CircNet

General Information

circRNA Basic Information

CircID	chr22:24076169\|24098192
Strand	+
CircType	exon
Host Gene	ENSG00000099991.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGATGTCAGAGACGCCCATGCTCCCATCCTCCCTCATGCTGCTGAACACAGCCCACGAGTATTTGGGCAGAAGGTCCTGGTGCTGCAATTCAGATGGGGCTCTGCTGCGATTCTATGTGCGAGTACTCCAGAAGGAACTGGCTGCATCCACCTCTGAAGACACGCACCCTTACAAGGAGGAGCTGGAGACAGCCTTGGAGCAGTGCTTCTACTGCCTGTACAGCTTCCCCAGCAAGAAGAGTAAGGCCAGGTACCTGGAGGAACACTCGGCCCAGCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr22:24076169\|24098192	hsa-miR-187-3p	0	1	1
chr22:24076169\|24098192	hsa-miR-124-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr22:24076169\|24098192
ORF Type	ORF1
Protein Length	92
Nucleotide Length	276
Protein Sequence	MSETPMLPSSLMLLNTAHEYLGRRSWCCNSDGALLRFYVRVLQKELAASTSEDTHPYKEELETALEQCFYCLYSFPSKKSKARYLEEHSAQQ
Nucleotide Sequence	ATGTCAGAGACGCCCATGCTCCCATCCTCCCTCATGCTGCTGAACACAGCCCACGAGTATTTGGGCAGAAGGTCCTGGTGCTGCAATTCAGATGGGGCTCTGCTGCGATTCTATGTGCGAGTACTCCAGAAGGAACTGGCTGCATCCACCTCTGAAGACACGCACCCTTACAAGGAGGAGCTGGAGACAGCCTTGGAGCAGTGCTTCTACTGCCTGTACAGCTTCCCCAGCAAGAAGAGTAAGGCCAGGTACCTGGAGGAACACTCGGCCCAGCAG

CircID	chr22:24076169\|24098192
ORF Type	ORF2
Protein Length	61
Nucleotide Length	183
Protein Sequence	MGLCCDSMCEYSRRNWLHPPLKTRTLTRRSWRQPWSSASTACTASPARRVRPGTWRNTRPS
Nucleotide Sequence	ATGGGGCTCTGCTGCGATTCTATGTGCGAGTACTCCAGAAGGAACTGGCTGCATCCACCTCTGAAGACACGCACCCTTACAAGGAGGAGCTGGAGACAGCCTTGGAGCAGTGCTTCTACTGCCTGTACAGCTTCCCCAGCAAGAAGAGTAAGGCCAGGTACCTGGAGGAACACTCGGCCCAGC

CircID	chr22:24076169\|24098192
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MQPVPSGVLAHRIAAEPHLNCSTRTFCPNTRGLCSAA*
Nucleotide Sequence	ATGCAGCCAGTTCCTTCTGGAGTACTCGCACATAGAATCGCAGCAGAGCCCCATCTGAATTGCAGCACCAGGACCTTCTGCCCAAATACTCGTGGGCTGTGTTCAGCAGCATGA

CircID	chr22:24076169\|24098192
ORF Type	ORF4
Protein Length	59
Nucleotide Length	177
Protein Sequence	VFLQVPGLTLLAGEAVQAVEALLQGCLQLLLVRVRVFRGGCSQFLLEYSHIESQQSPI*
Nucleotide Sequence	GTGTTCCTCCAGGTACCTGGCCTTACTCTTCTTGCTGGGGAAGCTGTACAGGCAGTAGAAGCACTGCTCCAAGGCTGTCTCCAGCTCCTCCTTGTAAGGGTGCGTGTCTTCAGAGGTGGATGCAGCCAGTTCCTTCTGGAGTACTCGCACATAGAATCGCAGCAGAGCCCCATCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr22:24076169\|24098192	NOP56	1	2	2
chr22:24076169\|24098192	ELAVL1	2	1	2
chr22:24076169\|24098192	NUMA1	0	1	0
chr22:24076169\|24098192	SF3B4	2	2	0
chr22:24076169\|24098192	FAM120A	0	2	0
chr22:24076169\|24098192	KHDRBS1	2	0	0
chr22:24076169\|24098192	YTHDF3	1	0	0
chr22:24076169\|24098192	YTHDF2	1	0	0
chr22:24076169\|24098192	YTHDF1	1	0	0
chr22:24076169\|24098192	SRSF10	0	1	0
chr22:24076169\|24098192	TAF15	1	2	0
chr22:24076169\|24098192	FMR1	0	1	4
chr22:24076169\|24098192	TIA1	0	3	0
chr22:24076169\|24098192	FUS	2	8	0
chr22:24076169\|24098192	GNL3	1	1	0
chr22:24076169\|24098192	DGCR8	1	2	0
chr22:24076169\|24098192	NOP58	0	2	2
chr22:24076169\|24098192	U2AF1	0	2	0
chr22:24076169\|24098192	U2AF2	10	3	0
chr22:24076169\|24098192	DDX54	0	15	7
chr22:24076169\|24098192	RBM10	2	2	0
chr22:24076169\|24098192	HNRNPL	0	1	0
chr22:24076169\|24098192	HNRNPA2B1	0	1	0
chr22:24076169\|24098192	SF3A3	1	0	0
chr22:24076169\|24098192	PCBP2	0	1	0
chr22:24076169\|24098192	PTBP1	2	2	0
chr22:24076169\|24098192	HNRNPC	0	2	0
chr22:24076169\|24098192	ZNF184	0	1	0
chr22:24076169\|24098192	ACIN1	0	1	0
chr22:24076169\|24098192	LARP7	1	0	0
chr22:24076169\|24098192	SMNDC1	3	0	0
chr22:24076169\|24098192	AUH	0	2	0
chr22:24076169\|24098192	HNRNPA1	1	5	0
chr22:24076169\|24098192	LIN28B	0	2	0
chr22:24076169\|24098192	FTO	0	1	0
chr22:24076169\|24098192	FXR1	0	0	1
chr22:24076169\|24098192	BCCIP	0	1	0
chr22:24076169\|24098192	RBFOX2	0	36	0
chr22:24076169\|24098192	IGF2BP1	0	1	0
chr22:24076169\|24098192	IGF2BP3	0	2	1
chr22:24076169\|24098192	IGF2BP2	1	6	2
chr22:24076169\|24098192	NPM1	1	0	0
chr22:24076169\|24098192	HNRNPUL1	1	0	0
chr22:24076169\|24098192	TARDBP	0	2	0
chr22:24076169\|24098192	GTF2F1	0	2	0
chr22:24076169\|24098192	KHSRP	0	1	0
chr22:24076169\|24098192	PRPF8	0	3	0
chr22:24076169\|24098192	DDX42	0	1	0
chr22:24076169\|24098192	CSTF2T	0	3	1
chr22:24076169\|24098192	VIM	0	1	0
chr22:24076169\|24098192	RBM27	0	1	0
chr22:24076169\|24098192	RBM22	0	1	0
chr22:24076169\|24098192	XRN2	0	1	0
chr22:24076169\|24098192	AGO2	0	2	0
chr22:24076169\|24098192	AGO1	0	1	0
chr22:24076169\|24098192	EIF4A3	1	6	3
chr22:24076169\|24098192	FBL	0	3	1

CircRNA Information