CircRNA Information

General Information
circRNA Basic Information
CircID chr22:27910964|27914347
Strand -
CircType exon
Host Gene ENSG00000180957.17;
Algorism find_circ;CIRI2;DCC;
Sequence CCGTGTGGTTTTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCTTTACTCTGTTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTTATGAGAAGGATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:27910964|27914347 hsa-miR-144-5p 0 0 1
chr22:27910964|27914347 hsa-miR-144-3p 0 0 1
chr22:27910964|27914347 hsa-miR-186-5p 0 0 1
chr22:27910964|27914347 hsa-miR-186-3p 0 0 1
chr22:27910964|27914347 hsa-miR-573 0 0 1
chr22:27910964|27914347 hsa-miR-583 0 0 1
chr22:27910964|27914347 hsa-miR-1264 0 0 1
chr22:27910964|27914347 hsa-miR-298 0 1 1
chr22:27910964|27914347 hsa-miR-1253 0 0 1
chr22:27910964|27914347 hsa-miR-1267 0 0 1
chr22:27910964|27914347 hsa-miR-1276 0 0 1
chr22:27910964|27914347 hsa-miR-1252-5p 0 0 1
chr22:27910964|27914347 hsa-miR-1252-3p 0 0 1
chr22:27910964|27914347 hsa-miR-628-3p 0 1 1
chr22:27910964|27914347 hsa-miR-876-3p 0 0 1
chr22:27910964|27914347 hsa-miR-521 0 0 1
chr22:27910964|27914347 hsa-miR-323-5p 0 0 1
chr22:27910964|27914347 hsa-miR-1300 0 0 1
chr22:27910964|27914347 hsa-miR-184 1 0 0
chr22:27910964|27914347 hsa-miR-765 1 0 0
chr22:27910964|27914347 hsa-miR-2861 1 0 0
chr22:27910964|27914347 hsa-miR-3147 1 1 0
chr22:27910964|27914347 hsa-miR-3154 1 0 0
chr22:27910964|27914347 hsa-miR-1193 1 0 0
chr22:27910964|27914347 hsa-miR-4298 1 0 0
chr22:27910964|27914347 hsa-miR-4306 1 0 0
chr22:27910964|27914347 hsa-miR-3652 1 0 0
chr22:27910964|27914347 hsa-miR-4463 1 1 0
chr22:27910964|27914347 hsa-miR-4476 1 0 0
chr22:27910964|27914347 hsa-miR-2392 1 1 0
chr22:27910964|27914347 hsa-miR-4516 1 0 0
chr22:27910964|27914347 hsa-miR-4533 1 0 0
chr22:27910964|27914347 hsa-miR-4534 1 1 0
chr22:27910964|27914347 hsa-miR-4689 1 0 0
chr22:27910964|27914347 hsa-miR-4739 1 0 0
chr22:27910964|27914347 hsa-miR-5090 1 0 0
chr22:27910964|27914347 hsa-miR-5703 1 0 0
chr22:27910964|27914347 hsa-miR-5787 1 0 0
chr22:27910964|27914347 hsa-miR-6086 1 0 0
chr22:27910964|27914347 hsa-miR-6124 1 0 0
chr22:27910964|27914347 hsa-miR-6745 1 0 0
chr22:27910964|27914347 hsa-miR-8052 1 0 0
chr22:27910964|27914347 hsa-miR-8082 1 0 0
chr22:27910964|27914347 hsa-miR-8085 1 0 0
chr22:27910964|27914347 hsa-miR-12114 1 0 0
chr22:27910964|27914347 hsa-miR-12118 1 0 0
chr22:27910964|27914347 hsa-miR-134-5p 1 0 0
chr22:27910964|27914347 hsa-miR-4433b-3p 1 0 0
chr22:27910964|27914347 hsa-miR-4433a-3p 1 1 0
chr22:27910964|27914347 hsa-miR-6765-5p 1 0 0
chr22:27910964|27914347 hsa-miR-7106-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6894-5p 1 1 0
chr22:27910964|27914347 hsa-miR-4687-3p 1 0 0
chr22:27910964|27914347 hsa-miR-6728-5p 1 0 0
chr22:27910964|27914347 hsa-miR-8071 1 0 0
chr22:27910964|27914347 hsa-miR-766-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6089 1 0 0
chr22:27910964|27914347 hsa-miR-6757-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6880-5p 1 1 0
chr22:27910964|27914347 hsa-miR-7847-3p 1 0 0
chr22:27910964|27914347 hsa-miR-6730-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6806-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6721-5p 1 0 0
chr22:27910964|27914347 hsa-miR-197-5p 1 0 0
chr22:27910964|27914347 hsa-miR-3605-5p 1 1 0
chr22:27910964|27914347 hsa-miR-6798-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6770-5p 1 1 0
chr22:27910964|27914347 hsa-miR-3126-5p 1 1 0
chr22:27910964|27914347 hsa-miR-486-3p 1 0 0
chr22:27910964|27914347 hsa-miR-6760-5p 1 0 0
chr22:27910964|27914347 hsa-miR-2467-3p 1 0 0
chr22:27910964|27914347 hsa-miR-6810-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6786-5p 1 0 0
chr22:27910964|27914347 hsa-miR-185-5p 1 0 0
chr22:27910964|27914347 hsa-miR-204-3p 1 0 0
chr22:27910964|27914347 hsa-miR-1229-5p 1 0 0
chr22:27910964|27914347 hsa-miR-1908-5p 1 0 0
chr22:27910964|27914347 hsa-miR-296-3p 1 0 0
chr22:27910964|27914347 hsa-miR-6771-5p 1 0 0
chr22:27910964|27914347 hsa-miR-92b-5p 1 0 0
chr22:27910964|27914347 hsa-miR-485-5p 1 0 0
chr22:27910964|27914347 hsa-miR-149-3p 1 0 0
chr22:27910964|27914347 hsa-miR-3162-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6864-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6895-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6870-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6893-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6743-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6756-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6769a-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6803-5p 1 0 0
chr22:27910964|27914347 hsa-miR-11181-3p 1 0 0
chr22:27910964|27914347 hsa-miR-1249-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6722-3p 1 0 0
chr22:27910964|27914347 hsa-miR-5196-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6780b-5p 1 0 0
chr22:27910964|27914347 hsa-miR-4632-5p 1 0 0
chr22:27910964|27914347 hsa-miR-4725-3p 1 0 0
chr22:27910964|27914347 hsa-miR-6858-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6883-5p 1 0 0
chr22:27910964|27914347 hsa-miR-939-5p 1 0 0
chr22:27910964|27914347 hsa-miR-3199 1 0 0
chr22:27910964|27914347 hsa-miR-4758-5p 1 0 0
chr22:27910964|27914347 hsa-miR-4769-5p 1 0 0
chr22:27910964|27914347 hsa-miR-3198 0 1 0
chr22:27910964|27914347 hsa-miR-6758-5p 1 0 0
chr22:27910964|27914347 hsa-miR-3173-3p 1 0 0
chr22:27910964|27914347 hsa-miR-4646-5p 1 0 0
chr22:27910964|27914347 hsa-miR-4747-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6876-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6891-5p 1 0 0
chr22:27910964|27914347 hsa-miR-6884-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr22:27910964|27914347
ORF Type ORF1
Protein Length 55
Nucleotide Length 165
Protein Sequence MPCSVQEYQVGQLYSVAEASKNETGGGEGIEVLKNEPYEKDGEKGQYTHKIYHLK
Nucleotide Sequence TTGCCATGTTCTGTTCAGGAGTATCAGGTTGGGCAGCTTTACTCTGTTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAAAGAATGAACCTTATGAGAAGGATGGAGAAAAGGGACAGTATACGCACAAAATTTATCACCTAAAG
CircID chr22:27910964|27914347
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MFRSIRLGSFTLLQKLVRMRLVVEKELKS
Nucleotide Sequence CTGTTCAGGAGTATCAGGTTGGGCAGCTTTACTCTGTTGCAGAAGCTAGTAAGAATGAGACTGGTGGTGGAGAAGGAATTGAAGTCTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr22:27910964|27914347 NOP56 2 3 0
chr22:27910964|27914347 ELAVL1 6 5 2
chr22:27910964|27914347 SF3B4 1 0 0
chr22:27910964|27914347 TBRG4 0 2 0
chr22:27910964|27914347 CNBP 0 0 1
chr22:27910964|27914347 YTHDF1 0 1 0
chr22:27910964|27914347 UPF1 0 1 0
chr22:27910964|27914347 SRSF10 2 0 1
chr22:27910964|27914347 TAF15 2 0 0
chr22:27910964|27914347 FMR1 0 1 1
chr22:27910964|27914347 CPSF6 0 0 1
chr22:27910964|27914347 EIF3H 0 1 0
chr22:27910964|27914347 DGCR8 0 0 1
chr22:27910964|27914347 SRSF7 1 0 0
chr22:27910964|27914347 SRSF1 0 2 5
chr22:27910964|27914347 NOP58 4 0 2
chr22:27910964|27914347 U2AF2 11 21 7
chr22:27910964|27914347 DDX54 0 0 4
chr22:27910964|27914347 RBM10 3 3 0
chr22:27910964|27914347 HNRNPM 0 1 0
chr22:27910964|27914347 FIP1L1 0 1 0
chr22:27910964|27914347 PTBP1 1 0 0
chr22:27910964|27914347 HNRNPC 2 3 0
chr22:27910964|27914347 HNRNPD 0 1 0
chr22:27910964|27914347 TRA2A 0 0 2
chr22:27910964|27914347 HNRNPA1 0 4 1
chr22:27910964|27914347 DDX3X 0 9 0
chr22:27910964|27914347 KHSRP 0 1 0
chr22:27910964|27914347 ACIN1 0 0 2
chr22:27910964|27914347 LIN28B 0 2 0
chr22:27910964|27914347 FXR2 0 0 1
chr22:27910964|27914347 IGF2BP1 0 1 1
chr22:27910964|27914347 DICER1 0 1 0
chr22:27910964|27914347 IGF2BP2 3 4 4
chr22:27910964|27914347 TARDBP 0 1 0
chr22:27910964|27914347 BUD13 0 3 0
chr22:27910964|27914347 RBFOX2 1 1 0
chr22:27910964|27914347 PRPF8 0 2 0
chr22:27910964|27914347 SLTM 0 1 0
chr22:27910964|27914347 RTCB 0 1 0
chr22:27910964|27914347 CSTF2T 0 2 1
chr22:27910964|27914347 TIA1 1 1 0
chr22:27910964|27914347 RBM22 0 1 0
chr22:27910964|27914347 TIAL1 0 1 0
chr22:27910964|27914347 PPIG 0 1 0
chr22:27910964|27914347 AGO2 0 1 0
chr22:27910964|27914347 EIF4A3 4 1 1
chr22:27910964|27914347 FBL 0 1 2
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab