CircRNA Information

General Information
circRNA Basic Information
CircID chr22:23894922|23895194
Strand +
CircType exon
Host Gene ENSG00000251357.4;
Algorism CIRI2;
Sequence CAGAAGGTTGGGGTGGGCGGGCCTAGAACACAGCGTGCGGCGGGTTCCCGGGTGGAGCCAGCGCAGACAGCGTGGGTCCCTGCGGCTCTTAGGCGAAGGTGGAGTTGTTCCAGCCCACATTGGCCGCGTTCATGTCGTAATAGTTGATGTAGACCCTGTCCGGGCTGATGCGCAGGCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:23894922|23895194 hsa-miR-149-5p 0 0 1
chr22:23894922|23895194 hsa-miR-149-3p 0 0 1
chr22:23894922|23895194 hsa-miR-346 0 0 1
chr22:23894922|23895194 hsa-miR-626 0 0 1
chr22:23894922|23895194 hsa-miR-632 0 0 1
chr22:23894922|23895194 hsa-miR-645 0 0 1
chr22:23894922|23895194 hsa-miR-1182 0 0 1
chr22:23894922|23895194 hsa-miR-1237-5p 0 0 1
chr22:23894922|23895194 hsa-miR-1237-3p 0 0 1
chr22:23894922|23895194 hsa-miR-299-3p 0 1 1
chr22:23894922|23895194 hsa-miR-499-3p 0 0 1
chr22:23894922|23895194 hsa-miR-326 1 0 0
chr22:23894922|23895194 hsa-miR-596 1 0 0
chr22:23894922|23895194 hsa-miR-762 1 0 0
chr22:23894922|23895194 hsa-miR-1470 1 0 0
chr22:23894922|23895194 hsa-miR-1539 0 1 0
chr22:23894922|23895194 hsa-miR-4254 1 1 0
chr22:23894922|23895194 hsa-miR-4265 0 1 0
chr22:23894922|23895194 hsa-miR-4498 1 0 0
chr22:23894922|23895194 hsa-miR-4741 1 0 0
chr22:23894922|23895194 hsa-miR-5704 1 0 0
chr22:23894922|23895194 hsa-miR-4747-3p 0 1 0
chr22:23894922|23895194 hsa-miR-1247-3p 0 1 0
chr22:23894922|23895194 hsa-miR-4665-3p 1 0 0
chr22:23894922|23895194 hsa-miR-296-5p 1 0 0
chr22:23894922|23895194 hsa-miR-191-3p 0 1 0
chr22:23894922|23895194 hsa-miR-4711-5p 0 1 0
chr22:23894922|23895194 hsa-miR-6827-5p 1 0 0
chr22:23894922|23895194 hsa-miR-182-3p 0 1 0
chr22:23894922|23895194 hsa-miR-6765-3p 1 0 0
chr22:23894922|23895194 hsa-miR-6858-3p 1 0 0
chr22:23894922|23895194 hsa-miR-939-3p 1 0 0
chr22:23894922|23895194 hsa-miR-4763-5p 1 0 0
chr22:23894922|23895194 hsa-miR-7108-3p 0 1 0
chr22:23894922|23895194 hsa-miR-4707-3p 1 1 0
chr22:23894922|23895194 hsa-miR-6894-3p 1 0 0
chr22:23894922|23895194 hsa-miR-92b-5p 1 0 0
chr22:23894922|23895194 hsa-miR-4783-5p 1 0 0
chr22:23894922|23895194 hsa-miR-3648 1 0 0
chr22:23894922|23895194 hsa-miR-425-3p 1 0 0
chr22:23894922|23895194 hsa-miR-3120-5p 0 1 0
chr22:23894922|23895194 hsa-miR-6869-3p 1 0 0
chr22:23894922|23895194 hsa-miR-2277-5p 1 0 0
chr22:23894922|23895194 hsa-miR-4787-3p 1 0 0
chr22:23894922|23895194 hsa-miR-1207-5p 1 0 0
chr22:23894922|23895194 hsa-miR-4763-3p 1 0 0
chr22:23894922|23895194 hsa-miR-5001-5p 1 0 0
chr22:23894922|23895194 hsa-miR-3620-5p 1 0 0
chr22:23894922|23895194 hsa-miR-1909-3p 1 0 0
chr22:23894922|23895194 hsa-miR-4745-3p 1 0 0
chr22:23894922|23895194 hsa-miR-6724-5p 1 0 0
chr22:23894922|23895194 hsa-miR-6784-3p 0 1 0
chr22:23894922|23895194 hsa-miR-10401-3p 1 0 0
chr22:23894922|23895194 hsa-miR-6876-3p 0 1 0
chr22:23894922|23895194 hsa-miR-412-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:23894922|23895194
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MGWAGLEHSVRRVPGWSQRRQRGSLRLLGEGGVVPAHIGRVHVVIVDVDPVRADAQA
Nucleotide Sequence TTGGGGTGGGCGGGCCTAGAACACAGCGTGCGGCGGGTTCCCGGGTGGAGCCAGCGCAGACAGCGTGGGTCCCTGCGGCTCTTAGGCGAAGGTGGAGTTGTTCCAGCCCACATTGGCCGCGTTCATGTCGTAATAGTTGATGTAGACCCTGTCCGGGCTGATGCGCAGGCG

CircID chr22:23894922|23895194
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MRISPDRVYINYYDMNAANVGWNNSTFA
Nucleotide Sequence CTGCGCATCAGCCCGGACAGGGTCTACATCAACTATTACGACATGAACGCGGCCAATGTGGGCTGGAACAACTCCACCTTCGCCTAA

CircID chr22:23894922|23895194
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MWAGTTPPSPKSRRDPRCLRWLHPGTRRTLCSRPAHPNLL
Nucleotide Sequence ATGTGGGCTGGAACAACTCCACCTTCGCCTAAGAGCCGCAGGGACCCACGCTGTCTGCGCTGGCTCCACCCGGGAACCCGCCGCACGCTGTGTTCTAGGCCCGCCCACCCCAACCTTCTG

CircID chr22:23894922|23895194
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MEQLHLRLRAAGTHAVCAGSTREPAARCVLGPPTPTF
Nucleotide Sequence CTGGAACAACTCCACCTTCGCCTAAGAGCCGCAGGGACCCACGCTGTCTGCGCTGGCTCCACCCGGGAACCCGCCGCACGCTGTGTTCTAGGCCCGCCCACCCCAACCTTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites