CircRNA Information

General Information
circRNA Basic Information
CircID chr22:24187686|24187985
Strand -
CircType exon
Host Gene ENSG00000099994.10;
Algorism CIRI2;
Sequence CACCCTCAACCCCAGCCTGGCACAAGAGGCAGCCAAACTATGTGGGGACGATCATTTCTGCAACTTTGATGTGGCAGCCACTGGGAGCCTGAGCACGGGCACTGCCACTCGGGTGGCCCACCAGCTGCACCAGCGTCGCATGCAGAGCCTGCAGCCAGGTGAGGGCGGGCAGGTGGGGGTGGGCGGGGAGCTGGGACAGGACCCCCCGGGGTGGCCAGATGTGTGTATGCATGGCAGCTCAGGCCTGTTGTCTGCACTCTGTCCCCATCCCAGTGGTGTCCTGTGGCTGGCTGGCCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:24187686|24187985 hsa-miR-22-5p 0 0 1
chr22:24187686|24187985 hsa-miR-22-3p 0 0 1
chr22:24187686|24187985 hsa-miR-34a-5p 0 0 1
chr22:24187686|24187985 hsa-miR-34a-3p 0 0 1
chr22:24187686|24187985 hsa-miR-449a 0 0 1
chr22:24187686|24187985 hsa-miR-484 0 0 1
chr22:24187686|24187985 hsa-miR-520g-5p 0 0 1
chr22:24187686|24187985 hsa-miR-520g-3p 0 0 1
chr22:24187686|24187985 hsa-miR-520h 0 0 1
chr22:24187686|24187985 hsa-miR-558 0 0 1
chr22:24187686|24187985 hsa-miR-581 0 0 1
chr22:24187686|24187985 hsa-miR-588 0 1 1
chr22:24187686|24187985 hsa-miR-603 0 0 1
chr22:24187686|24187985 hsa-miR-604 0 0 1
chr22:24187686|24187985 hsa-miR-647 0 1 1
chr22:24187686|24187985 hsa-miR-449b-5p 0 0 1
chr22:24187686|24187985 hsa-miR-449b-3p 0 0 1
chr22:24187686|24187985 hsa-miR-1301-5p 0 0 1
chr22:24187686|24187985 hsa-miR-1301-3p 0 0 1
chr22:24187686|24187985 hsa-miR-298 0 0 1
chr22:24187686|24187985 hsa-miR-541-5p 0 0 1
chr22:24187686|24187985 hsa-miR-541-3p 0 0 1
chr22:24187686|24187985 hsa-miR-760 0 0 1
chr22:24187686|24187985 hsa-miR-1227-5p 0 0 1
chr22:24187686|24187985 hsa-miR-1227-3p 0 0 1
chr22:24187686|24187985 hsa-miR-1205 0 1 1
chr22:24187686|24187985 hsa-miR-1197 0 0 1
chr22:24187686|24187985 hsa-miR-615-5p 0 0 1
chr22:24187686|24187985 hsa-miR-654-5p 0 1 1
chr22:24187686|24187985 hsa-miR-1224-3p 0 1 1
chr22:24187686|24187985 hsa-miR-1207-3p 0 0 1
chr22:24187686|24187985 hsa-miR-34c-5p 0 0 1
chr22:24187686|24187985 hsa-miR-362-3p 0 0 1
chr22:24187686|24187985 hsa-miR-138 0 0 1
chr22:24187686|24187985 hsa-miR-329 0 0 1
chr22:24187686|24187985 hsa-miR-759 0 1 0
chr22:24187686|24187985 hsa-miR-1183 1 0 0
chr22:24187686|24187985 hsa-miR-1202 1 0 0
chr22:24187686|24187985 hsa-miR-1538 1 0 0
chr22:24187686|24187985 hsa-miR-3155a 0 1 0
chr22:24187686|24187985 hsa-miR-3166 1 1 0
chr22:24187686|24187985 hsa-miR-3943 1 0 0
chr22:24187686|24187985 hsa-miR-3155b 0 1 0
chr22:24187686|24187985 hsa-miR-4489 1 0 0
chr22:24187686|24187985 hsa-miR-4507 1 0 0
chr22:24187686|24187985 hsa-miR-4526 1 0 0
chr22:24187686|24187985 hsa-miR-3972 1 0 0
chr22:24187686|24187985 hsa-miR-4663 0 1 0
chr22:24187686|24187985 hsa-miR-5787 0 1 0
chr22:24187686|24187985 hsa-miR-8079 1 1 0
chr22:24187686|24187985 hsa-miR-10226 1 0 0
chr22:24187686|24187985 hsa-miR-12125 0 1 0
chr22:24187686|24187985 hsa-miR-138-5p 0 1 0
chr22:24187686|24187985 hsa-miR-4731-5p 0 1 0
chr22:24187686|24187985 hsa-miR-4700-3p 1 0 0
chr22:24187686|24187985 hsa-miR-3194-3p 0 1 0
chr22:24187686|24187985 hsa-miR-6879-3p 1 0 0
chr22:24187686|24187985 hsa-miR-6857-5p 0 1 0
chr22:24187686|24187985 hsa-miR-6728-5p 0 1 0
chr22:24187686|24187985 hsa-miR-6089 1 0 0
chr22:24187686|24187985 hsa-miR-3064-5p 0 1 0
chr22:24187686|24187985 hsa-miR-3189-5p 1 0 0
chr22:24187686|24187985 hsa-miR-6787-3p 1 1 0
chr22:24187686|24187985 hsa-miR-486-3p 1 0 0
chr22:24187686|24187985 hsa-miR-6765-3p 0 1 0
chr22:24187686|24187985 hsa-miR-3194-5p 1 1 0
chr22:24187686|24187985 hsa-miR-6810-5p 0 1 0
chr22:24187686|24187985 hsa-miR-5006-5p 0 1 0
chr22:24187686|24187985 hsa-miR-6882-3p 0 1 0
chr22:24187686|24187985 hsa-miR-6858-3p 0 1 0
chr22:24187686|24187985 hsa-miR-3934-3p 0 1 0
chr22:24187686|24187985 hsa-miR-4763-5p 1 1 0
chr22:24187686|24187985 hsa-miR-7108-3p 0 1 0
chr22:24187686|24187985 hsa-miR-4707-3p 1 1 0
chr22:24187686|24187985 hsa-miR-4640-5p 1 1 0
chr22:24187686|24187985 hsa-miR-6803-3p 0 1 0
chr22:24187686|24187985 hsa-miR-4691-3p 0 1 0
chr22:24187686|24187985 hsa-miR-7113-3p 1 1 0
chr22:24187686|24187985 hsa-miR-4756-3p 0 1 0
chr22:24187686|24187985 hsa-miR-6749-5p 1 0 0
chr22:24187686|24187985 hsa-miR-6736-3p 0 1 0
chr22:24187686|24187985 hsa-miR-937-5p 1 0 0
chr22:24187686|24187985 hsa-miR-1306-5p 1 0 0
chr22:24187686|24187985 hsa-miR-6781-5p 1 0 0
chr22:24187686|24187985 hsa-miR-4646-3p 0 1 0
chr22:24187686|24187985 hsa-miR-3944-5p 0 1 0
chr22:24187686|24187985 hsa-miR-4758-3p 1 0 0
chr22:24187686|24187985 hsa-miR-5000-3p 0 1 0
chr22:24187686|24187985 hsa-miR-6748-3p 0 1 0
chr22:24187686|24187985 hsa-miR-4433b-5p 0 1 0
chr22:24187686|24187985 hsa-miR-4797-5p 0 1 0
chr22:24187686|24187985 hsa-miR-1228-3p 1 0 0
chr22:24187686|24187985 hsa-miR-6812-5p 1 0 0
chr22:24187686|24187985 hsa-miR-6816-5p 1 0 0
chr22:24187686|24187985 hsa-miR-1237-5p 1 0 0
chr22:24187686|24187985 hsa-miR-4726-5p 1 0 0
chr22:24187686|24187985 hsa-miR-4745-5p 1 0 0
chr22:24187686|24187985 hsa-miR-6845-5p 1 1 0
chr22:24187686|24187985 hsa-miR-4633-3p 1 0 0
chr22:24187686|24187985 hsa-miR-6511b-5p 0 1 0
chr22:24187686|24187985 hsa-miR-6855-5p 0 1 0
chr22:24187686|24187985 hsa-miR-10398-5p 0 1 0
chr22:24187686|24187985 hsa-miR-6784-3p 0 1 0
chr22:24187686|24187985 hsa-miR-10401-3p 1 0 0
chr22:24187686|24187985 hsa-miR-4701-5p 1 0 0
chr22:24187686|24187985 hsa-miR-10394-5p 0 1 0
chr22:24187686|24187985 hsa-miR-6817-5p 0 1 0
chr22:24187686|24187985 hsa-miR-1234-3p 1 0 0
chr22:24187686|24187985 hsa-miR-3619-5p 1 0 0
chr22:24187686|24187985 hsa-miR-6781-3p 0 1 0
chr22:24187686|24187985 hsa-miR-6504-5p 0 1 0
chr22:24187686|24187985 hsa-miR-6811-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:24187686|24187985
ORF Type ORF1
Protein Length 94
Nucleotide Length 282
Protein Sequence MAQEAAKLCGDDHFCNFDVAATGSLSTGTATRVAHQLHQRRMQSLQPGEGGQVGVGGELGQDPPGWPDVCMHGSSGLLSALCPHPSGVLWLAGP
Nucleotide Sequence CTGGCACAAGAGGCAGCCAAACTATGTGGGGACGATCATTTCTGCAACTTTGATGTGGCAGCCACTGGGAGCCTGAGCACGGGCACTGCCACTCGGGTGGCCCACCAGCTGCACCAGCGTCGCATGCAGAGCCTGCAGCCAGGTGAGGGCGGGCAGGTGGGGGTGGGCGGGGAGCTGGGACAGGACCCCCCGGGGTGGCCAGATGTGTGTATGCATGGCAGCTCAGGCCTGTTGTCTGCACTCTGTCCCCATCCCAGTGGTGTCCTGTGGCTGGCTGGCCCC
CircID chr22:24187686|24187985
ORF Type ORF2
Protein Length 66
Nucleotide Length 198
Protein Sequence MPLGWPTSCTSVACRACSQVRAGRWGWAGSWDRTPRGGQMCVCMAAQACCLHSVPIPVVSCGWLAP
Nucleotide Sequence CTGCCACTCGGGTGGCCCACCAGCTGCACCAGCGTCGCATGCAGAGCCTGCAGCCAGGTGAGGGCGGGCAGGTGGGGGTGGGCGGGGAGCTGGGACAGGACCCCCCGGGGTGGCCAGATGTGTGTATGCATGGCAGCTCAGGCCTGTTGTCTGCACTCTGTCCCCATCCCAGTGGTGTCCTGTGGCTGGCTGGCCCCA
CircID chr22:24187686|24187985
ORF Type ORF3
Protein Length 73
Nucleotide Length 222
Protein Sequence MGWGQSADNRPELPCIHTSGHPGGSCPSSPPTPTCPPSPGCRLCMRRWCSWWATRVAVPVLRLPVAATSKLQK
Nucleotide Sequence CTGGGATGGGGACAGAGTGCAGACAACAGGCCTGAGCTGCCATGCATACACACATCTGGCCACCCCGGGGGGTCCTGTCCCAGCTCCCCGCCCACCCCCACCTGCCCGCCCTCACCTGGCTGCAGGCTCTGCATGCGACGCTGGTGCAGCTGGTGGGCCACCCGAGTGGCAGTGCCCGTGCTCAGGCTCCCAGTGGCTGCCACATCAAAGTTGCAGAAATGA
CircID chr22:24187686|24187985
ORF Type ORF4
Protein Length 78
Nucleotide Length 237
Protein Sequence MSCHAYTHLATPGGPVPAPRPPPPARPHLAAGSACDAGAAGGPPEWQCPCSGSQWLPHQSCRNDRPHIVWLPLVPGWG
Nucleotide Sequence CTGAGCTGCCATGCATACACACATCTGGCCACCCCGGGGGGTCCTGTCCCAGCTCCCCGCCCACCCCCACCTGCCCGCCCTCACCTGGCTGCAGGCTCTGCATGCGACGCTGGTGCAGCTGGTGGGCCACCCGAGTGGCAGTGCCCGTGCTCAGGCTCCCAGTGGCTGCCACATCAAAGTTGCAGAAATGATCGTCCCCACATAGTTTGGCTGCCTCTTGTGCCAGGCTGGGGTTGA
CircID chr22:24187686|24187985
ORF Type ORF5
Protein Length 64
Nucleotide Length 195
Protein Sequence MHTHIWPPRGVLSQLPAHPHLPALTWLQALHATLVQLVGHPSGSARAQAPSGCHIKVAEMIVPT
Nucleotide Sequence ATGCATACACACATCTGGCCACCCCGGGGGGTCCTGTCCCAGCTCCCCGCCCACCCCCACCTGCCCGCCCTCACCTGGCTGCAGGCTCTGCATGCGACGCTGGTGCAGCTGGTGGGCCACCCGAGTGGCAGTGCCCGTGCTCAGGCTCCCAGTGGCTGCCACATCAAAGTTGCAGAAATGATCGTCCCCACATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab