CircRNA Information

General Information
circRNA Basic Information
CircID chr22:29290301|29290510
Strand +
CircType exon
Host Gene ENSG00000182944.16;
Algorism CIRI2;
Sequence ACCGTGTCTAGTCCCACTTTTCATTATGCTGCCGGCTGAGTACTGAGTACGGGTACTTTTTAAGTATTGAAGTGTATACAAGGCTCTCACTTTGTAACCTGTAGCATATAAATGCGACAAAGCATGTTAAAAAGTTTCCACGTTTAACAGCCAATGAAAATATCAAAATACTGAGGCAATGAAAAAGGGCATGTTAACAACATTGAGTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr22:29290301|29290510 hsa-miR-99a-5p 0 0 1
chr22:29290301|29290510 hsa-miR-99a-3p 0 0 1
chr22:29290301|29290510 hsa-miR-100-5p 0 0 1
chr22:29290301|29290510 hsa-miR-100-3p 0 0 1
chr22:29290301|29290510 hsa-miR-107 0 0 1
chr22:29290301|29290510 hsa-miR-221-5p 0 0 1
chr22:29290301|29290510 hsa-miR-221-3p 0 0 1
chr22:29290301|29290510 hsa-miR-222-5p 0 0 1
chr22:29290301|29290510 hsa-miR-222-3p 0 0 1
chr22:29290301|29290510 hsa-miR-99b-5p 0 0 1
chr22:29290301|29290510 hsa-miR-99b-3p 0 0 1
chr22:29290301|29290510 hsa-miR-520g-5p 0 0 1
chr22:29290301|29290510 hsa-miR-520g-3p 0 0 1
chr22:29290301|29290510 hsa-miR-520h 0 0 1
chr22:29290301|29290510 hsa-miR-510-5p 0 0 1
chr22:29290301|29290510 hsa-miR-510-3p 0 0 1
chr22:29290301|29290510 hsa-miR-552-5p 0 0 1
chr22:29290301|29290510 hsa-miR-552-3p 0 0 1
chr22:29290301|29290510 hsa-miR-568 0 0 1
chr22:29290301|29290510 hsa-miR-643 0 0 1
chr22:29290301|29290510 hsa-miR-647 0 0 1
chr22:29290301|29290510 hsa-miR-938 0 0 1
chr22:29290301|29290510 hsa-miR-548k 0 0 1
chr22:29290301|29290510 hsa-miR-548n 0 0 1
chr22:29290301|29290510 hsa-miR-512-5p 0 0 1
chr22:29290301|29290510 hsa-miR-524-5p 0 0 1
chr22:29290301|29290510 hsa-miR-409-3p 0 0 1
chr22:29290301|29290510 hsa-miR-520d-5p 0 0 1
chr22:29290301|29290510 hsa-miR-103 0 0 1
chr22:29290301|29290510 hsa-miR-1259 0 0 1
chr22:29290301|29290510 hsa-miR-3960 1 0 0
chr22:29290301|29290510 hsa-miR-4648 0 1 0
chr22:29290301|29290510 hsa-miR-4687-3p 1 1 0
chr22:29290301|29290510 hsa-miR-885-3p 1 0 0
chr22:29290301|29290510 hsa-miR-103a-3p 0 1 0
chr22:29290301|29290510 hsa-miR-4796-3p 0 1 0
chr22:29290301|29290510 hsa-miR-10400-5p 1 0 0
chr22:29290301|29290510 hsa-miR-9851-5p 1 0 0
chr22:29290301|29290510 hsa-miR-10394-5p 1 0 0
chr22:29290301|29290510 hsa-miR-6781-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr22:29290301|29290510
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MSHLYATGYKVRALYTLQYLKSTRTQYSAGSIMKSGTRHG
Nucleotide Sequence TTGTCGCATTTATATGCTACAGGTTACAAAGTGAGAGCCTTGTATACACTTCAATACTTAAAAAGTACCCGTACTCAGTACTCAGCCGGCAGCATAATGAAAAGTGGGACTAGACACGGT

CircID chr22:29290301|29290510
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MIFSLAVKRGNFLTCFVAFICYRLQSESLVYTSILKKYPYSVLSRQHNEKWD
Nucleotide Sequence TTGATATTTTCATTGGCTGTTAAACGTGGAAACTTTTTAACATGCTTTGTCGCATTTATATGCTACAGGTTACAAAGTGAGAGCCTTGTATACACTTCAATACTTAAAAAGTACCCGTACTCAGTACTCAGCCGGCAGCATAATGAAAAGTGGGACTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites