CircRNA Information

General Information
circRNA Basic Information
CircID chr22:24302195|24313466
Strand +
CircType exon
Host Gene ENSG00000258555.6;ENSG00000100014.19;
Algorism find_circ;CIRI2;CIRC
Sequence ATTTGCTTGTAAATGCATCACGAAGAGGCAGCCCAGAATGAAGAAAGCAAGCAGGAGTGTTGGCTCAGTGCCTAAAGTGTCTGCAATAAGTAAAACGCAAACAGCAGAAAAAATTAAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGGAACAGCAGCATCATTGTCAAAGGGTCTCACTCTGTTGCCTAGGCTGGAGTACGGTGGCGTGATCACAGCTCAGTGCAGCTTTGACCTCCCGGGCTCAAGCGATCCTCTCACTTCAACCTTCCCAATAACTAGGACTACAGGCATGTGCCACTTTGCCCAGACCAAGAGCAGTGATGACCTTTTAGCTGGAATGGCCGGAGGGGTAACGGTGACTAATGGTGTTAAAGGAAAGAAAAGCACCTGCCCATCTGCAGCACCTTCAGCATCTGCCCCTGCCATGACCACCGTGGAGAACAAATCCAAGATTAGCACAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:24302195|24313466 hsa-miR-15a-5p 0 0 1
chr22:24302195|24313466 hsa-miR-15a-3p 0 0 1
chr22:24302195|24313466 hsa-miR-17-5p 0 0 1
chr22:24302195|24313466 hsa-miR-17-3p 0 0 1
chr22:24302195|24313466 hsa-miR-20a-5p 0 0 1
chr22:24302195|24313466 hsa-miR-20a-3p 0 0 1
chr22:24302195|24313466 hsa-miR-93-5p 0 0 1
chr22:24302195|24313466 hsa-miR-93-3p 0 0 1
chr22:24302195|24313466 hsa-miR-106a-5p 0 0 1
chr22:24302195|24313466 hsa-miR-106a-3p 0 0 1
chr22:24302195|24313466 hsa-miR-107 0 1 1
chr22:24302195|24313466 hsa-miR-148a-5p 0 0 1
chr22:24302195|24313466 hsa-miR-148a-3p 0 0 1
chr22:24302195|24313466 hsa-miR-15b-5p 0 0 1
chr22:24302195|24313466 hsa-miR-15b-3p 0 0 1
chr22:24302195|24313466 hsa-miR-122-5p 0 0 1
chr22:24302195|24313466 hsa-miR-122-3p 0 0 1
chr22:24302195|24313466 hsa-miR-152-5p 0 0 1
chr22:24302195|24313466 hsa-miR-152-3p 0 0 1
chr22:24302195|24313466 hsa-miR-195-5p 0 0 1
chr22:24302195|24313466 hsa-miR-195-3p 0 0 1
chr22:24302195|24313466 hsa-miR-206 0 0 1
chr22:24302195|24313466 hsa-miR-106b-5p 0 0 1
chr22:24302195|24313466 hsa-miR-106b-3p 0 0 1
chr22:24302195|24313466 hsa-miR-148b-5p 0 0 1
chr22:24302195|24313466 hsa-miR-148b-3p 0 0 1
chr22:24302195|24313466 hsa-miR-335-5p 0 0 1
chr22:24302195|24313466 hsa-miR-335-3p 0 0 1
chr22:24302195|24313466 hsa-miR-346 0 0 1
chr22:24302195|24313466 hsa-miR-424-5p 0 0 1
chr22:24302195|24313466 hsa-miR-424-3p 0 0 1
chr22:24302195|24313466 hsa-miR-20b-5p 0 0 1
chr22:24302195|24313466 hsa-miR-20b-3p 0 0 1
chr22:24302195|24313466 hsa-miR-497-5p 0 0 1
chr22:24302195|24313466 hsa-miR-497-3p 0 0 1
chr22:24302195|24313466 hsa-miR-519e-5p 0 0 1
chr22:24302195|24313466 hsa-miR-519e-3p 0 0 1
chr22:24302195|24313466 hsa-miR-519d-5p 0 0 1
chr22:24302195|24313466 hsa-miR-519d-3p 0 0 1
chr22:24302195|24313466 hsa-miR-570-5p 0 0 1
chr22:24302195|24313466 hsa-miR-570-3p 0 0 1
chr22:24302195|24313466 hsa-miR-613 0 0 1
chr22:24302195|24313466 hsa-miR-619-5p 0 0 1
chr22:24302195|24313466 hsa-miR-619-3p 0 0 1
chr22:24302195|24313466 hsa-miR-632 0 0 1
chr22:24302195|24313466 hsa-miR-650 1 0 1
chr22:24302195|24313466 hsa-miR-922 0 0 1
chr22:24302195|24313466 hsa-miR-1205 0 0 1
chr22:24302195|24313466 hsa-miR-1827 0 1 1
chr22:24302195|24313466 hsa-miR-1184 0 1 1
chr22:24302195|24313466 hsa-miR-490-3p 0 0 1
chr22:24302195|24313466 hsa-miR-324-3p 0 0 1
chr22:24302195|24313466 hsa-miR-515-3p 0 0 1
chr22:24302195|24313466 hsa-miR-103 0 0 1
chr22:24302195|24313466 hsa-miR-16 0 0 1
chr22:24302195|24313466 hsa-miR-1 0 0 1
chr22:24302195|24313466 hsa-miR-24 0 0 1
chr22:24302195|24313466 hsa-miR-198 0 1 0
chr22:24302195|24313466 hsa-miR-449a 1 0 0
chr22:24302195|24313466 hsa-miR-638 1 0 0
chr22:24302195|24313466 hsa-miR-1291 1 0 0
chr22:24302195|24313466 hsa-miR-548k 0 1 0
chr22:24302195|24313466 hsa-miR-1913 0 1 0
chr22:24302195|24313466 hsa-miR-2278 0 1 0
chr22:24302195|24313466 hsa-miR-3154 1 0 0
chr22:24302195|24313466 hsa-miR-3185 1 0 0
chr22:24302195|24313466 hsa-miR-4306 0 1 0
chr22:24302195|24313466 hsa-miR-4321 1 0 0
chr22:24302195|24313466 hsa-miR-3612 1 1 0
chr22:24302195|24313466 hsa-miR-3652 1 0 0
chr22:24302195|24313466 hsa-miR-3659 0 1 0
chr22:24302195|24313466 hsa-miR-3661 1 0 0
chr22:24302195|24313466 hsa-miR-3937 1 0 0
chr22:24302195|24313466 hsa-miR-4430 1 0 0
chr22:24302195|24313466 hsa-miR-3135b 1 0 0
chr22:24302195|24313466 hsa-miR-4470 0 1 0
chr22:24302195|24313466 hsa-miR-3960 1 0 0
chr22:24302195|24313466 hsa-miR-3978 1 0 0
chr22:24302195|24313466 hsa-miR-4675 1 0 0
chr22:24302195|24313466 hsa-miR-4688 1 0 0
chr22:24302195|24313466 hsa-miR-5090 1 0 0
chr22:24302195|24313466 hsa-miR-5190 1 0 0
chr22:24302195|24313466 hsa-miR-5194 1 0 0
chr22:24302195|24313466 hsa-miR-6081 1 0 0
chr22:24302195|24313466 hsa-miR-6125 1 0 0
chr22:24302195|24313466 hsa-miR-6165 0 1 0
chr22:24302195|24313466 hsa-miR-8060 1 1 0
chr22:24302195|24313466 hsa-miR-12119 1 0 0
chr22:24302195|24313466 hsa-miR-4433b-3p 1 0 0
chr22:24302195|24313466 hsa-miR-4433a-3p 0 1 0
chr22:24302195|24313466 hsa-miR-6765-5p 1 0 0
chr22:24302195|24313466 hsa-miR-671-5p 1 0 0
chr22:24302195|24313466 hsa-miR-210-5p 0 1 0
chr22:24302195|24313466 hsa-miR-6728-5p 1 0 0
chr22:24302195|24313466 hsa-miR-139-3p 1 0 0
chr22:24302195|24313466 hsa-miR-6089 1 0 0
chr22:24302195|24313466 hsa-miR-3192-5p 1 0 0
chr22:24302195|24313466 hsa-miR-7847-3p 1 0 0
chr22:24302195|24313466 hsa-miR-4695-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4722-5p 1 1 0
chr22:24302195|24313466 hsa-miR-4655-5p 1 0 0
chr22:24302195|24313466 hsa-miR-7108-5p 1 0 0
chr22:24302195|24313466 hsa-miR-491-5p 1 1 0
chr22:24302195|24313466 hsa-miR-486-3p 1 0 0
chr22:24302195|24313466 hsa-miR-6760-5p 1 0 0
chr22:24302195|24313466 hsa-miR-2467-3p 1 0 0
chr22:24302195|24313466 hsa-miR-6782-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6835-5p 1 0 0
chr22:24302195|24313466 hsa-miR-185-5p 1 1 0
chr22:24302195|24313466 hsa-miR-5001-3p 0 1 0
chr22:24302195|24313466 hsa-miR-6771-5p 1 0 0
chr22:24302195|24313466 hsa-let-7b-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4743-5p 1 1 0
chr22:24302195|24313466 hsa-miR-103a-3p 0 1 0
chr22:24302195|24313466 hsa-miR-6824-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4694-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6781-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6804-3p 0 1 0
chr22:24302195|24313466 hsa-miR-4746-3p 1 0 0
chr22:24302195|24313466 hsa-miR-598-5p 1 0 0
chr22:24302195|24313466 hsa-miR-34a-5p 1 0 0
chr22:24302195|24313466 hsa-miR-1207-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6812-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6722-3p 1 0 0
chr22:24302195|24313466 hsa-miR-6797-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6879-5p 1 0 0
chr22:24302195|24313466 hsa-miR-3620-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4728-5p 1 0 0
chr22:24302195|24313466 hsa-miR-328-5p 1 0 0
chr22:24302195|24313466 hsa-miR-449c-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4632-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4726-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6738-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6795-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4723-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6885-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6511b-5p 1 0 0
chr22:24302195|24313466 hsa-miR-377-5p 1 0 0
chr22:24302195|24313466 hsa-miR-3116 1 0 0
chr22:24302195|24313466 hsa-miR-6877-3p 1 0 0
chr22:24302195|24313466 hsa-miR-3173-3p 1 0 0
chr22:24302195|24313466 hsa-miR-6785-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4722-3p 1 1 0
chr22:24302195|24313466 hsa-miR-6727-3p 0 1 0
chr22:24302195|24313466 hsa-miR-6801-3p 0 1 0
chr22:24302195|24313466 hsa-miR-449b-5p 1 0 0
chr22:24302195|24313466 hsa-miR-6817-5p 0 1 0
chr22:24302195|24313466 hsa-miR-3619-5p 1 0 0
chr22:24302195|24313466 hsa-miR-4690-3p 0 1 0
chr22:24302195|24313466 hsa-miR-6835-3p 0 1 0
chr22:24302195|24313466 hsa-miR-518a-3p 0 1 0
chr22:24302195|24313466 hsa-miR-498-3p 0 1 0
chr22:24302195|24313466 hsa-miR-4659a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr22:24302195|24313466
ORF Type ORF1
Protein Length 111
Nucleotide Length 333
Protein Sequence MDLFSTVVMAGADAEGAADGQVLFFPLTPLVTVTPPAIPAKRSSLLLVFDNDAAVPGFTSLPPVDAEELFSGLIFSAVCVLLIADTLGTEPTLLLAFFILGCLFVMHLQAN
Nucleotide Sequence TTGGATTTGTTCTCCACGGTGGTCATGGCAGGGGCAGATGCTGAAGGTGCTGCAGATGGGCAGGTGCTTTTCTTTCCTTTAACACCATTAGTCACCGTTACCCCTCCGGCCATTCCAGCTAAAAGGTCATCACTGCTCTTGGTCTTTGACAATGATGCTGCTGTTCCAGGTTTTACAAGTTTGCCTCCCGTAGATGCTGAAGAGCTGTTTTCAGGTTTAATTTTTTCTGCTGTTTGCGTTTTACTTATTGCAGACACTTTAGGCACTGAGCCAACACTCCTGCTTGCTTTCTTCATTCTGGGCTGCCTCTTCGTGATGCATTTACAAGCAAAT
CircID chr22:24302195|24313466
ORF Type ORF2
Protein Length 102
Nucleotide Length 306
Protein Sequence MKKASRSVGSVPKVSAISKTQTAEKIKPENSSSASTGGKLVKPGTAASLSKTKSSDDLLAGMAGGVTVTNGVKGKKSTCPSAAPSASAPAMTTVENKSKIST
Nucleotide Sequence ATGAAGAAAGCAAGCAGGAGTGTTGGCTCAGTGCCTAAAGTGTCTGCAATAAGTAAAACGCAAACAGCAGAAAAAATTAAACCTGAAAACAGCTCTTCAGCATCTACGGGAGGCAAACTTGTAAAACCTGGAACAGCAGCATCATTGTCAAAGACCAAGAGCAGTGATGACCTTTTAGCTGGAATGGCCGGAGGGGTAACGGTGACTAATGGTGTTAAAGGAAAGAAAAGCACCTGCCCATCTGCAGCACCTTCAGCATCTGCCCCTGCCATGACCACCGTGGAGAACAAATCCAAGATTAGCACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr22:24302195|24313466 NOP56 1 0 0
chr22:24302195|24313466 MOV10 0 0 1
chr22:24302195|24313466 ELAVL1 0 0 2
chr22:24302195|24313466 FAM120A 0 0 1
chr22:24302195|24313466 PRPF8 0 1 0
chr22:24302195|24313466 FMR1 1 0 2
chr22:24302195|24313466 CPSF6 0 0 1
chr22:24302195|24313466 SRSF1 0 0 3
chr22:24302195|24313466 NOP58 2 0 4
chr22:24302195|24313466 ADAR 1 0 0
chr22:24302195|24313466 U2AF2 3 2 3
chr22:24302195|24313466 DDX54 1 0 6
chr22:24302195|24313466 HNRNPL 1 0 0
chr22:24302195|24313466 SF3A3 1 0 0
chr22:24302195|24313466 HNRNPC 0 1 0
chr22:24302195|24313466 TRA2A 0 0 3
chr22:24302195|24313466 DDX3X 1 0 1
chr22:24302195|24313466 LARP7 0 0 1
chr22:24302195|24313466 SMNDC1 0 1 0
chr22:24302195|24313466 IGF2BP2 2 1 12
chr22:24302195|24313466 TARDBP 0 1 0
chr22:24302195|24313466 BUD13 0 0 1
chr22:24302195|24313466 CSTF2T 0 0 4
chr22:24302195|24313466 TARBP2 0 0 1
chr22:24302195|24313466 FBL 2 0 1
chr22:24302195|24313466 EIF4A3 2 1 5
chr22:24302195|24313466 AGO2 1 0 1
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab