CircNet

General Information

circRNA Basic Information

CircID	chr22:29203247\|29203417
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CTGACGTTTTCACACTTTCCCAGAAGCTCAGACTCTTGAGCCAGAGGGACCTTAAAAGTCCTATGTGGGAGGGTTGCTTGAAGCCAGGAGTTCGAGACCAGCCTGAGCAACAGAGCAAGACCCTGTGTCTACAAAAAATATTAAAAATGAGCCAGATGTGCTGTCATACAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr22:29203247\|29203417	hsa-miR-149-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-149-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-335-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-335-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-425-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-425-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-431-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-431-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-484	0	0	1
chr22:29203247\|29203417	hsa-miR-498-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-498-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-570-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-570-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-595	0	0	1
chr22:29203247\|29203417	hsa-miR-889-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-889-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-1178-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-1178-3p	0	0	1
chr22:29203247\|29203417	hsa-miR-1182	0	1	1
chr22:29203247\|29203417	hsa-miR-1267	0	0	1
chr22:29203247\|29203417	hsa-miR-129-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-532-3p	0	1	1
chr22:29203247\|29203417	hsa-miR-193a-5p	0	0	1
chr22:29203247\|29203417	hsa-miR-188-3p	0	1	1
chr22:29203247\|29203417	hsa-miR-642	0	0	1
chr22:29203247\|29203417	hsa-miR-220c	0	0	1
chr22:29203247\|29203417	hsa-miR-24	0	0	1
chr22:29203247\|29203417	hsa-miR-4526	1	1	0
chr22:29203247\|29203417	hsa-miR-5691	0	1	0
chr22:29203247\|29203417	hsa-miR-3194-3p	1	0	0
chr22:29203247\|29203417	hsa-miR-6854-5p	1	0	0
chr22:29203247\|29203417	hsa-miR-6842-3p	1	0	0
chr22:29203247\|29203417	hsa-miR-3934-3p	0	1	0
chr22:29203247\|29203417	hsa-miR-1226-5p	1	0	0
chr22:29203247\|29203417	hsa-miR-3944-3p	1	1	0
chr22:29203247\|29203417	hsa-miR-2277-3p	1	0	0
chr22:29203247\|29203417	hsa-miR-5580-5p	1	1	0
chr22:29203247\|29203417	hsa-miR-642a-5p	0	1	0
chr22:29203247\|29203417	hsa-miR-5007-5p	0	1	0
chr22:29203247\|29203417	hsa-miR-15a-5p	1	0	0
chr22:29203247\|29203417	hsa-miR-15b-5p	1	0	0
chr22:29203247\|29203417	hsa-miR-5001-5p	1	0	0
chr22:29203247\|29203417	hsa-miR-497-5p	1	0	0
chr22:29203247\|29203417	hsa-miR-6843-3p	0	1	0
chr22:29203247\|29203417	hsa-miR-3117-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr22:29203247\|29203417
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MSQRDLKSPMWEGCLKPGVRDQPEQQSKTLCLQKILKMSQMCCHT
Nucleotide Sequence	TTGAGCCAGAGGGACCTTAAAAGTCCTATGTGGGAGGGTTGCTTGAAGCCAGGAGTTCGAGACCAGCCTGAGCAACAGAGCAAGACCCTGTGTCTACAAAAAATATTAAAAATGAGCCAGATGTGCTGTCATACA

CircID	chr22:29203247\|29203417
ORF Type	ORF2
Protein Length	37
Nucleotide Length	111
Protein Sequence	MLLRLVSNSWLQATLPHRTFKVPLAQESELLGKCENV
Nucleotide Sequence	CTGTTGCTCAGGCTGGTCTCGAACTCCTGGCTTCAAGCAACCCTCCCACATAGGACTTTTAAGGTCCCTCTGGCTCAAGAGTCTGAGCTTCTGGGAAAGTGTGAAAACGTC

CircID	chr22:29203247\|29203417
ORF Type	ORF3
Protein Length	39
Nucleotide Length	117
Protein Sequence	MLCCSGWSRTPGFKQPSHIGLLRSLWLKSLSFWESVKTS
Nucleotide Sequence	TTGCTCTGTTGCTCAGGCTGGTCTCGAACTCCTGGCTTCAAGCAACCCTCCCACATAGGACTTTTAAGGTCCCTCTGGCTCAAGAGTCTGAGCTTCTGGGAAAGTGTGAAAACGTCA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information