CircRNA Information

General Information
circRNA Basic Information
CircID chr22:24178086|24178242
Strand -
CircType exon
Host Gene ENSG00000099991.15;
Algorism CIRI2;
Sequence GTGAGGAAGGAGAGCCTATGCCAGCCAGCCCTGGAGGTCCTGGAGACATCCAGCCAGGAGTCCTCGCTGGAGAGCGAGACAGACGAGGACGACGACTACATGGACATTTGAGGGGCCACTGCAGCCCCACCGCCACGCCCCAGGGGACCAGCCAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:24178086|24178242 hsa-miR-611 0 1 1
chr22:24178086|24178242 hsa-miR-766-5p 0 0 1
chr22:24178086|24178242 hsa-miR-766-3p 0 0 1
chr22:24178086|24178242 hsa-miR-665 0 0 1
chr22:24178086|24178242 hsa-miR-663b 0 0 1
chr22:24178086|24178242 hsa-miR-1287-5p 0 0 1
chr22:24178086|24178242 hsa-miR-1287-3p 0 0 1
chr22:24178086|24178242 hsa-miR-331-3p 0 0 1
chr22:24178086|24178242 hsa-miR-105 0 0 1
chr22:24178086|24178242 hsa-miR-1268 0 0 1
chr22:24178086|24178242 hsa-miR-720 0 0 1
chr22:24178086|24178242 hsa-miR-647 1 0 0
chr22:24178086|24178242 hsa-miR-762 1 1 0
chr22:24178086|24178242 hsa-miR-1268a 1 1 0
chr22:24178086|24178242 hsa-miR-2861 1 0 0
chr22:24178086|24178242 hsa-miR-3131 0 1 0
chr22:24178086|24178242 hsa-miR-3196 1 0 0
chr22:24178086|24178242 hsa-miR-4281 1 0 0
chr22:24178086|24178242 hsa-miR-3909 0 1 0
chr22:24178086|24178242 hsa-miR-1268b 1 1 0
chr22:24178086|24178242 hsa-miR-4498 1 1 0
chr22:24178086|24178242 hsa-miR-4507 1 0 0
chr22:24178086|24178242 hsa-miR-1587 1 0 0
chr22:24178086|24178242 hsa-miR-4656 1 0 0
chr22:24178086|24178242 hsa-miR-5090 1 0 0
chr22:24178086|24178242 hsa-miR-5693 0 1 0
chr22:24178086|24178242 hsa-miR-5787 1 0 0
chr22:24178086|24178242 hsa-miR-6131 1 1 0
chr22:24178086|24178242 hsa-miR-8089 1 0 0
chr22:24178086|24178242 hsa-miR-1227-5p 1 0 0
chr22:24178086|24178242 hsa-miR-3064-5p 0 1 0
chr22:24178086|24178242 hsa-miR-4474-3p 1 0 0
chr22:24178086|24178242 hsa-miR-6842-3p 1 1 0
chr22:24178086|24178242 hsa-miR-185-3p 1 1 0
chr22:24178086|24178242 hsa-miR-6829-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6786-5p 1 1 0
chr22:24178086|24178242 hsa-miR-5088-5p 0 1 0
chr22:24178086|24178242 hsa-miR-6853-5p 1 0 0
chr22:24178086|24178242 hsa-miR-3944-3p 1 0 0
chr22:24178086|24178242 hsa-miR-6753-5p 1 0 0
chr22:24178086|24178242 hsa-miR-3127-5p 1 1 0
chr22:24178086|24178242 hsa-miR-296-3p 1 1 0
chr22:24178086|24178242 hsa-miR-6823-5p 1 0 0
chr22:24178086|24178242 hsa-miR-4787-5p 1 0 0
chr22:24178086|24178242 hsa-miR-4446-3p 1 1 0
chr22:24178086|24178242 hsa-miR-6769a-3p 1 0 0
chr22:24178086|24178242 hsa-miR-1238-3p 0 1 0
chr22:24178086|24178242 hsa-miR-6888-3p 0 1 0
chr22:24178086|24178242 hsa-miR-10400-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6816-5p 1 0 0
chr22:24178086|24178242 hsa-miR-5001-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6752-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6756-5p 1 1 0
chr22:24178086|24178242 hsa-miR-6769a-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6803-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6813-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6763-5p 1 0 0
chr22:24178086|24178242 hsa-miR-1915-3p 1 0 0
chr22:24178086|24178242 hsa-miR-3620-5p 1 0 0
chr22:24178086|24178242 hsa-miR-4649-5p 1 0 0
chr22:24178086|24178242 hsa-miR-4685-5p 1 1 0
chr22:24178086|24178242 hsa-miR-6846-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6848-5p 1 0 0
chr22:24178086|24178242 hsa-miR-3940-5p 1 0 0
chr22:24178086|24178242 hsa-miR-6791-5p 1 1 0
chr22:24178086|24178242 hsa-miR-6837-5p 0 1 0
chr22:24178086|24178242 hsa-miR-3085-3p 1 1 0
chr22:24178086|24178242 hsa-miR-6876-3p 1 0 0
chr22:24178086|24178242 hsa-miR-6504-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr22:24178086|24178242
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MEVLETSSQESSLESETDEDDDYMDI
Nucleotide Sequence CTGGAGGTCCTGGAGACATCCAGCCAGGAGTCCTCGCTGGAGAGCGAGACAGACGAGGACGACGACTACATGGACATTTGA
CircID chr22:24178086|24178242
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MPASPGGPGDIQPGVLAGERDRRGRRLHGHLRGHCSPTATPQGTSQ
Nucleotide Sequence ATGCCAGCCAGCCCTGGAGGTCCTGGAGACATCCAGCCAGGAGTCCTCGCTGGAGAGCGAGACAGACGAGGACGACGACTACATGGACATTTGAGGGGCCACTGCAGCCCCACCGCCACGCCCCAGGGGACCAGCCAG
CircID chr22:24178086|24178242
ORF Type ORF3
Protein Length 50
Nucleotide Length 150
Protein Sequence MVPWGVAVGLQWPLKCPCSRRPRLSRSPARTPGWMSPGPPGLAGIGSPSS
Nucleotide Sequence CTGGTCCCCTGGGGCGTGGCGGTGGGGCTGCAGTGGCCCCTCAAATGTCCATGTAGTCGTCGTCCTCGTCTGTCTCGCTCTCCAGCGAGGACTCCTGGCTGGATGTCTCCAGGACCTCCAGGGCTGGCTGGCATAGGCTCTCCTTCCTCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab