTCAAATCCAGATCGTCACAGAGGATTTCTGA

CircID chr22:23816790|23816911
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILED
Nucleotide Sequence ATGTTTTCAGAAATCCTCTGTGACGATCTGGATTTGAACCCGCTGACGTTTGTGCCAGCCATCGCCTCTGCCATCAGACAGCAGATCGAGTCCTACCCCACGGACAGCATCCTGGAGGAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites